Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir3096-201ENSMUST00000116685 71 ntBASIC1.93□□□□□ -2.1
Trim47Q8C0E3 Gm26038-201ENSMUST00000158151 106 ntBASIC1.93□□□□□ -2.1
Trim47Q8C0E3 Gm22761-201ENSMUST00000102278 96 ntBASIC1.92□□□□□ -2.1
Trim47Q8C0E3 Gm27937-201ENSMUST00000183605 88 ntBASIC1.92□□□□□ -2.1
Trim47Q8C0E3 Mir6995-201ENSMUST00000183658 71 ntBASIC1.92□□□□□ -2.1
Trim47Q8C0E3 Mir324-201ENSMUST00000083600 89 ntBASIC1.92□□□□□ -2.1
Trim47Q8C0E3 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
Trim47Q8C0E3 Mir873a-201ENSMUST00000104863 77 ntBASIC1.91□□□□□ -2.1
Trim47Q8C0E3 Gm23967-201ENSMUST00000175062 78 ntBASIC1.91□□□□□ -2.1
Trim47Q8C0E3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.91□□□□□ -2.1
Trim47Q8C0E3 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.91□□□□□ -2.1
Trim47Q8C0E3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
Trim47Q8C0E3 Mir1933-201ENSMUST00000158930 88 ntBASIC1.89□□□□□ -2.11
Trim47Q8C0E3 Mir3098-201ENSMUST00000175416 87 ntBASIC1.89□□□□□ -2.11
Trim47Q8C0E3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trim47Q8C0E3 Gm22474-201ENSMUST00000179407 107 ntBASIC1.89□□□□□ -2.11
Trim47Q8C0E3 Mir7675-201ENSMUST00000184262 58 ntBASIC1.89□□□□□ -2.11
Trim47Q8C0E3 Mir7673-201ENSMUST00000184567 64 ntBASIC1.89□□□□□ -2.11
Trim47Q8C0E3 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.89□□□□□ -2.11
Trim47Q8C0E3 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trim47Q8C0E3 Gm22149-201ENSMUST00000104442 136 ntBASIC1.88□□□□□ -2.11
Trim47Q8C0E3 Gm22663-201ENSMUST00000158721 102 ntBASIC1.88□□□□□ -2.11
Trim47Q8C0E3 Mir376b-201ENSMUST00000195930 82 ntBASIC1.88□□□□□ -2.11
Trim47Q8C0E3 Gm45754-201ENSMUST00000212380 279 ntBASIC1.88□□□□□ -2.11
Trim47Q8C0E3 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.88□□□□□ -2.11
Trim47Q8C0E3 Gm22466-201ENSMUST00000175278 69 ntBASIC1.87□□□□□ -2.11
Trim47Q8C0E3 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trim47Q8C0E3 Gm26375-201ENSMUST00000101829 106 ntBASIC1.86□□□□□ -2.11
Trim47Q8C0E3 Mir669h-201ENSMUST00000116944 125 ntBASIC1.86□□□□□ -2.11
Trim47Q8C0E3 Gm26181-201ENSMUST00000157687 106 ntBASIC1.85□□□□□ -2.11
Trim47Q8C0E3 Gm22459-201ENSMUST00000082577 108 ntBASIC1.85□□□□□ -2.11
Trim47Q8C0E3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.85□□□□□ -2.11
Trim47Q8C0E3 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trim47Q8C0E3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Trim47Q8C0E3 Gm25040-201ENSMUST00000103877 66 ntBASIC1.84□□□□□ -2.11
Trim47Q8C0E3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.84□□□□□ -2.11
Trim47Q8C0E3 Gm24996-201ENSMUST00000158390 99 ntBASIC1.84□□□□□ -2.11
Trim47Q8C0E3 Gm24222-201ENSMUST00000158834 93 ntBASIC1.84□□□□□ -2.11
Trim47Q8C0E3 Gm44396-201ENSMUST00000199843 114 ntBASIC1.84□□□□□ -2.11
Trim47Q8C0E3 Mir148b-201ENSMUST00000083626 97 ntBASIC1.84□□□□□ -2.11
Trim47Q8C0E3 Gm24494-201ENSMUST00000083804 81 ntBASIC1.84□□□□□ -2.11
Trim47Q8C0E3 Gm25440-201ENSMUST00000158279 154 ntBASIC1.83□□□□□ -2.12
Trim47Q8C0E3 Gm24549-201ENSMUST00000158647 139 ntBASIC1.83□□□□□ -2.12
Trim47Q8C0E3 Gm28794-201ENSMUST00000185276 136 ntBASIC1.83□□□□□ -2.12
Trim47Q8C0E3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.83□□□□□ -2.12
Trim47Q8C0E3 Gm23012-201ENSMUST00000104149 83 ntBASIC1.82□□□□□ -2.12
Trim47Q8C0E3 Gm25010-201ENSMUST00000158403 65 ntBASIC1.82□□□□□ -2.12
Trim47Q8C0E3 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.82□□□□□ -2.12
Trim47Q8C0E3 Mir6342-201ENSMUST00000183870 125 ntBASIC1.82□□□□□ -2.12
Trim47Q8C0E3 Snord95-201ENSMUST00000082846 68 ntBASIC1.82□□□□□ -2.12
Trim47Q8C0E3 Mir30a-201ENSMUST00000083471 71 ntBASIC1.82□□□□□ -2.12
Trim47Q8C0E3 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.82□□□□□ -2.12
Trim47Q8C0E3 Mir669a-3-201ENSMUST00000102074 109 ntBASIC1.81□□□□□ -2.12
Trim47Q8C0E3 Mir100-201ENSMUST00000175270 80 ntBASIC1.81□□□□□ -2.12
Trim47Q8C0E3 Gm27326-201ENSMUST00000183504 95 ntBASIC1.81□□□□□ -2.12
Trim47Q8C0E3 Mir377-201ENSMUST00000083504 68 ntBASIC1.81□□□□□ -2.12
Trim47Q8C0E3 Gm22785-201ENSMUST00000104087 132 ntBASIC1.8□□□□□ -2.12
Trim47Q8C0E3 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Trim47Q8C0E3 Gm26274-201ENSMUST00000157103 321 ntBASIC1.8□□□□□ -2.12
Trim47Q8C0E3 Gm25886-201ENSMUST00000157780 114 ntBASIC1.8□□□□□ -2.12
Trim47Q8C0E3 Gm23339-201ENSMUST00000158962 139 ntBASIC1.8□□□□□ -2.12
Trim47Q8C0E3 Gm27265-201ENSMUST00000183559 77 ntBASIC1.8□□□□□ -2.12
Trim47Q8C0E3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.79□□□□□ -2.12
Trim47Q8C0E3 Gm42677-201ENSMUST00000196363 127 ntBASIC1.79□□□□□ -2.12
Trim47Q8C0E3 Gm22652-201ENSMUST00000083207 131 ntBASIC1.79□□□□□ -2.12
Trim47Q8C0E3 Mir320-201ENSMUST00000083594 82 ntBASIC1.79□□□□□ -2.12
Trim47Q8C0E3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.78□□□□□ -2.12
Trim47Q8C0E3 Gm23130-201ENSMUST00000104252 74 ntBASIC1.78□□□□□ -2.12
Trim47Q8C0E3 Gm22965-201ENSMUST00000157958 101 ntBASIC1.78□□□□□ -2.12
Trim47Q8C0E3 Gm25831-201ENSMUST00000158924 163 ntBASIC1.78□□□□□ -2.12
Trim47Q8C0E3 Gm25936-201ENSMUST00000179952 114 ntBASIC1.78□□□□□ -2.12
Trim47Q8C0E3 Gm24259-201ENSMUST00000083740 107 ntBASIC1.78□□□□□ -2.12
Trim47Q8C0E3 Snord69-201ENSMUST00000104024 80 ntBASIC1.77□□□□□ -2.13
Trim47Q8C0E3 Gm23590-201ENSMUST00000157661 104 ntBASIC1.77□□□□□ -2.13
Trim47Q8C0E3 Gm24400-201ENSMUST00000157865 107 ntBASIC1.77□□□□□ -2.13
Trim47Q8C0E3 Gm24902-201ENSMUST00000158126 123 ntBASIC1.77□□□□□ -2.13
Trim47Q8C0E3 Gm22164-201ENSMUST00000158413 106 ntBASIC1.77□□□□□ -2.13
Trim47Q8C0E3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.77□□□□□ -2.13
Trim47Q8C0E3 Gm24797-201ENSMUST00000178103 107 ntBASIC1.77□□□□□ -2.13
Trim47Q8C0E3 Gm27717-201ENSMUST00000183933 151 ntBASIC1.77□□□□□ -2.13
Trim47Q8C0E3 Gm26438-201ENSMUST00000082593 107 ntBASIC1.77□□□□□ -2.13
Trim47Q8C0E3 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
Trim47Q8C0E3 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.76□□□□□ -2.13
Trim47Q8C0E3 Mir653-201ENSMUST00000102402 85 ntBASIC1.76□□□□□ -2.13
Trim47Q8C0E3 Gm13065-201ENSMUST00000119178 141 ntBASIC1.76□□□□□ -2.13
Trim47Q8C0E3 Gm22595-201ENSMUST00000104250 130 ntBASIC1.75□□□□□ -2.13
Trim47Q8C0E3 Mir8119-201ENSMUST00000183371 129 ntBASIC1.75□□□□□ -2.13
Trim47Q8C0E3 Mir7231-201ENSMUST00000196252 61 ntBASIC1.75□□□□□ -2.13
Trim47Q8C0E3 Mir1949-202ENSMUST00000199259 70 ntBASIC1.75□□□□□ -2.13
Trim47Q8C0E3 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Trim47Q8C0E3 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trim47Q8C0E3 Gm23708-201ENSMUST00000104367 123 ntBASIC1.74□□□□□ -2.13
Trim47Q8C0E3 Gm15115-201ENSMUST00000121145 264 ntBASIC1.74□□□□□ -2.13
Trim47Q8C0E3 Gm24174-201ENSMUST00000158933 111 ntBASIC1.74□□□□□ -2.13
Trim47Q8C0E3 Gm43911-201ENSMUST00000203097 76 ntBASIC1.74□□□□□ -2.13
Trim47Q8C0E3 Gm24070-201ENSMUST00000104519 130 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Gm14533-201ENSMUST00000117088 93 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Gm22386-201ENSMUST00000158192 129 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Gm26491-201ENSMUST00000179268 121 ntBASIC1.73□□□□□ -2.13
Trim47Q8C0E3 Gm27248-201ENSMUST00000184004 166 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 187.7 ms