Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm43911-201ENSMUST00000203097 76 ntBASIC1.55□□□□□ -2.16
Sh3rf1Q69ZI1 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.55□□□□□ -2.16
Sh3rf1Q69ZI1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Sh3rf1Q69ZI1 Gm25541-201ENSMUST00000116888 126 ntBASIC1.54□□□□□ -2.16
Sh3rf1Q69ZI1 Gm22541-201ENSMUST00000158165 127 ntBASIC1.54□□□□□ -2.16
Sh3rf1Q69ZI1 Mir320-201ENSMUST00000083594 82 ntBASIC1.54□□□□□ -2.16
Sh3rf1Q69ZI1 Gm25416-201ENSMUST00000104221 107 ntBASIC1.53□□□□□ -2.16
Sh3rf1Q69ZI1 Mir876-201ENSMUST00000104659 81 ntBASIC1.53□□□□□ -2.16
Sh3rf1Q69ZI1 Snord2-201ENSMUST00000157899 69 ntBASIC1.53□□□□□ -2.16
Sh3rf1Q69ZI1 Gm25328-201ENSMUST00000175013 107 ntBASIC1.53□□□□□ -2.16
Sh3rf1Q69ZI1 Gm27450-201ENSMUST00000104632 90 ntBASIC1.52□□□□□ -2.17
Sh3rf1Q69ZI1 Gm23336-201ENSMUST00000117023 123 ntBASIC1.52□□□□□ -2.17
Sh3rf1Q69ZI1 Gm26257-201ENSMUST00000122500 107 ntBASIC1.52□□□□□ -2.17
Sh3rf1Q69ZI1 Gm24895-201ENSMUST00000122742 74 ntBASIC1.52□□□□□ -2.17
Sh3rf1Q69ZI1 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.52□□□□□ -2.17
Sh3rf1Q69ZI1 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.52□□□□□ -2.17
Sh3rf1Q69ZI1 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.52□□□□□ -2.17
Sh3rf1Q69ZI1 Gm26082-201ENSMUST00000104070 127 ntBASIC1.51□□□□□ -2.17
Sh3rf1Q69ZI1 Gm23130-201ENSMUST00000104252 74 ntBASIC1.51□□□□□ -2.17
Sh3rf1Q69ZI1 Gm25183-201ENSMUST00000157752 106 ntBASIC1.51□□□□□ -2.17
Sh3rf1Q69ZI1 Gm22466-201ENSMUST00000175278 69 ntBASIC1.51□□□□□ -2.17
Sh3rf1Q69ZI1 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.51□□□□□ -2.17
Sh3rf1Q69ZI1 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Sh3rf1Q69ZI1 Gm23339-201ENSMUST00000158962 139 ntBASIC1.5□□□□□ -2.17
Sh3rf1Q69ZI1 Gm23649-201ENSMUST00000179007 107 ntBASIC1.5□□□□□ -2.17
Sh3rf1Q69ZI1 Gm45655-201ENSMUST00000211625 160 ntBASIC1.5□□□□□ -2.17
Sh3rf1Q69ZI1 Gm22673-201ENSMUST00000104415 131 ntBASIC1.49□□□□□ -2.17
Sh3rf1Q69ZI1 Mir3108-201ENSMUST00000175500 79 ntBASIC1.49□□□□□ -2.17
Sh3rf1Q69ZI1 Mir6240-201ENSMUST00000184281 117 ntBASIC1.49□□□□□ -2.17
Sh3rf1Q69ZI1 Gm29432-201ENSMUST00000185397 139 ntBASIC1.49□□□□□ -2.17
Sh3rf1Q69ZI1 Gm44962-201ENSMUST00000206460 279 ntBASIC1.49□□□□□ -2.17
Sh3rf1Q69ZI1 Gm24580-201ENSMUST00000103965 131 ntBASIC1.48□□□□□ -2.17
Sh3rf1Q69ZI1 Gm26274-201ENSMUST00000157103 321 ntBASIC1.48□□□□□ -2.17
Sh3rf1Q69ZI1 Gm24549-201ENSMUST00000158647 139 ntBASIC1.48□□□□□ -2.17
Sh3rf1Q69ZI1 Gm27894-201ENSMUST00000184177 92 ntBASIC1.48□□□□□ -2.17
Sh3rf1Q69ZI1 Gm27554-201ENSMUST00000185074 98 ntBASIC1.48□□□□□ -2.17
Sh3rf1Q69ZI1 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Sh3rf1Q69ZI1 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Sh3rf1Q69ZI1 Gm22039-201ENSMUST00000157278 132 ntBASIC1.47□□□□□ -2.17
Sh3rf1Q69ZI1 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.47□□□□□ -2.17
Sh3rf1Q69ZI1 Gm23558-201ENSMUST00000157823 80 ntBASIC1.47□□□□□ -2.17
Sh3rf1Q69ZI1 Gm27420-201ENSMUST00000183823 79 ntBASIC1.47□□□□□ -2.17
Sh3rf1Q69ZI1 Mir6342-201ENSMUST00000183870 125 ntBASIC1.47□□□□□ -2.17
Sh3rf1Q69ZI1 Mir7665-201ENSMUST00000184907 63 ntBASIC1.47□□□□□ -2.17
Sh3rf1Q69ZI1 Snord96a-201ENSMUST00000082791 81 ntBASIC1.47□□□□□ -2.17
Sh3rf1Q69ZI1 Mir30a-201ENSMUST00000083471 71 ntBASIC1.47□□□□□ -2.17
Sh3rf1Q69ZI1 Gm23221-201ENSMUST00000158118 93 ntBASIC1.46□□□□□ -2.18
Sh3rf1Q69ZI1 Mir100-201ENSMUST00000175270 80 ntBASIC1.46□□□□□ -2.18
Sh3rf1Q69ZI1 Mir376b-201ENSMUST00000195930 82 ntBASIC1.46□□□□□ -2.18
Sh3rf1Q69ZI1 Gm44490-201ENSMUST00000198566 127 ntBASIC1.46□□□□□ -2.18
Sh3rf1Q69ZI1 Gm24927-201ENSMUST00000083397 107 ntBASIC1.46□□□□□ -2.18
Sh3rf1Q69ZI1 Mir377-201ENSMUST00000083504 68 ntBASIC1.46□□□□□ -2.18
Sh3rf1Q69ZI1 Mir15b-201ENSMUST00000083646 64 ntBASIC1.46□□□□□ -2.18
Sh3rf1Q69ZI1 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Sh3rf1Q69ZI1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Sh3rf1Q69ZI1 Gm24271-201ENSMUST00000102327 111 ntBASIC1.45□□□□□ -2.18
Sh3rf1Q69ZI1 Gm25040-201ENSMUST00000103877 66 ntBASIC1.45□□□□□ -2.18
Sh3rf1Q69ZI1 Snord69-201ENSMUST00000104024 80 ntBASIC1.45□□□□□ -2.18
Sh3rf1Q69ZI1 Snord13-201ENSMUST00000157627 104 ntBASIC1.45□□□□□ -2.18
Sh3rf1Q69ZI1 Gm23122-201ENSMUST00000157645 103 ntBASIC1.45□□□□□ -2.18
Sh3rf1Q69ZI1 Gm25936-201ENSMUST00000179952 114 ntBASIC1.45□□□□□ -2.18
Sh3rf1Q69ZI1 Gm25274-201ENSMUST00000104296 135 ntBASIC1.44□□□□□ -2.18
Sh3rf1Q69ZI1 Mir3968-201ENSMUST00000175355 100 ntBASIC1.44□□□□□ -2.18
Sh3rf1Q69ZI1 Gm23410-201ENSMUST00000179967 107 ntBASIC1.44□□□□□ -2.18
Sh3rf1Q69ZI1 Gm24201-201ENSMUST00000082946 125 ntBASIC1.44□□□□□ -2.18
Sh3rf1Q69ZI1 Gm22505-201ENSMUST00000082956 108 ntBASIC1.44□□□□□ -2.18
Sh3rf1Q69ZI1 Gm22363-201ENSMUST00000083100 108 ntBASIC1.44□□□□□ -2.18
Sh3rf1Q69ZI1 Gm23814-201ENSMUST00000083230 102 ntBASIC1.44□□□□□ -2.18
Sh3rf1Q69ZI1 Gm25652-201ENSMUST00000083780 103 ntBASIC1.44□□□□□ -2.18
Sh3rf1Q69ZI1 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Sh3rf1Q69ZI1 Gm23072-201ENSMUST00000158243 123 ntBASIC1.43□□□□□ -2.18
Sh3rf1Q69ZI1 Gm26139-201ENSMUST00000180098 107 ntBASIC1.43□□□□□ -2.18
Sh3rf1Q69ZI1 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.43□□□□□ -2.18
Sh3rf1Q69ZI1 Gm44483-201ENSMUST00000197203 97 ntBASIC1.43□□□□□ -2.18
Sh3rf1Q69ZI1 Mir6962-201ENSMUST00000199512 63 ntBASIC1.43□□□□□ -2.18
Sh3rf1Q69ZI1 Gm26224-201ENSMUST00000082506 80 ntBASIC1.43□□□□□ -2.18
Sh3rf1Q69ZI1 Gm25641-201ENSMUST00000175135 108 ntBASIC1.42□□□□□ -2.18
Sh3rf1Q69ZI1 Gm27493-201ENSMUST00000184128 78 ntBASIC1.42□□□□□ -2.18
Sh3rf1Q69ZI1 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.42□□□□□ -2.18
Sh3rf1Q69ZI1 Gm25968-201ENSMUST00000157167 100 ntBASIC1.41□□□□□ -2.18
Sh3rf1Q69ZI1 Gm23672-201ENSMUST00000157471 107 ntBASIC1.41□□□□□ -2.18
Sh3rf1Q69ZI1 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.41□□□□□ -2.18
Sh3rf1Q69ZI1 Gm27977-201ENSMUST00000185159 111 ntBASIC1.41□□□□□ -2.18
Sh3rf1Q69ZI1 Gm23012-201ENSMUST00000104149 83 ntBASIC1.4□□□□□ -2.19
Sh3rf1Q69ZI1 Gm24624-201ENSMUST00000082617 164 ntBASIC1.4□□□□□ -2.19
Sh3rf1Q69ZI1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Sh3rf1Q69ZI1 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Sh3rf1Q69ZI1 Mir669h-201ENSMUST00000116944 125 ntBASIC1.39□□□□□ -2.19
Sh3rf1Q69ZI1 Gm6272-201ENSMUST00000121256 171 ntBASIC1.39□□□□□ -2.19
Sh3rf1Q69ZI1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.39□□□□□ -2.19
Sh3rf1Q69ZI1 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.39□□□□□ -2.19
Sh3rf1Q69ZI1 Mir1949-202ENSMUST00000199259 70 ntBASIC1.39□□□□□ -2.19
Sh3rf1Q69ZI1 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.39□□□□□ -2.19
Sh3rf1Q69ZI1 Gm22652-201ENSMUST00000083207 131 ntBASIC1.39□□□□□ -2.19
Sh3rf1Q69ZI1 Mir500-201ENSMUST00000093600 92 ntBASIC1.39□□□□□ -2.19
Sh3rf1Q69ZI1 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Mir487b-201ENSMUST00000102265 82 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Gm25170-201ENSMUST00000104191 129 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Gm13065-201ENSMUST00000119178 141 ntBASIC1.38□□□□□ -2.19
Sh3rf1Q69ZI1 Gm22559-201ENSMUST00000157329 134 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms