Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm22055-201ENSMUST00000083388 107 ntBASIC-0.38□□□□□ -2.47
Traf1P39428 Mir7-1-201ENSMUST00000083500 108 ntBASIC-0.38□□□□□ -2.47
Traf1P39428 Mir297a-2-201ENSMUST00000103795 90 ntBASIC-0.39□□□□□ -2.47
Traf1P39428 Gm23578-201ENSMUST00000103943 104 ntBASIC-0.39□□□□□ -2.47
Traf1P39428 Gm24676-201ENSMUST00000158758 75 ntBASIC-0.39□□□□□ -2.47
Traf1P39428 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.39□□□□□ -2.47
Traf1P39428 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.39□□□□□ -2.47
Traf1P39428 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.39□□□□□ -2.47
Traf1P39428 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
Traf1P39428 Gm22672-201ENSMUST00000104414 134 ntBASIC-0.4□□□□□ -2.47
Traf1P39428 Gm25510-201ENSMUST00000116986 123 ntBASIC-0.4□□□□□ -2.47
Traf1P39428 Gm24384-201ENSMUST00000122693 75 ntBASIC-0.4□□□□□ -2.47
Traf1P39428 Gm25622-201ENSMUST00000157217 104 ntBASIC-0.4□□□□□ -2.47
Traf1P39428 Gm37796-201ENSMUST00000195327 134 ntBASIC-0.4□□□□□ -2.47
Traf1P39428 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.4□□□□□ -2.47
Traf1P39428 Gm23500-201ENSMUST00000157735 98 ntBASIC-0.41□□□□□ -2.48
Traf1P39428 Gm22140-201ENSMUST00000158745 120 ntBASIC-0.41□□□□□ -2.48
Traf1P39428 Gm25646-201ENSMUST00000178527 79 ntBASIC-0.41□□□□□ -2.48
Traf1P39428 Gm27549-201ENSMUST00000183508 62 ntBASIC-0.41□□□□□ -2.48
Traf1P39428 Gm42844-201ENSMUST00000200355 112 ntBASIC-0.41□□□□□ -2.48
Traf1P39428 AC132833.2-201ENSMUST00000228699 157 ntBASIC-0.41□□□□□ -2.48
Traf1P39428 mt-Tv-201ENSMUST00000082389 69 ntBASIC-0.41□□□□□ -2.48
Traf1P39428 Mir369-201ENSMUST00000083627 79 ntBASIC-0.41□□□□□ -2.48
Traf1P39428 Gm24593-201ENSMUST00000122507 106 ntBASIC-0.42□□□□□ -2.48
Traf1P39428 Gm22490-201ENSMUST00000157188 119 ntBASIC-0.42□□□□□ -2.48
Traf1P39428 Gm22770-201ENSMUST00000158368 67 ntBASIC-0.42□□□□□ -2.48
Traf1P39428 Gm25596-201ENSMUST00000178368 107 ntBASIC-0.42□□□□□ -2.48
Traf1P39428 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.42□□□□□ -2.48
Traf1P39428 Gm42677-201ENSMUST00000196363 127 ntBASIC-0.42□□□□□ -2.48
Traf1P39428 CT030166.3-201ENSMUST00000223203 193 ntBASIC-0.42□□□□□ -2.48
Traf1P39428 Mir3071-201ENSMUST00000093621 80 ntBASIC-0.42□□□□□ -2.48
Traf1P39428 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.43□□□□□ -2.48
Traf1P39428 Gm24801-201ENSMUST00000178503 105 ntBASIC-0.43□□□□□ -2.48
Traf1P39428 Mir7673-201ENSMUST00000184567 64 ntBASIC-0.43□□□□□ -2.48
Traf1P39428 Mir145a-201ENSMUST00000083658 70 ntBASIC-0.43□□□□□ -2.48
Traf1P39428 Gm25108-201ENSMUST00000122473 78 ntBASIC-0.44□□□□□ -2.48
Traf1P39428 Gm22842-201ENSMUST00000157709 118 ntBASIC-0.44□□□□□ -2.48
Traf1P39428 Gm20734-201ENSMUST00000216939 193 ntBASIC-0.44□□□□□ -2.48
Traf1P39428 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.45□□□□□ -2.48
Traf1P39428 Gm23261-201ENSMUST00000158316 136 ntBASIC-0.45□□□□□ -2.48
Traf1P39428 Gm23350-201ENSMUST00000158429 103 ntBASIC-0.45□□□□□ -2.48
Traf1P39428 Gm25249-201ENSMUST00000175471 78 ntBASIC-0.45□□□□□ -2.48
Traf1P39428 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.45□□□□□ -2.48
Traf1P39428 Mir466-201ENSMUST00000093591 73 ntBASIC-0.45□□□□□ -2.48
Traf1P39428 Gm27977-201ENSMUST00000185159 111 ntBASIC-0.46□□□□□ -2.48
Traf1P39428 Gm22732-201ENSMUST00000158093 121 ntBASIC-0.47□□□□□ -2.48
Traf1P39428 Gm25920-201ENSMUST00000158307 99 ntBASIC-0.47□□□□□ -2.48
Traf1P39428 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-0.47□□□□□ -2.48
Traf1P39428 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-0.47□□□□□ -2.48
Traf1P39428 Gm24926-201ENSMUST00000178053 79 ntBASIC-0.47□□□□□ -2.48
Traf1P39428 Gm22632-201ENSMUST00000178266 79 ntBASIC-0.47□□□□□ -2.48
Traf1P39428 Snord42b-201ENSMUST00000083742 69 ntBASIC-0.47□□□□□ -2.48
Traf1P39428 Gm25684-201ENSMUST00000083941 107 ntBASIC-0.47□□□□□ -2.48
Traf1P39428 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.48□□□□□ -2.49
Traf1P39428 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.48□□□□□ -2.49
Traf1P39428 Gm23197-201ENSMUST00000158809 112 ntBASIC-0.48□□□□□ -2.49
Traf1P39428 Mir183-201ENSMUST00000083685 70 ntBASIC-0.48□□□□□ -2.49
Traf1P39428 Gm27749-201ENSMUST00000183651 125 ntBASIC-0.49□□□□□ -2.49
Traf1P39428 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC-0.49□□□□□ -2.49
Traf1P39428 Snora62-201ENSMUST00000082991 149 ntBASIC-0.49□□□□□ -2.49
Traf1P39428 Mir103-1-201ENSMUST00000083619 86 ntBASIC-0.49□□□□□ -2.49
Traf1P39428 Mir23a-201ENSMUST00000083677 75 ntBASIC-0.49□□□□□ -2.49
Traf1P39428 Gm26253-201ENSMUST00000122493 103 ntBASIC-0.5□□□□□ -2.49
Traf1P39428 Mir378c-201ENSMUST00000184478 99 ntBASIC-0.5□□□□□ -2.49
Traf1P39428 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-0.5□□□□□ -2.49
Traf1P39428 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.51□□□□□ -2.49
Traf1P39428 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.51□□□□□ -2.49
Traf1P39428 Gm22157-201ENSMUST00000158410 104 ntBASIC-0.51□□□□□ -2.49
Traf1P39428 Gm25472-201ENSMUST00000175454 78 ntBASIC-0.51□□□□□ -2.49
Traf1P39428 Gm20108-201ENSMUST00000219977 153 ntBASIC-0.51□□□□□ -2.49
Traf1P39428 Snord45b-201ENSMUST00000082797 71 ntBASIC-0.51□□□□□ -2.49
Traf1P39428 Mir148a-201ENSMUST00000083571 99 ntBASIC-0.51□□□□□ -2.49
Traf1P39428 Gm25991-201ENSMUST00000102439 99 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm22489-201ENSMUST00000116813 62 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm23494-201ENSMUST00000116830 126 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm25098-201ENSMUST00000177580 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm23356-201ENSMUST00000177610 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm24027-201ENSMUST00000177611 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm22511-201ENSMUST00000177628 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm22630-201ENSMUST00000177781 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm23560-201ENSMUST00000177782 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm25462-201ENSMUST00000177833 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm26059-201ENSMUST00000177865 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm22255-201ENSMUST00000177933 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm25146-201ENSMUST00000177976 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm25523-201ENSMUST00000178044 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm24585-201ENSMUST00000178104 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm22627-201ENSMUST00000178127 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm22912-201ENSMUST00000178242 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm24866-201ENSMUST00000178338 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm22524-201ENSMUST00000178357 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm25710-201ENSMUST00000178367 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm23575-201ENSMUST00000178406 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm24872-201ENSMUST00000178434 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm22449-201ENSMUST00000178924 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm24702-201ENSMUST00000178965 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm24206-201ENSMUST00000179011 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm24528-201ENSMUST00000179164 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm22909-201ENSMUST00000179190 79 ntBASIC-0.52□□□□□ -2.49
Traf1P39428 Gm26334-201ENSMUST00000179403 79 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 201.4 ms