Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.45□□□□□ -2.18
Cpsf6Q6NVF9 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.45□□□□□ -2.18
Cpsf6Q6NVF9 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.45□□□□□ -2.18
Cpsf6Q6NVF9 Mir320-201ENSMUST00000083594 82 ntBASIC1.45□□□□□ -2.18
Cpsf6Q6NVF9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.44□□□□□ -2.18
Cpsf6Q6NVF9 Gm22603-201ENSMUST00000157603 96 ntBASIC1.44□□□□□ -2.18
Cpsf6Q6NVF9 Gm45655-201ENSMUST00000211625 160 ntBASIC1.44□□□□□ -2.18
Cpsf6Q6NVF9 Gm26224-201ENSMUST00000082506 80 ntBASIC1.44□□□□□ -2.18
Cpsf6Q6NVF9 Mir30a-201ENSMUST00000083471 71 ntBASIC1.44□□□□□ -2.18
Cpsf6Q6NVF9 Gm25541-201ENSMUST00000116888 126 ntBASIC1.43□□□□□ -2.18
Cpsf6Q6NVF9 Gm23048-201ENSMUST00000157237 129 ntBASIC1.43□□□□□ -2.18
Cpsf6Q6NVF9 Gm25183-201ENSMUST00000157752 106 ntBASIC1.43□□□□□ -2.18
Cpsf6Q6NVF9 Gm23072-201ENSMUST00000158243 123 ntBASIC1.43□□□□□ -2.18
Cpsf6Q6NVF9 Mir7017-201ENSMUST00000184894 62 ntBASIC1.43□□□□□ -2.18
Cpsf6Q6NVF9 Gm27554-201ENSMUST00000185074 98 ntBASIC1.43□□□□□ -2.18
Cpsf6Q6NVF9 Gm24580-201ENSMUST00000103965 131 ntBASIC1.42□□□□□ -2.18
Cpsf6Q6NVF9 Gm25416-201ENSMUST00000104221 107 ntBASIC1.42□□□□□ -2.18
Cpsf6Q6NVF9 Gm23339-201ENSMUST00000158962 139 ntBASIC1.42□□□□□ -2.18
Cpsf6Q6NVF9 Mir377-201ENSMUST00000083504 68 ntBASIC1.42□□□□□ -2.18
Cpsf6Q6NVF9 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 Gm23010-201ENSMUST00000104151 126 ntBASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 Gm24895-201ENSMUST00000122742 74 ntBASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 Mir7673-201ENSMUST00000184567 64 ntBASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 CT030170.1-201ENSMUST00000222183 148 ntBASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 Gm24201-201ENSMUST00000082946 125 ntBASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Cpsf6Q6NVF9 Gm23012-201ENSMUST00000104149 83 ntBASIC1.4□□□□□ -2.19
Cpsf6Q6NVF9 Gm24379-201ENSMUST00000122695 86 ntBASIC1.4□□□□□ -2.19
Cpsf6Q6NVF9 Gm26139-201ENSMUST00000180098 107 ntBASIC1.4□□□□□ -2.19
Cpsf6Q6NVF9 Mir15b-201ENSMUST00000083646 64 ntBASIC1.4□□□□□ -2.19
Cpsf6Q6NVF9 Mir487b-201ENSMUST00000102265 82 ntBASIC1.39□□□□□ -2.19
Cpsf6Q6NVF9 Gm25040-201ENSMUST00000103877 66 ntBASIC1.39□□□□□ -2.19
Cpsf6Q6NVF9 Gm24500-201ENSMUST00000158447 124 ntBASIC1.39□□□□□ -2.19
Cpsf6Q6NVF9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Cpsf6Q6NVF9 Snord69-201ENSMUST00000104024 80 ntBASIC1.38□□□□□ -2.19
Cpsf6Q6NVF9 Gm23221-201ENSMUST00000158118 93 ntBASIC1.38□□□□□ -2.19
Cpsf6Q6NVF9 Gm22087-201ENSMUST00000158339 88 ntBASIC1.38□□□□□ -2.19
Cpsf6Q6NVF9 Snord95-201ENSMUST00000082846 68 ntBASIC1.38□□□□□ -2.19
Cpsf6Q6NVF9 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.38□□□□□ -2.19
Cpsf6Q6NVF9 Gm25968-201ENSMUST00000157167 100 ntBASIC1.37□□□□□ -2.19
Cpsf6Q6NVF9 Gm23289-201ENSMUST00000175615 108 ntBASIC1.37□□□□□ -2.19
Cpsf6Q6NVF9 Gm27420-201ENSMUST00000183823 79 ntBASIC1.37□□□□□ -2.19
Cpsf6Q6NVF9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.37□□□□□ -2.19
Cpsf6Q6NVF9 Mir653-201ENSMUST00000102402 85 ntBASIC1.36□□□□□ -2.19
Cpsf6Q6NVF9 Gm24725-201ENSMUST00000158229 125 ntBASIC1.36□□□□□ -2.19
Cpsf6Q6NVF9 Gm27493-201ENSMUST00000184128 78 ntBASIC1.36□□□□□ -2.19
Cpsf6Q6NVF9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
Cpsf6Q6NVF9 Gm24927-201ENSMUST00000083397 107 ntBASIC1.36□□□□□ -2.19
Cpsf6Q6NVF9 Mir669h-201ENSMUST00000116944 125 ntBASIC1.35□□□□□ -2.19
Cpsf6Q6NVF9 Gm6272-201ENSMUST00000121256 171 ntBASIC1.35□□□□□ -2.19
Cpsf6Q6NVF9 Gm23649-201ENSMUST00000179007 107 ntBASIC1.35□□□□□ -2.19
Cpsf6Q6NVF9 Gm23714-201ENSMUST00000179259 105 ntBASIC1.35□□□□□ -2.19
Cpsf6Q6NVF9 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.35□□□□□ -2.19
Cpsf6Q6NVF9 Gm44408-201ENSMUST00000200205 66 ntBASIC1.35□□□□□ -2.19
Cpsf6Q6NVF9 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.35□□□□□ -2.19
Cpsf6Q6NVF9 Gm26438-201ENSMUST00000082593 107 ntBASIC1.35□□□□□ -2.19
Cpsf6Q6NVF9 Gm24612-201ENSMUST00000083267 107 ntBASIC1.35□□□□□ -2.19
Cpsf6Q6NVF9 Gm13065-201ENSMUST00000119178 141 ntBASIC1.34□□□□□ -2.19
Cpsf6Q6NVF9 Gm26274-201ENSMUST00000157103 321 ntBASIC1.34□□□□□ -2.19
Cpsf6Q6NVF9 Gm23672-201ENSMUST00000157471 107 ntBASIC1.34□□□□□ -2.19
Cpsf6Q6NVF9 Gm23122-201ENSMUST00000157645 103 ntBASIC1.34□□□□□ -2.19
Cpsf6Q6NVF9 Gm25641-201ENSMUST00000175135 108 ntBASIC1.34□□□□□ -2.19
Cpsf6Q6NVF9 Gm27977-201ENSMUST00000185159 111 ntBASIC1.34□□□□□ -2.19
Cpsf6Q6NVF9 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.34□□□□□ -2.2
Cpsf6Q6NVF9 Traj60-201ENSMUST00000167781 54 ntBASIC1.33□□□□□ -2.2
Cpsf6Q6NVF9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.33□□□□□ -2.2
Cpsf6Q6NVF9 Mir3079-201ENSMUST00000175428 90 ntBASIC1.33□□□□□ -2.2
Cpsf6Q6NVF9 Mir8119-201ENSMUST00000183371 129 ntBASIC1.33□□□□□ -2.2
Cpsf6Q6NVF9 Gm27898-201ENSMUST00000183987 80 ntBASIC1.33□□□□□ -2.2
Cpsf6Q6NVF9 Mir1949-202ENSMUST00000199259 70 ntBASIC1.33□□□□□ -2.2
Cpsf6Q6NVF9 Mir500-201ENSMUST00000093600 92 ntBASIC1.33□□□□□ -2.2
Cpsf6Q6NVF9 Gm25440-201ENSMUST00000158279 154 ntBASIC1.32□□□□□ -2.2
Cpsf6Q6NVF9 Gm25831-201ENSMUST00000158924 163 ntBASIC1.32□□□□□ -2.2
Cpsf6Q6NVF9 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.32□□□□□ -2.2
Cpsf6Q6NVF9 Gm22233-201ENSMUST00000157464 114 ntBASIC1.31□□□□□ -2.2
Cpsf6Q6NVF9 Gm25868-201ENSMUST00000158253 114 ntBASIC1.31□□□□□ -2.2
Cpsf6Q6NVF9 Gm27717-201ENSMUST00000183933 151 ntBASIC1.31□□□□□ -2.2
Cpsf6Q6NVF9 Gm22652-201ENSMUST00000083207 131 ntBASIC1.31□□□□□ -2.2
Cpsf6Q6NVF9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
Cpsf6Q6NVF9 Gm24288-201ENSMUST00000157630 144 ntBASIC1.3□□□□□ -2.2
Cpsf6Q6NVF9 Gm23416-201ENSMUST00000175520 95 ntBASIC1.3□□□□□ -2.2
Cpsf6Q6NVF9 Mir3087-201ENSMUST00000199405 56 ntBASIC1.3□□□□□ -2.2
Cpsf6Q6NVF9 Gm22459-201ENSMUST00000082577 108 ntBASIC1.3□□□□□ -2.2
Cpsf6Q6NVF9 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Cpsf6Q6NVF9 Gm22520-201ENSMUST00000158269 129 ntBASIC1.29□□□□□ -2.2
Cpsf6Q6NVF9 Mir7225-201ENSMUST00000184178 54 ntBASIC1.29□□□□□ -2.2
Cpsf6Q6NVF9 Gm23730-201ENSMUST00000083236 107 ntBASIC1.29□□□□□ -2.2
Cpsf6Q6NVF9 Gm27937-201ENSMUST00000183605 88 ntBASIC1.28□□□□□ -2.2
Cpsf6Q6NVF9 Gm23347-201ENSMUST00000083823 82 ntBASIC1.28□□□□□ -2.2
Cpsf6Q6NVF9 Gm26338-201ENSMUST00000102372 110 ntBASIC1.27□□□□□ -2.21
Cpsf6Q6NVF9 Gm23708-201ENSMUST00000104367 123 ntBASIC1.27□□□□□ -2.21
Cpsf6Q6NVF9 Gm24902-201ENSMUST00000158126 123 ntBASIC1.27□□□□□ -2.21
Cpsf6Q6NVF9 Gm16399-201ENSMUST00000181423 219 ntBASIC1.27□□□□□ -2.21
Cpsf6Q6NVF9 Gm24233-201ENSMUST00000104317 122 ntBASIC1.26□□□□□ -2.21
Cpsf6Q6NVF9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.26□□□□□ -2.21
Cpsf6Q6NVF9 Gm25648-201ENSMUST00000177844 79 ntBASIC1.26□□□□□ -2.21
Cpsf6Q6NVF9 Gm24638-201ENSMUST00000179807 132 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 600.7 ms