Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
Mmp28Q8CGV8 Gm24963-201ENSMUST00000157916 144 ntBASIC0.42□□□□□ -2.34
Mmp28Q8CGV8 AC160962.3-201ENSMUST00000225914 112 ntBASIC0.42□□□□□ -2.34
Mmp28Q8CGV8 Gm24278-201ENSMUST00000104239 127 ntBASIC0.41□□□□□ -2.34
Mmp28Q8CGV8 Snord2-201ENSMUST00000157899 69 ntBASIC0.41□□□□□ -2.34
Mmp28Q8CGV8 Gm22522-201ENSMUST00000158271 151 ntBASIC0.41□□□□□ -2.34
Mmp28Q8CGV8 Mir6985-201ENSMUST00000184641 61 ntBASIC0.41□□□□□ -2.34
Mmp28Q8CGV8 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.41□□□□□ -2.34
Mmp28Q8CGV8 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.41□□□□□ -2.34
Mmp28Q8CGV8 Mir344-201ENSMUST00000083634 95 ntBASIC0.41□□□□□ -2.34
Mmp28Q8CGV8 Snora2b-201ENSMUST00000084005 137 ntBASIC0.41□□□□□ -2.34
Mmp28Q8CGV8 Gm22770-201ENSMUST00000158368 67 ntBASIC0.4□□□□□ -2.35
Mmp28Q8CGV8 Gm24697-201ENSMUST00000083881 107 ntBASIC0.4□□□□□ -2.35
Mmp28Q8CGV8 Mir670-201ENSMUST00000102380 100 ntBASIC0.39□□□□□ -2.35
Mmp28Q8CGV8 Gm26253-201ENSMUST00000122493 103 ntBASIC0.39□□□□□ -2.35
Mmp28Q8CGV8 Mir3105-201ENSMUST00000175480 85 ntBASIC0.39□□□□□ -2.35
Mmp28Q8CGV8 Gm44457-201ENSMUST00000198109 76 ntBASIC0.39□□□□□ -2.35
Mmp28Q8CGV8 Gm45541-201ENSMUST00000210443 54 ntBASIC0.39□□□□□ -2.35
Mmp28Q8CGV8 Gm22303-201ENSMUST00000082686 122 ntBASIC0.39□□□□□ -2.35
Mmp28Q8CGV8 Gm23244-201ENSMUST00000083375 92 ntBASIC0.39□□□□□ -2.35
Mmp28Q8CGV8 Gm26478-201ENSMUST00000122611 133 ntBASIC0.38□□□□□ -2.35
Mmp28Q8CGV8 Gm23605-201ENSMUST00000157255 127 ntBASIC0.38□□□□□ -2.35
Mmp28Q8CGV8 Gm23261-201ENSMUST00000158316 136 ntBASIC0.38□□□□□ -2.35
Mmp28Q8CGV8 Gm25366-201ENSMUST00000158845 124 ntBASIC0.38□□□□□ -2.35
Mmp28Q8CGV8 Gm22239-201ENSMUST00000175220 103 ntBASIC0.38□□□□□ -2.35
Mmp28Q8CGV8 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.38□□□□□ -2.35
Mmp28Q8CGV8 Mir5619-201ENSMUST00000176065 61 ntBASIC0.38□□□□□ -2.35
Mmp28Q8CGV8 Gm24202-201ENSMUST00000082948 103 ntBASIC0.38□□□□□ -2.35
Mmp28Q8CGV8 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.38□□□□□ -2.35
Mmp28Q8CGV8 Gm23012-201ENSMUST00000104149 83 ntBASIC0.37□□□□□ -2.35
Mmp28Q8CGV8 Gm26303-201ENSMUST00000116845 119 ntBASIC0.37□□□□□ -2.35
Mmp28Q8CGV8 Gm23197-201ENSMUST00000158809 112 ntBASIC0.37□□□□□ -2.35
Mmp28Q8CGV8 Gm44458-201ENSMUST00000196594 143 ntBASIC0.37□□□□□ -2.35
Mmp28Q8CGV8 Gm44327-201ENSMUST00000200068 117 ntBASIC0.37□□□□□ -2.35
Mmp28Q8CGV8 Mir10b-201ENSMUST00000083566 68 ntBASIC0.37□□□□□ -2.35
Mmp28Q8CGV8 Gm25408-201ENSMUST00000104104 133 ntBASIC0.36□□□□□ -2.35
Mmp28Q8CGV8 Gm24983-201ENSMUST00000104457 69 ntBASIC0.36□□□□□ -2.35
Mmp28Q8CGV8 Gm13577-201ENSMUST00000121365 205 ntBASIC0.36□□□□□ -2.35
Mmp28Q8CGV8 Mir200b-201ENSMUST00000083615 70 ntBASIC0.36□□□□□ -2.35
Mmp28Q8CGV8 Gm22140-201ENSMUST00000158745 120 ntBASIC0.35□□□□□ -2.35
Mmp28Q8CGV8 Gm23790-201ENSMUST00000083013 107 ntBASIC0.35□□□□□ -2.35
Mmp28Q8CGV8 Gm24258-201ENSMUST00000083739 133 ntBASIC0.35□□□□□ -2.35
Mmp28Q8CGV8 Gm24342-201ENSMUST00000103907 104 ntBASIC0.34□□□□□ -2.36
Mmp28Q8CGV8 Gm22203-201ENSMUST00000158605 58 ntBASIC0.34□□□□□ -2.36
Mmp28Q8CGV8 Mir450b-201ENSMUST00000102095 82 ntBASIC0.33□□□□□ -2.36
Mmp28Q8CGV8 Gm22100-201ENSMUST00000157926 63 ntBASIC0.33□□□□□ -2.36
Mmp28Q8CGV8 Gm22983-201ENSMUST00000158308 104 ntBASIC0.32□□□□□ -2.36
Mmp28Q8CGV8 Mir3083-201ENSMUST00000175377 64 ntBASIC0.32□□□□□ -2.36
Mmp28Q8CGV8 Gm25449-201ENSMUST00000179389 79 ntBASIC0.32□□□□□ -2.36
Mmp28Q8CGV8 Gm26466-201ENSMUST00000179615 79 ntBASIC0.32□□□□□ -2.36
Mmp28Q8CGV8 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.32□□□□□ -2.36
Mmp28Q8CGV8 Gm22759-201ENSMUST00000102276 96 ntBASIC0.31□□□□□ -2.36
Mmp28Q8CGV8 Gm26425-201ENSMUST00000122529 82 ntBASIC0.31□□□□□ -2.36
Mmp28Q8CGV8 Gm25160-201ENSMUST00000158914 102 ntBASIC0.31□□□□□ -2.36
Mmp28Q8CGV8 Gm23008-201ENSMUST00000158946 80 ntBASIC0.31□□□□□ -2.36
Mmp28Q8CGV8 Gm44345-201ENSMUST00000199560 135 ntBASIC0.31□□□□□ -2.36
Mmp28Q8CGV8 Gm23321-201ENSMUST00000104465 126 ntBASIC0.3□□□□□ -2.36
Mmp28Q8CGV8 Gm24183-201ENSMUST00000122572 93 ntBASIC0.3□□□□□ -2.36
Mmp28Q8CGV8 Gm23672-201ENSMUST00000157471 107 ntBASIC0.3□□□□□ -2.36
Mmp28Q8CGV8 Gm22845-201ENSMUST00000157712 104 ntBASIC0.3□□□□□ -2.36
Mmp28Q8CGV8 Gm26285-201ENSMUST00000177923 107 ntBASIC0.3□□□□□ -2.36
Mmp28Q8CGV8 Gm20108-201ENSMUST00000219977 153 ntBASIC0.3□□□□□ -2.36
Mmp28Q8CGV8 Gm23622-201ENSMUST00000082460 107 ntBASIC0.3□□□□□ -2.36
Mmp28Q8CGV8 Gm25496-201ENSMUST00000104430 120 ntBASIC0.29□□□□□ -2.36
Mmp28Q8CGV8 Gm23528-201ENSMUST00000104571 132 ntBASIC0.29□□□□□ -2.36
Mmp28Q8CGV8 Gm24384-201ENSMUST00000122693 75 ntBASIC0.29□□□□□ -2.36
Mmp28Q8CGV8 Gm22406-201ENSMUST00000174923 93 ntBASIC0.29□□□□□ -2.36
Mmp28Q8CGV8 Gm27475-201ENSMUST00000183420 61 ntBASIC0.29□□□□□ -2.36
Mmp28Q8CGV8 Mir7065-201ENSMUST00000185110 61 ntBASIC0.29□□□□□ -2.36
Mmp28Q8CGV8 Gm42845-201ENSMUST00000197766 105 ntBASIC0.29□□□□□ -2.36
Mmp28Q8CGV8 Snord95-201ENSMUST00000082846 68 ntBASIC0.29□□□□□ -2.36
Mmp28Q8CGV8 Gm27980-201ENSMUST00000184094 169 ntBASIC0.28□□□□□ -2.36
Mmp28Q8CGV8 Gm29047-201ENSMUST00000189816 108 ntBASIC0.28□□□□□ -2.36
Mmp28Q8CGV8 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.28□□□□□ -2.36
Mmp28Q8CGV8 AC122327.1-201ENSMUST00000220778 108 ntBASIC0.28□□□□□ -2.36
Mmp28Q8CGV8 Gm25289-201ENSMUST00000122799 119 ntBASIC0.27□□□□□ -2.37
Mmp28Q8CGV8 Gm25055-201ENSMUST00000157369 76 ntBASIC0.27□□□□□ -2.37
Mmp28Q8CGV8 Gm26152-201ENSMUST00000157427 101 ntBASIC0.27□□□□□ -2.37
Mmp28Q8CGV8 Gm26007-201ENSMUST00000158798 120 ntBASIC0.27□□□□□ -2.37
Mmp28Q8CGV8 Gm27686-201ENSMUST00000185123 91 ntBASIC0.27□□□□□ -2.37
Mmp28Q8CGV8 Gm44803-201ENSMUST00000204384 156 ntBASIC0.27□□□□□ -2.37
Mmp28Q8CGV8 Gm26438-201ENSMUST00000082593 107 ntBASIC0.27□□□□□ -2.37
Mmp28Q8CGV8 Gm22981-201ENSMUST00000082611 75 ntBASIC0.27□□□□□ -2.37
Mmp28Q8CGV8 Gm23060-201ENSMUST00000102345 109 ntBASIC0.26□□□□□ -2.37
Mmp28Q8CGV8 Gm22732-201ENSMUST00000158093 121 ntBASIC0.26□□□□□ -2.37
Mmp28Q8CGV8 Gm23349-201ENSMUST00000158432 98 ntBASIC0.26□□□□□ -2.37
Mmp28Q8CGV8 Gm44828-201ENSMUST00000203745 106 ntBASIC0.26□□□□□ -2.37
Mmp28Q8CGV8 Gm23969-201ENSMUST00000083324 74 ntBASIC0.26□□□□□ -2.37
Mmp28Q8CGV8 Gm25756-201ENSMUST00000103990 136 ntBASIC0.25□□□□□ -2.37
Mmp28Q8CGV8 Gm23126-201ENSMUST00000104260 134 ntBASIC0.25□□□□□ -2.37
Mmp28Q8CGV8 Scarna8-201ENSMUST00000158333 131 ntBASIC0.25□□□□□ -2.37
Mmp28Q8CGV8 Gm25656-201ENSMUST00000158466 66 ntBASIC0.25□□□□□ -2.37
Mmp28Q8CGV8 Gm24884-201ENSMUST00000158784 119 ntBASIC0.25□□□□□ -2.37
Mmp28Q8CGV8 Gm26116-201ENSMUST00000175600 77 ntBASIC0.25□□□□□ -2.37
Mmp28Q8CGV8 Gm23369-201ENSMUST00000175406 105 ntBASIC0.24□□□□□ -2.37
Mmp28Q8CGV8 Gm25229-201ENSMUST00000178587 79 ntBASIC0.24□□□□□ -2.37
Mmp28Q8CGV8 Gm22677-201ENSMUST00000116977 108 ntBASIC0.23□□□□□ -2.37
Mmp28Q8CGV8 Gm22205-201ENSMUST00000122655 71 ntBASIC0.23□□□□□ -2.37
Mmp28Q8CGV8 Gm25622-201ENSMUST00000157217 104 ntBASIC0.23□□□□□ -2.37
Mmp28Q8CGV8 Gm27639-201ENSMUST00000184937 85 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 146.6 ms