Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Gm2274-201ENSMUST00000184539 609 ntBASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Gm7889-201ENSMUST00000185591 958 ntBASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ccdc30Q8BVF4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ccdc30Q8BVF4 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ccdc30Q8BVF4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Ccdc30Q8BVF4 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 AC159205.6-201ENSMUST00000224935 887 ntBASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Gm10461-201ENSMUST00000202073 4786 ntBASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Spsb2-203ENSMUST00000112473 1322 ntBASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ccdc30Q8BVF4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Gm16061-201ENSMUST00000122167 857 ntBASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc30Q8BVF4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms