Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Gm42677-201ENSMUST00000196363 127 ntBASIC1.77□□□□□ -2.13
Usp3Q91W36 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.77□□□□□ -2.13
Usp3Q91W36 Gm24927-201ENSMUST00000083397 107 ntBASIC1.77□□□□□ -2.13
Usp3Q91W36 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Usp3Q91W36 Gm23670-201ENSMUST00000157469 119 ntBASIC1.76□□□□□ -2.13
Usp3Q91W36 Gm25183-201ENSMUST00000157752 106 ntBASIC1.76□□□□□ -2.13
Usp3Q91W36 Mir3108-201ENSMUST00000175500 79 ntBASIC1.76□□□□□ -2.13
Usp3Q91W36 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.76□□□□□ -2.13
Usp3Q91W36 Gm22761-201ENSMUST00000102278 96 ntBASIC1.75□□□□□ -2.13
Usp3Q91W36 Gm27977-201ENSMUST00000185159 111 ntBASIC1.75□□□□□ -2.13
Usp3Q91W36 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.74□□□□□ -2.13
Usp3Q91W36 Gm23012-201ENSMUST00000104149 83 ntBASIC1.74□□□□□ -2.13
Usp3Q91W36 Gm24226-201ENSMUST00000158826 97 ntBASIC1.74□□□□□ -2.13
Usp3Q91W36 Gm25936-201ENSMUST00000179952 114 ntBASIC1.74□□□□□ -2.13
Usp3Q91W36 Gm27265-201ENSMUST00000183559 77 ntBASIC1.74□□□□□ -2.13
Usp3Q91W36 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.74□□□□□ -2.13
Usp3Q91W36 Gm24233-201ENSMUST00000104317 122 ntBASIC1.73□□□□□ -2.13
Usp3Q91W36 Gm27450-201ENSMUST00000104632 90 ntBASIC1.73□□□□□ -2.13
Usp3Q91W36 Mir669h-201ENSMUST00000116944 125 ntBASIC1.73□□□□□ -2.13
Usp3Q91W36 Gm23989-201ENSMUST00000117030 66 ntBASIC1.73□□□□□ -2.13
Usp3Q91W36 Gm23853-201ENSMUST00000158375 104 ntBASIC1.73□□□□□ -2.13
Usp3Q91W36 Gm27937-201ENSMUST00000183605 88 ntBASIC1.73□□□□□ -2.13
Usp3Q91W36 Mir3569-201ENSMUST00000185080 58 ntBASIC1.73□□□□□ -2.13
Usp3Q91W36 Gm26181-201ENSMUST00000157687 106 ntBASIC1.72□□□□□ -2.13
Usp3Q91W36 Snord95-201ENSMUST00000082846 68 ntBASIC1.72□□□□□ -2.13
Usp3Q91W36 Gm25128-201ENSMUST00000083339 76 ntBASIC1.72□□□□□ -2.13
Usp3Q91W36 Mir148b-201ENSMUST00000083626 97 ntBASIC1.72□□□□□ -2.13
Usp3Q91W36 Gm22078-201ENSMUST00000157593 103 ntBASIC1.71□□□□□ -2.14
Usp3Q91W36 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.71□□□□□ -2.14
Usp3Q91W36 Gm16399-201ENSMUST00000181423 219 ntBASIC1.71□□□□□ -2.14
Usp3Q91W36 Gm28383-201ENSMUST00000187563 139 ntBASIC1.71□□□□□ -2.14
Usp3Q91W36 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.7□□□□□ -2.14
Usp3Q91W36 Gm25656-201ENSMUST00000158466 66 ntBASIC1.7□□□□□ -2.14
Usp3Q91W36 Gm24174-201ENSMUST00000158933 111 ntBASIC1.7□□□□□ -2.14
Usp3Q91W36 Mir3079-201ENSMUST00000175428 90 ntBASIC1.7□□□□□ -2.14
Usp3Q91W36 Traj60-201ENSMUST00000167781 54 ntBASIC1.69□□□□□ -2.14
Usp3Q91W36 Gm24165-201ENSMUST00000082718 128 ntBASIC1.69□□□□□ -2.14
Usp3Q91W36 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.69□□□□□ -2.14
Usp3Q91W36 Gm25648-201ENSMUST00000177844 79 ntBASIC1.68□□□□□ -2.14
Usp3Q91W36 Gm42533-201ENSMUST00000196247 157 ntBASIC1.67□□□□□ -2.14
Usp3Q91W36 Gm26379-202ENSMUST00000200225 132 ntBASIC1.67□□□□□ -2.14
Usp3Q91W36 Gm45754-201ENSMUST00000212380 279 ntBASIC1.67□□□□□ -2.14
Usp3Q91W36 Gm25186-201ENSMUST00000083909 108 ntBASIC1.67□□□□□ -2.14
Usp3Q91W36 Mir873a-201ENSMUST00000104863 77 ntBASIC1.66□□□□□ -2.14
Usp3Q91W36 Gm22039-201ENSMUST00000157278 132 ntBASIC1.66□□□□□ -2.14
Usp3Q91W36 Gm26139-201ENSMUST00000180098 107 ntBASIC1.66□□□□□ -2.14
Usp3Q91W36 Gm27248-201ENSMUST00000184004 166 ntBASIC1.66□□□□□ -2.14
Usp3Q91W36 Mir3098-201ENSMUST00000175416 87 ntBASIC1.65□□□□□ -2.15
Usp3Q91W36 Gm24638-201ENSMUST00000179807 132 ntBASIC1.65□□□□□ -2.15
Usp3Q91W36 Mir7010-201ENSMUST00000183464 63 ntBASIC1.65□□□□□ -2.15
Usp3Q91W36 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Usp3Q91W36 Gm22233-201ENSMUST00000157464 114 ntBASIC1.64□□□□□ -2.15
Usp3Q91W36 Gm25868-201ENSMUST00000158253 114 ntBASIC1.64□□□□□ -2.15
Usp3Q91W36 Gm25166-201ENSMUST00000158909 111 ntBASIC1.64□□□□□ -2.15
Usp3Q91W36 Mir6351-201ENSMUST00000183826 99 ntBASIC1.64□□□□□ -2.15
Usp3Q91W36 Gm26438-201ENSMUST00000082593 107 ntBASIC1.64□□□□□ -2.15
Usp3Q91W36 Mir320-201ENSMUST00000083594 82 ntBASIC1.64□□□□□ -2.15
Usp3Q91W36 Gm22386-201ENSMUST00000158192 129 ntBASIC1.63□□□□□ -2.15
Usp3Q91W36 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.63□□□□□ -2.15
Usp3Q91W36 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Usp3Q91W36 Mir301b-201ENSMUST00000102333 97 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm14533-201ENSMUST00000117088 93 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm15115-201ENSMUST00000121145 264 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm23672-201ENSMUST00000157471 107 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm25465-201ENSMUST00000157716 105 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm22556-201ENSMUST00000157803 100 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm23072-201ENSMUST00000158243 123 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm22520-201ENSMUST00000158269 129 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm24222-201ENSMUST00000158834 93 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 AC238676.2-201ENSMUST00000220910 94 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm22459-201ENSMUST00000082577 108 ntBASIC1.62□□□□□ -2.15
Usp3Q91W36 Gm24076-201ENSMUST00000158179 94 ntBASIC1.61□□□□□ -2.15
Usp3Q91W36 Gm22087-201ENSMUST00000158339 88 ntBASIC1.61□□□□□ -2.15
Usp3Q91W36 Mir7009-201ENSMUST00000184519 64 ntBASIC1.61□□□□□ -2.15
Usp3Q91W36 Gm28794-201ENSMUST00000185276 136 ntBASIC1.61□□□□□ -2.15
Usp3Q91W36 Gm44408-201ENSMUST00000200205 66 ntBASIC1.61□□□□□ -2.15
Usp3Q91W36 Gm24201-201ENSMUST00000082946 125 ntBASIC1.61□□□□□ -2.15
Usp3Q91W36 Gm25832-201ENSMUST00000104140 130 ntBASIC1.6□□□□□ -2.15
Usp3Q91W36 Gm23289-201ENSMUST00000175615 108 ntBASIC1.6□□□□□ -2.15
Usp3Q91W36 Mir101a-201ENSMUST00000083517 83 ntBASIC1.6□□□□□ -2.15
Usp3Q91W36 Gm22603-201ENSMUST00000157603 96 ntBASIC1.59□□□□□ -2.15
Usp3Q91W36 Gm24942-201ENSMUST00000158328 114 ntBASIC1.59□□□□□ -2.15
Usp3Q91W36 Gm24500-201ENSMUST00000158447 124 ntBASIC1.59□□□□□ -2.15
Usp3Q91W36 Gm23416-201ENSMUST00000175520 95 ntBASIC1.59□□□□□ -2.15
Usp3Q91W36 Mir7673-201ENSMUST00000184567 64 ntBASIC1.59□□□□□ -2.15
Usp3Q91W36 Gm24701-201ENSMUST00000101946 105 ntBASIC1.58□□□□□ -2.16
Usp3Q91W36 Gm25440-201ENSMUST00000158279 154 ntBASIC1.58□□□□□ -2.16
Usp3Q91W36 Gm27898-201ENSMUST00000183987 80 ntBASIC1.58□□□□□ -2.16
Usp3Q91W36 Gm27980-201ENSMUST00000184094 169 ntBASIC1.58□□□□□ -2.16
Usp3Q91W36 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Usp3Q91W36 Gm22717-201ENSMUST00000122703 171 ntBASIC1.57□□□□□ -2.16
Usp3Q91W36 Gm23590-201ENSMUST00000157661 104 ntBASIC1.57□□□□□ -2.16
Usp3Q91W36 CT030170.1-201ENSMUST00000222183 148 ntBASIC1.57□□□□□ -2.16
Usp3Q91W36 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.56□□□□□ -2.16
Usp3Q91W36 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.56□□□□□ -2.16
Usp3Q91W36 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.56□□□□□ -2.16
Usp3Q91W36 Gm44211-201ENSMUST00000204867 145 ntBASIC1.56□□□□□ -2.16
Usp3Q91W36 Gm25524-201ENSMUST00000101821 107 ntBASIC1.55□□□□□ -2.16
Usp3Q91W36 Gm24070-201ENSMUST00000104519 130 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 291.7 ms