Protein–RNA interactions for Protein: P97471

Smad4, Mothers against decapentaplegic homolog 4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smad4P97471 Gm24431-201ENSMUST00000104073 66 ntBASIC1.1□□□□□ -2.23
Smad4P97471 Gm22095-201ENSMUST00000158984 150 ntBASIC1.1□□□□□ -2.23
Smad4P97471 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.1□□□□□ -2.23
Smad4P97471 Mir126a-201ENSMUST00000083606 73 ntBASIC1.1□□□□□ -2.23
Smad4P97471 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Smad4P97471 Gm23306-201ENSMUST00000179058 105 ntBASIC1.09□□□□□ -2.23
Smad4P97471 Mir6381-201ENSMUST00000183426 87 ntBASIC1.09□□□□□ -2.23
Smad4P97471 Gm24579-201ENSMUST00000103964 144 ntBASIC1.08□□□□□ -2.24
Smad4P97471 Gm23203-201ENSMUST00000104374 107 ntBASIC1.08□□□□□ -2.24
Smad4P97471 Gm13065-201ENSMUST00000119178 141 ntBASIC1.08□□□□□ -2.24
Smad4P97471 Gm24865-201ENSMUST00000103246 96 ntBASIC1.07□□□□□ -2.24
Smad4P97471 Gm24233-201ENSMUST00000104317 122 ntBASIC1.07□□□□□ -2.24
Smad4P97471 Gm24777-201ENSMUST00000157644 107 ntBASIC1.07□□□□□ -2.24
Smad4P97471 Gm23500-201ENSMUST00000157735 98 ntBASIC1.07□□□□□ -2.24
Smad4P97471 Gm22520-201ENSMUST00000158269 129 ntBASIC1.07□□□□□ -2.24
Smad4P97471 Gm22652-201ENSMUST00000083207 131 ntBASIC1.07□□□□□ -2.24
Smad4P97471 Gm24134-201ENSMUST00000083361 71 ntBASIC1.07□□□□□ -2.24
Smad4P97471 Gm24580-201ENSMUST00000103965 131 ntBASIC1.06□□□□□ -2.24
Smad4P97471 Mir1197-201ENSMUST00000117037 120 ntBASIC1.06□□□□□ -2.24
Smad4P97471 Gm23761-201ENSMUST00000158347 104 ntBASIC1.06□□□□□ -2.24
Smad4P97471 Gm27717-201ENSMUST00000183933 151 ntBASIC1.06□□□□□ -2.24
Smad4P97471 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.05□□□□□ -2.24
Smad4P97471 Mir219b-201ENSMUST00000198317 65 ntBASIC1.05□□□□□ -2.24
Smad4P97471 Gm44211-201ENSMUST00000204867 145 ntBASIC1.05□□□□□ -2.24
Smad4P97471 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
Smad4P97471 Mir22-201ENSMUST00000083595 95 ntBASIC1.05□□□□□ -2.24
Smad4P97471 Gm24920-201ENSMUST00000083018 85 ntBASIC1.04□□□□□ -2.24
Smad4P97471 Mir15a-201ENSMUST00000175266 84 ntBASIC1.03□□□□□ -2.24
Smad4P97471 Gm25300-201ENSMUST00000175284 84 ntBASIC1.03□□□□□ -2.24
Smad4P97471 Gm27549-201ENSMUST00000183508 62 ntBASIC1.03□□□□□ -2.24
Smad4P97471 Gm6293-201ENSMUST00000050339 195 ntBASIC1.03□□□□□ -2.24
Smad4P97471 Gm25138-201ENSMUST00000083248 136 ntBASIC1.03□□□□□ -2.24
Smad4P97471 Gm23012-201ENSMUST00000104149 83 ntBASIC1.02□□□□□ -2.25
Smad4P97471 Mir1904-201ENSMUST00000122702 80 ntBASIC1.02□□□□□ -2.25
Smad4P97471 Gm23826-201ENSMUST00000157394 119 ntBASIC1.02□□□□□ -2.25
Smad4P97471 Gm25328-201ENSMUST00000175013 107 ntBASIC1.02□□□□□ -2.25
Smad4P97471 Gm25247-201ENSMUST00000175475 90 ntBASIC1.02□□□□□ -2.25
Smad4P97471 Gm23416-201ENSMUST00000175520 95 ntBASIC1.02□□□□□ -2.25
Smad4P97471 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.02□□□□□ -2.25
Smad4P97471 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.02□□□□□ -2.25
Smad4P97471 Gm24555-201ENSMUST00000104548 124 ntBASIC1.01□□□□□ -2.25
Smad4P97471 Gm13577-201ENSMUST00000121365 205 ntBASIC1.01□□□□□ -2.25
Smad4P97471 Gm22485-201ENSMUST00000157990 109 ntBASIC1.01□□□□□ -2.25
Smad4P97471 Gm26485-201ENSMUST00000158019 64 ntBASIC1.01□□□□□ -2.25
Smad4P97471 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.01□□□□□ -2.25
Smad4P97471 Mir7010-201ENSMUST00000183464 63 ntBASIC1.01□□□□□ -2.25
Smad4P97471 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1□□□□□ -2.25
Smad4P97471 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1□□□□□ -2.25
Smad4P97471 Gm23785-201ENSMUST00000116741 96 ntBASIC1□□□□□ -2.25
Smad4P97471 Mir33-201ENSMUST00000083531 69 ntBASIC1□□□□□ -2.25
Smad4P97471 Gm25847-201ENSMUST00000116793 96 ntBASIC0.99□□□□□ -2.25
Smad4P97471 Gm11966-201ENSMUST00000119907 87 ntBASIC0.99□□□□□ -2.25
Smad4P97471 Gm23477-201ENSMUST00000158882 128 ntBASIC0.99□□□□□ -2.25
Smad4P97471 Mir3108-201ENSMUST00000175500 79 ntBASIC0.99□□□□□ -2.25
Smad4P97471 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Smad4P97471 Gm23726-201ENSMUST00000178937 67 ntBASIC0.99□□□□□ -2.25
Smad4P97471 Gm25354-201ENSMUST00000179110 105 ntBASIC0.99□□□□□ -2.25
Smad4P97471 Gm27974-201ENSMUST00000183415 105 ntBASIC0.99□□□□□ -2.25
Smad4P97471 Gm25683-201ENSMUST00000083940 131 ntBASIC0.99□□□□□ -2.25
Smad4P97471 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.98□□□□□ -2.25
Smad4P97471 Mir741-201ENSMUST00000103931 71 ntBASIC0.98□□□□□ -2.25
Smad4P97471 n-R5s6-201ENSMUST00000122663 88 ntBASIC0.98□□□□□ -2.25
Smad4P97471 Mir3064-201ENSMUST00000175532 67 ntBASIC0.98□□□□□ -2.25
Smad4P97471 Gm26438-201ENSMUST00000082593 107 ntBASIC0.98□□□□□ -2.25
Smad4P97471 Gm24918-201ENSMUST00000083022 130 ntBASIC0.98□□□□□ -2.25
Smad4P97471 Snord35a-201ENSMUST00000083884 90 ntBASIC0.98□□□□□ -2.25
Smad4P97471 Gm23321-201ENSMUST00000104465 126 ntBASIC0.97□□□□□ -2.25
Smad4P97471 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
Smad4P97471 Gm22431-201ENSMUST00000158545 107 ntBASIC0.97□□□□□ -2.25
Smad4P97471 Snord95-201ENSMUST00000082846 68 ntBASIC0.97□□□□□ -2.25
Smad4P97471 Gm29432-201ENSMUST00000185397 139 ntBASIC0.96□□□□□ -2.26
Smad4P97471 Gm24378-201ENSMUST00000122699 106 ntBASIC0.95□□□□□ -2.26
Smad4P97471 Gm26363-201ENSMUST00000158866 83 ntBASIC0.95□□□□□ -2.26
Smad4P97471 Gm45655-201ENSMUST00000211625 160 ntBASIC0.95□□□□□ -2.26
Smad4P97471 Mir101a-201ENSMUST00000083517 83 ntBASIC0.95□□□□□ -2.26
Smad4P97471 Gm44301-201ENSMUST00000200362 143 ntBASIC0.94□□□□□ -2.26
Smad4P97471 Gm25894-201ENSMUST00000083458 75 ntBASIC0.94□□□□□ -2.26
Smad4P97471 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Smad4P97471 Mir669h-201ENSMUST00000116944 125 ntBASIC0.93□□□□□ -2.26
Smad4P97471 Gm25950-201ENSMUST00000175331 100 ntBASIC0.93□□□□□ -2.26
Smad4P97471 Gm24323-201ENSMUST00000175342 77 ntBASIC0.93□□□□□ -2.26
Smad4P97471 Gm24020-201ENSMUST00000180156 108 ntBASIC0.93□□□□□ -2.26
Smad4P97471 Gm38274-201ENSMUST00000195689 148 ntBASIC0.92□□□□□ -2.26
Smad4P97471 Snord32a-201ENSMUST00000083285 83 ntBASIC0.92□□□□□ -2.26
Smad4P97471 Gm25055-201ENSMUST00000157369 76 ntBASIC0.91□□□□□ -2.26
Smad4P97471 Gm25656-201ENSMUST00000158466 66 ntBASIC0.91□□□□□ -2.26
Smad4P97471 Gm24772-201ENSMUST00000158507 110 ntBASIC0.91□□□□□ -2.26
Smad4P97471 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.91□□□□□ -2.26
Smad4P97471 Gm24321-201ENSMUST00000175348 80 ntBASIC0.91□□□□□ -2.26
Smad4P97471 Gm27587-201ENSMUST00000185116 163 ntBASIC0.91□□□□□ -2.26
Smad4P97471 Gm27607-201ENSMUST00000185162 122 ntBASIC0.91□□□□□ -2.26
Smad4P97471 Gm27937-201ENSMUST00000183605 88 ntBASIC0.9□□□□□ -2.27
Smad4P97471 Gm42677-201ENSMUST00000196363 127 ntBASIC0.9□□□□□ -2.27
Smad4P97471 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.9□□□□□ -2.27
Smad4P97471 Gm22048-201ENSMUST00000104721 89 ntBASIC0.89□□□□□ -2.27
Smad4P97471 Gm24678-201ENSMUST00000158756 104 ntBASIC0.89□□□□□ -2.27
Smad4P97471 Gm20386-201ENSMUST00000174010 132 ntBASIC0.89□□□□□ -2.27
Smad4P97471 Mir3109-201ENSMUST00000175301 88 ntBASIC0.89□□□□□ -2.27
Smad4P97471 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Smad4P97471 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC0.89□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 173.5 ms