Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm25832-201ENSMUST00000104140 130 ntBASIC1.33□□□□□ -2.2
Scaf4Q6PFF0 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Scaf4Q6PFF0 Snord69-201ENSMUST00000104024 80 ntBASIC1.32□□□□□ -2.2
Scaf4Q6PFF0 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.32□□□□□ -2.2
Scaf4Q6PFF0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Scaf4Q6PFF0 Gm26224-201ENSMUST00000082506 80 ntBASIC1.32□□□□□ -2.2
Scaf4Q6PFF0 Gm22663-201ENSMUST00000158721 102 ntBASIC1.31□□□□□ -2.2
Scaf4Q6PFF0 Mir100-201ENSMUST00000175270 80 ntBASIC1.31□□□□□ -2.2
Scaf4Q6PFF0 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.31□□□□□ -2.2
Scaf4Q6PFF0 Gm25705-201ENSMUST00000083119 104 ntBASIC1.31□□□□□ -2.2
Scaf4Q6PFF0 Mir377-201ENSMUST00000083504 68 ntBASIC1.31□□□□□ -2.2
Scaf4Q6PFF0 Gm23336-201ENSMUST00000117023 123 ntBASIC1.3□□□□□ -2.2
Scaf4Q6PFF0 Gm27549-201ENSMUST00000183508 62 ntBASIC1.3□□□□□ -2.2
Scaf4Q6PFF0 Mir6342-201ENSMUST00000183870 125 ntBASIC1.3□□□□□ -2.2
Scaf4Q6PFF0 Mir376b-201ENSMUST00000195930 82 ntBASIC1.3□□□□□ -2.2
Scaf4Q6PFF0 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
Scaf4Q6PFF0 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.29□□□□□ -2.2
Scaf4Q6PFF0 Gm24865-201ENSMUST00000103246 96 ntBASIC1.29□□□□□ -2.2
Scaf4Q6PFF0 Gm25040-201ENSMUST00000103877 66 ntBASIC1.29□□□□□ -2.2
Scaf4Q6PFF0 Gm25968-201ENSMUST00000157167 100 ntBASIC1.29□□□□□ -2.2
Scaf4Q6PFF0 Traj60-201ENSMUST00000167781 54 ntBASIC1.29□□□□□ -2.2
Scaf4Q6PFF0 Gm25328-201ENSMUST00000175013 107 ntBASIC1.29□□□□□ -2.2
Scaf4Q6PFF0 Mir494-201ENSMUST00000093632 85 ntBASIC1.29□□□□□ -2.2
Scaf4Q6PFF0 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
Scaf4Q6PFF0 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Scaf4Q6PFF0 Snord45b-201ENSMUST00000082797 71 ntBASIC1.28□□□□□ -2.2
Scaf4Q6PFF0 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.27□□□□□ -2.21
Scaf4Q6PFF0 Gm23245-201ENSMUST00000083370 135 ntBASIC1.27□□□□□ -2.21
Scaf4Q6PFF0 Mir500-201ENSMUST00000093600 92 ntBASIC1.27□□□□□ -2.21
Scaf4Q6PFF0 Gm23766-201ENSMUST00000103894 80 ntBASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Gm24580-201ENSMUST00000103965 131 ntBASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Gm6272-201ENSMUST00000121256 171 ntBASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Gm23267-201ENSMUST00000178490 132 ntBASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Gm23714-201ENSMUST00000179259 105 ntBASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Gm29432-201ENSMUST00000185397 139 ntBASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Gm38323-201ENSMUST00000192450 210 ntBASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Gm45655-201ENSMUST00000211625 160 ntBASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Scaf4Q6PFF0 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Gm24271-201ENSMUST00000102327 111 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Mir876-201ENSMUST00000104659 81 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Gm23122-201ENSMUST00000157645 103 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Gm24902-201ENSMUST00000158126 123 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Mir3108-201ENSMUST00000175500 79 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Gm28794-201ENSMUST00000185276 136 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Gm25820-201ENSMUST00000198589 127 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Mir211-201ENSMUST00000083651 106 ntBASIC1.25□□□□□ -2.21
Scaf4Q6PFF0 Gm25496-201ENSMUST00000104430 120 ntBASIC1.24□□□□□ -2.21
Scaf4Q6PFF0 Gm22485-201ENSMUST00000157990 109 ntBASIC1.24□□□□□ -2.21
Scaf4Q6PFF0 Gm24808-201ENSMUST00000157993 118 ntBASIC1.24□□□□□ -2.21
Scaf4Q6PFF0 Gm24226-201ENSMUST00000158826 97 ntBASIC1.24□□□□□ -2.21
Scaf4Q6PFF0 Gm25831-201ENSMUST00000158924 163 ntBASIC1.24□□□□□ -2.21
Scaf4Q6PFF0 Mir8116-201ENSMUST00000184134 97 ntBASIC1.24□□□□□ -2.21
Scaf4Q6PFF0 Mir1949-202ENSMUST00000199259 70 ntBASIC1.24□□□□□ -2.21
Scaf4Q6PFF0 Gm22652-201ENSMUST00000083207 131 ntBASIC1.24□□□□□ -2.21
Scaf4Q6PFF0 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Scaf4Q6PFF0 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Scaf4Q6PFF0 Gm13065-201ENSMUST00000119178 141 ntBASIC1.23□□□□□ -2.21
Scaf4Q6PFF0 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.23□□□□□ -2.21
Scaf4Q6PFF0 Gm16399-201ENSMUST00000181423 219 ntBASIC1.23□□□□□ -2.21
Scaf4Q6PFF0 Gm27717-201ENSMUST00000183933 151 ntBASIC1.23□□□□□ -2.21
Scaf4Q6PFF0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Scaf4Q6PFF0 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.22□□□□□ -2.21
Scaf4Q6PFF0 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.22□□□□□ -2.21
Scaf4Q6PFF0 Gm23012-201ENSMUST00000104149 83 ntBASIC1.21□□□□□ -2.22
Scaf4Q6PFF0 Gm22074-201ENSMUST00000158595 113 ntBASIC1.21□□□□□ -2.22
Scaf4Q6PFF0 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.21□□□□□ -2.22
Scaf4Q6PFF0 Gm25300-201ENSMUST00000175284 84 ntBASIC1.21□□□□□ -2.22
Scaf4Q6PFF0 Mir3079-201ENSMUST00000175428 90 ntBASIC1.21□□□□□ -2.22
Scaf4Q6PFF0 Gm27554-201ENSMUST00000185074 98 ntBASIC1.21□□□□□ -2.22
Scaf4Q6PFF0 Gm23708-201ENSMUST00000104367 123 ntBASIC1.2□□□□□ -2.22
Scaf4Q6PFF0 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
Scaf4Q6PFF0 Mir669h-201ENSMUST00000116944 125 ntBASIC1.19□□□□□ -2.22
Scaf4Q6PFF0 Gm22233-201ENSMUST00000157464 114 ntBASIC1.19□□□□□ -2.22
Scaf4Q6PFF0 Gm25868-201ENSMUST00000158253 114 ntBASIC1.19□□□□□ -2.22
Scaf4Q6PFF0 Gm24500-201ENSMUST00000158447 124 ntBASIC1.19□□□□□ -2.22
Scaf4Q6PFF0 Gm26363-201ENSMUST00000158866 83 ntBASIC1.19□□□□□ -2.22
Scaf4Q6PFF0 Gm22980-201ENSMUST00000082608 70 ntBASIC1.19□□□□□ -2.22
Scaf4Q6PFF0 Snord95-201ENSMUST00000082846 68 ntBASIC1.19□□□□□ -2.22
Scaf4Q6PFF0 Gm23989-201ENSMUST00000117030 66 ntBASIC1.18□□□□□ -2.22
Scaf4Q6PFF0 Gm23853-201ENSMUST00000158375 104 ntBASIC1.18□□□□□ -2.22
Scaf4Q6PFF0 Gm23967-201ENSMUST00000175062 78 ntBASIC1.18□□□□□ -2.22
Scaf4Q6PFF0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Scaf4Q6PFF0 Gm24233-201ENSMUST00000104317 122 ntBASIC1.17□□□□□ -2.22
Scaf4Q6PFF0 Gm26257-201ENSMUST00000122500 107 ntBASIC1.17□□□□□ -2.22
Scaf4Q6PFF0 Gm25641-201ENSMUST00000175135 108 ntBASIC1.17□□□□□ -2.22
Scaf4Q6PFF0 Mir15b-201ENSMUST00000083646 64 ntBASIC1.17□□□□□ -2.22
Scaf4Q6PFF0 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Scaf4Q6PFF0 Gm27450-201ENSMUST00000104632 90 ntBASIC1.16□□□□□ -2.22
Scaf4Q6PFF0 Gm23649-201ENSMUST00000179007 107 ntBASIC1.16□□□□□ -2.22
Scaf4Q6PFF0 Gm27977-201ENSMUST00000185159 111 ntBASIC1.16□□□□□ -2.22
Scaf4Q6PFF0 Gm26438-201ENSMUST00000082593 107 ntBASIC1.16□□□□□ -2.22
Scaf4Q6PFF0 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.15□□□□□ -2.23
Scaf4Q6PFF0 Gm22078-201ENSMUST00000157593 103 ntBASIC1.15□□□□□ -2.23
Scaf4Q6PFF0 Gm25183-201ENSMUST00000157752 106 ntBASIC1.15□□□□□ -2.23
Scaf4Q6PFF0 Gm23416-201ENSMUST00000175520 95 ntBASIC1.15□□□□□ -2.23
Scaf4Q6PFF0 Mir7063-201ENSMUST00000184158 91 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 141.7 ms