Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Pcdha3Q91Y16 Gm25170-201ENSMUST00000104191 129 ntBASIC0.79□□□□□ -2.28
Pcdha3Q91Y16 Gm24073-201ENSMUST00000158177 106 ntBASIC0.79□□□□□ -2.28
Pcdha3Q91Y16 Gm24678-201ENSMUST00000158756 104 ntBASIC0.79□□□□□ -2.28
Pcdha3Q91Y16 Gm20108-201ENSMUST00000219977 153 ntBASIC0.79□□□□□ -2.28
Pcdha3Q91Y16 CT571266.1-201ENSMUST00000222859 153 ntBASIC0.79□□□□□ -2.28
Pcdha3Q91Y16 Gm23203-201ENSMUST00000104374 107 ntBASIC0.78□□□□□ -2.28
Pcdha3Q91Y16 Gm6985-201ENSMUST00000121255 271 ntBASIC0.78□□□□□ -2.28
Pcdha3Q91Y16 Mir3109-201ENSMUST00000175301 88 ntBASIC0.78□□□□□ -2.28
Pcdha3Q91Y16 Gm27717-201ENSMUST00000183933 151 ntBASIC0.78□□□□□ -2.28
Pcdha3Q91Y16 Gm22454-201ENSMUST00000082583 107 ntBASIC0.78□□□□□ -2.28
Pcdha3Q91Y16 Gm22652-201ENSMUST00000083207 131 ntBASIC0.78□□□□□ -2.28
Pcdha3Q91Y16 Gm24233-201ENSMUST00000104317 122 ntBASIC0.77□□□□□ -2.29
Pcdha3Q91Y16 Gm25229-201ENSMUST00000178587 79 ntBASIC0.77□□□□□ -2.29
Pcdha3Q91Y16 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
Pcdha3Q91Y16 Gm22677-201ENSMUST00000116977 108 ntBASIC0.76□□□□□ -2.29
Pcdha3Q91Y16 Gm24384-201ENSMUST00000122693 75 ntBASIC0.76□□□□□ -2.29
Pcdha3Q91Y16 Gm27639-201ENSMUST00000184937 85 ntBASIC0.76□□□□□ -2.29
Pcdha3Q91Y16 Gm28435-201ENSMUST00000185496 108 ntBASIC0.76□□□□□ -2.29
Pcdha3Q91Y16 Gm24637-201ENSMUST00000158674 85 ntBASIC0.75□□□□□ -2.29
Pcdha3Q91Y16 Gm22565-201ENSMUST00000175540 69 ntBASIC0.75□□□□□ -2.29
Pcdha3Q91Y16 Gm24202-201ENSMUST00000082948 103 ntBASIC0.75□□□□□ -2.29
Pcdha3Q91Y16 Gm23708-201ENSMUST00000104367 123 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm23528-201ENSMUST00000104571 132 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm22605-201ENSMUST00000158289 108 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm25366-201ENSMUST00000158845 124 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Snord50a-201ENSMUST00000178154 72 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm24463-201ENSMUST00000178417 72 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm23410-201ENSMUST00000179967 107 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm26441-201ENSMUST00000082590 104 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm22505-201ENSMUST00000082956 108 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm22363-201ENSMUST00000083100 108 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm23814-201ENSMUST00000083230 102 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Snord33-201ENSMUST00000083694 84 ntBASIC0.74□□□□□ -2.29
Pcdha3Q91Y16 Gm22205-201ENSMUST00000122655 71 ntBASIC0.73□□□□□ -2.29
Pcdha3Q91Y16 Gm22732-201ENSMUST00000158093 121 ntBASIC0.73□□□□□ -2.29
Pcdha3Q91Y16 Gm24183-201ENSMUST00000122572 93 ntBASIC0.72□□□□□ -2.29
Pcdha3Q91Y16 Snord2-201ENSMUST00000157899 69 ntBASIC0.72□□□□□ -2.29
Pcdha3Q91Y16 Gm25633-201ENSMUST00000178565 107 ntBASIC0.72□□□□□ -2.29
Pcdha3Q91Y16 Gm22805-201ENSMUST00000082739 107 ntBASIC0.72□□□□□ -2.29
Pcdha3Q91Y16 Gm24920-201ENSMUST00000083018 85 ntBASIC0.72□□□□□ -2.29
Pcdha3Q91Y16 Gm25894-201ENSMUST00000083458 75 ntBASIC0.72□□□□□ -2.29
Pcdha3Q91Y16 Mir448-201ENSMUST00000083516 112 ntBASIC0.72□□□□□ -2.29
Pcdha3Q91Y16 Gm25378-201ENSMUST00000104333 129 ntBASIC0.71□□□□□ -2.3
Pcdha3Q91Y16 Mir5117-201ENSMUST00000083226 84 ntBASIC0.71□□□□□ -2.3
Pcdha3Q91Y16 Gm22100-201ENSMUST00000157926 63 ntBASIC0.7□□□□□ -2.3
Pcdha3Q91Y16 Gm24321-201ENSMUST00000175348 80 ntBASIC0.7□□□□□ -2.3
Pcdha3Q91Y16 Mir8116-201ENSMUST00000184134 97 ntBASIC0.7□□□□□ -2.3
Pcdha3Q91Y16 Mir6394-201ENSMUST00000184738 99 ntBASIC0.7□□□□□ -2.3
Pcdha3Q91Y16 Gm43206-201ENSMUST00000197990 114 ntBASIC0.7□□□□□ -2.3
Pcdha3Q91Y16 Gm24983-201ENSMUST00000104457 69 ntBASIC0.69□□□□□ -2.3
Pcdha3Q91Y16 Gm42506-201ENSMUST00000202009 150 ntBASIC0.69□□□□□ -2.3
Pcdha3Q91Y16 Gm3702-201ENSMUST00000211754 346 ntBASIC0.69□□□□□ -2.3
Pcdha3Q91Y16 Mir216a-201ENSMUST00000083605 72 ntBASIC0.69□□□□□ -2.3
Pcdha3Q91Y16 Gm25112-201ENSMUST00000122680 104 ntBASIC0.68□□□□□ -2.3
Pcdha3Q91Y16 Gm24323-201ENSMUST00000175342 77 ntBASIC0.68□□□□□ -2.3
Pcdha3Q91Y16 Gm27289-201ENSMUST00000183341 82 ntBASIC0.68□□□□□ -2.3
Pcdha3Q91Y16 Gm27975-201ENSMUST00000184400 101 ntBASIC0.68□□□□□ -2.3
Pcdha3Q91Y16 Gm27943-201ENSMUST00000184844 116 ntBASIC0.68□□□□□ -2.3
Pcdha3Q91Y16 Gm29047-201ENSMUST00000189816 108 ntBASIC0.68□□□□□ -2.3
Pcdha3Q91Y16 Gm25696-201ENSMUST00000082900 105 ntBASIC0.68□□□□□ -2.3
Pcdha3Q91Y16 Mir200a-201ENSMUST00000083466 90 ntBASIC0.68□□□□□ -2.3
Pcdha3Q91Y16 Gm23817-201ENSMUST00000158449 104 ntBASIC0.67□□□□□ -2.3
Pcdha3Q91Y16 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.67□□□□□ -2.3
Pcdha3Q91Y16 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.67□□□□□ -2.3
Pcdha3Q91Y16 Mir10b-201ENSMUST00000083566 68 ntBASIC0.67□□□□□ -2.3
Pcdha3Q91Y16 Gm23012-201ENSMUST00000104149 83 ntBASIC0.66□□□□□ -2.3
Pcdha3Q91Y16 Gm22149-201ENSMUST00000104442 136 ntBASIC0.66□□□□□ -2.3
Pcdha3Q91Y16 Gm23468-201ENSMUST00000157125 108 ntBASIC0.66□□□□□ -2.3
Pcdha3Q91Y16 Gm44455-201ENSMUST00000200061 82 ntBASIC0.66□□□□□ -2.3
Pcdha3Q91Y16 AC154506.4-201ENSMUST00000224898 3416 ntBASIC0.66□□□□□ -2.3
Pcdha3Q91Y16 Gm26051-201ENSMUST00000104642 93 ntBASIC0.65□□□□□ -2.31
Pcdha3Q91Y16 Gm25622-201ENSMUST00000157217 104 ntBASIC0.65□□□□□ -2.31
Pcdha3Q91Y16 Gm22203-201ENSMUST00000158605 58 ntBASIC0.65□□□□□ -2.31
Pcdha3Q91Y16 Gm22406-201ENSMUST00000174923 93 ntBASIC0.65□□□□□ -2.31
Pcdha3Q91Y16 Gm44458-201ENSMUST00000196594 143 ntBASIC0.65□□□□□ -2.31
Pcdha3Q91Y16 Gm22827-201ENSMUST00000083766 107 ntBASIC0.65□□□□□ -2.31
Pcdha3Q91Y16 Gm25681-201ENSMUST00000083938 106 ntBASIC0.65□□□□□ -2.31
Pcdha3Q91Y16 Gm22469-201ENSMUST00000104118 133 ntBASIC0.64□□□□□ -2.31
Pcdha3Q91Y16 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.64□□□□□ -2.31
Pcdha3Q91Y16 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Pcdha3Q91Y16 Gm25160-201ENSMUST00000158914 102 ntBASIC0.63□□□□□ -2.31
Pcdha3Q91Y16 Mir6985-201ENSMUST00000184641 61 ntBASIC0.63□□□□□ -2.31
Pcdha3Q91Y16 Gm43038-201ENSMUST00000202359 88 ntBASIC0.63□□□□□ -2.31
Pcdha3Q91Y16 Gm22522-201ENSMUST00000158271 151 ntBASIC0.62□□□□□ -2.31
Pcdha3Q91Y16 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.62□□□□□ -2.31
Pcdha3Q91Y16 Mir7229-201ENSMUST00000197062 53 ntBASIC0.61□□□□□ -2.31
Pcdha3Q91Y16 Gm25322-201ENSMUST00000122556 104 ntBASIC0.6□□□□□ -2.31
Pcdha3Q91Y16 Mir6389-201ENSMUST00000183661 102 ntBASIC0.6□□□□□ -2.31
Pcdha3Q91Y16 Snord95-201ENSMUST00000082846 68 ntBASIC0.6□□□□□ -2.31
Pcdha3Q91Y16 Gm24162-201ENSMUST00000093665 102 ntBASIC0.6□□□□□ -2.31
Pcdha3Q91Y16 Gm24278-201ENSMUST00000104239 127 ntBASIC0.59□□□□□ -2.31
Pcdha3Q91Y16 Gm23500-201ENSMUST00000157735 98 ntBASIC0.59□□□□□ -2.31
Pcdha3Q91Y16 Gm23008-201ENSMUST00000158946 80 ntBASIC0.59□□□□□ -2.31
Pcdha3Q91Y16 Gm25870-201ENSMUST00000179845 79 ntBASIC0.59□□□□□ -2.31
Pcdha3Q91Y16 Gm22303-201ENSMUST00000082686 122 ntBASIC0.59□□□□□ -2.31
Pcdha3Q91Y16 Gm26207-201ENSMUST00000082909 104 ntBASIC0.59□□□□□ -2.31
Pcdha3Q91Y16 Mir344-201ENSMUST00000083634 95 ntBASIC0.59□□□□□ -2.31
Pcdha3Q91Y16 Gm24342-201ENSMUST00000103907 104 ntBASIC0.58□□□□□ -2.32
Pcdha3Q91Y16 Gm22679-201ENSMUST00000116975 100 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 260.6 ms