Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm25300-201ENSMUST00000175284 84 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Mir1954-201ENSMUST00000175595 86 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm6293-201ENSMUST00000050339 195 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm24494-201ENSMUST00000083804 81 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm24701-201ENSMUST00000101946 105 ntBASIC1.4□□□□□ -2.19
Trim28Q62318 Gm22786-201ENSMUST00000104086 122 ntBASIC1.4□□□□□ -2.19
Trim28Q62318 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.4□□□□□ -2.19
Trim28Q62318 Gm22559-201ENSMUST00000157329 134 ntBASIC1.4□□□□□ -2.19
Trim28Q62318 Gm26363-201ENSMUST00000158866 83 ntBASIC1.4□□□□□ -2.19
Trim28Q62318 Gm27297-201ENSMUST00000183395 105 ntBASIC1.4□□□□□ -2.19
Trim28Q62318 Gm44490-201ENSMUST00000198566 127 ntBASIC1.4□□□□□ -2.19
Trim28Q62318 Gm25629-201ENSMUST00000084001 107 ntBASIC1.4□□□□□ -2.19
Trim28Q62318 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trim28Q62318 Gm24396-201ENSMUST00000116905 93 ntBASIC1.39□□□□□ -2.19
Trim28Q62318 Gm27549-201ENSMUST00000183508 62 ntBASIC1.39□□□□□ -2.19
Trim28Q62318 Gm44469-201ENSMUST00000198558 79 ntBASIC1.39□□□□□ -2.19
Trim28Q62318 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trim28Q62318 Gm24208-201ENSMUST00000082783 135 ntBASIC1.39□□□□□ -2.19
Trim28Q62318 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Mir741-201ENSMUST00000103931 71 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm25609-201ENSMUST00000104019 104 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm25663-201ENSMUST00000157698 135 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm24547-201ENSMUST00000158649 149 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm23477-201ENSMUST00000158882 128 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm22801-201ENSMUST00000175624 84 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm16399-201ENSMUST00000181423 219 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm36956-201ENSMUST00000193830 214 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm44396-201ENSMUST00000199843 114 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm24134-201ENSMUST00000083361 71 ntBASIC1.38□□□□□ -2.19
Trim28Q62318 Gm25274-201ENSMUST00000104296 135 ntBASIC1.37□□□□□ -2.19
Trim28Q62318 Gm24983-201ENSMUST00000104457 69 ntBASIC1.37□□□□□ -2.19
Trim28Q62318 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trim28Q62318 Gm23339-201ENSMUST00000158962 139 ntBASIC1.37□□□□□ -2.19
Trim28Q62318 Gm25693-201ENSMUST00000175443 85 ntBASIC1.37□□□□□ -2.19
Trim28Q62318 Gm23291-201ENSMUST00000175611 78 ntBASIC1.37□□□□□ -2.19
Trim28Q62318 Gm24202-201ENSMUST00000082948 103 ntBASIC1.37□□□□□ -2.19
Trim28Q62318 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trim28Q62318 Gm25506-201ENSMUST00000104339 70 ntBASIC1.36□□□□□ -2.19
Trim28Q62318 Gm24290-201ENSMUST00000157634 96 ntBASIC1.36□□□□□ -2.19
Trim28Q62318 Gm25991-201ENSMUST00000102439 99 ntBASIC1.35□□□□□ -2.19
Trim28Q62318 Gm22030-201ENSMUST00000116942 63 ntBASIC1.35□□□□□ -2.19
Trim28Q62318 Gm22663-201ENSMUST00000158721 102 ntBASIC1.35□□□□□ -2.19
Trim28Q62318 Gm43907-201ENSMUST00000203128 117 ntBASIC1.35□□□□□ -2.19
Trim28Q62318 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.35□□□□□ -2.19
Trim28Q62318 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.35□□□□□ -2.19
Trim28Q62318 Gm25652-201ENSMUST00000083780 103 ntBASIC1.35□□□□□ -2.19
Trim28Q62318 Mir494-201ENSMUST00000093632 85 ntBASIC1.35□□□□□ -2.19
Trim28Q62318 Gm22673-201ENSMUST00000104415 131 ntBASIC1.34□□□□□ -2.19
Trim28Q62318 Gm24401-201ENSMUST00000157868 91 ntBASIC1.34□□□□□ -2.19
Trim28Q62318 Gm24073-201ENSMUST00000158177 106 ntBASIC1.34□□□□□ -2.19
Trim28Q62318 Gm23410-201ENSMUST00000179967 107 ntBASIC1.34□□□□□ -2.19
Trim28Q62318 Gm22505-201ENSMUST00000082956 108 ntBASIC1.34□□□□□ -2.19
Trim28Q62318 Gm22363-201ENSMUST00000083100 108 ntBASIC1.34□□□□□ -2.19
Trim28Q62318 Gm23814-201ENSMUST00000083230 102 ntBASIC1.34□□□□□ -2.19
Trim28Q62318 Gm6985-201ENSMUST00000121255 271 ntBASIC1.33□□□□□ -2.2
Trim28Q62318 Gm22788-201ENSMUST00000157876 61 ntBASIC1.33□□□□□ -2.2
Trim28Q62318 Gm25328-201ENSMUST00000175013 107 ntBASIC1.33□□□□□ -2.2
Trim28Q62318 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Trim28Q62318 Gm25128-201ENSMUST00000083339 76 ntBASIC1.33□□□□□ -2.2
Trim28Q62318 Mir1961-201ENSMUST00000158643 112 ntBASIC1.32□□□□□ -2.2
Trim28Q62318 Gm25366-201ENSMUST00000158845 124 ntBASIC1.32□□□□□ -2.2
Trim28Q62318 Gm22406-201ENSMUST00000174923 93 ntBASIC1.32□□□□□ -2.2
Trim28Q62318 Snora75-201ENSMUST00000082903 133 ntBASIC1.32□□□□□ -2.2
Trim28Q62318 Mir200b-201ENSMUST00000083615 70 ntBASIC1.32□□□□□ -2.2
Trim28Q62318 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
Trim28Q62318 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.3□□□□□ -2.2
Trim28Q62318 Gm25496-201ENSMUST00000104430 120 ntBASIC1.3□□□□□ -2.2
Trim28Q62318 Gm23991-201ENSMUST00000117033 93 ntBASIC1.29□□□□□ -2.2
Trim28Q62318 Mir3108-201ENSMUST00000175500 79 ntBASIC1.29□□□□□ -2.2
Trim28Q62318 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.28□□□□□ -2.2
Trim28Q62318 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Trim28Q62318 Gm24580-201ENSMUST00000103965 131 ntBASIC1.28□□□□□ -2.2
Trim28Q62318 Gm23130-201ENSMUST00000104252 74 ntBASIC1.28□□□□□ -2.2
Trim28Q62318 Gm24500-201ENSMUST00000158447 124 ntBASIC1.28□□□□□ -2.2
Trim28Q62318 Gm23114-201ENSMUST00000158478 117 ntBASIC1.28□□□□□ -2.2
Trim28Q62318 Mir6380-201ENSMUST00000184334 81 ntBASIC1.28□□□□□ -2.2
Trim28Q62318 Snord45b-201ENSMUST00000082797 71 ntBASIC1.28□□□□□ -2.2
Trim28Q62318 Mir448-201ENSMUST00000083516 112 ntBASIC1.28□□□□□ -2.2
Trim28Q62318 Gm27420-201ENSMUST00000183823 79 ntBASIC1.27□□□□□ -2.21
Trim28Q62318 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.27□□□□□ -2.21
Trim28Q62318 Gm25170-201ENSMUST00000104191 129 ntBASIC1.26□□□□□ -2.21
Trim28Q62318 Gm25183-201ENSMUST00000157752 106 ntBASIC1.26□□□□□ -2.21
Trim28Q62318 Gm24808-201ENSMUST00000157993 118 ntBASIC1.26□□□□□ -2.21
Trim28Q62318 Mir1933-201ENSMUST00000158930 88 ntBASIC1.26□□□□□ -2.21
Trim28Q62318 Mir6342-201ENSMUST00000183870 125 ntBASIC1.26□□□□□ -2.21
Trim28Q62318 Gm27993-201ENSMUST00000184362 85 ntBASIC1.26□□□□□ -2.21
Trim28Q62318 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.26□□□□□ -2.21
Trim28Q62318 Gm26224-201ENSMUST00000082506 80 ntBASIC1.26□□□□□ -2.21
Trim28Q62318 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
Trim28Q62318 Gm25968-201ENSMUST00000157167 100 ntBASIC1.25□□□□□ -2.21
Trim28Q62318 Snord2-201ENSMUST00000157899 69 ntBASIC1.25□□□□□ -2.21
Trim28Q62318 Gm23340-201ENSMUST00000158955 123 ntBASIC1.25□□□□□ -2.21
Trim28Q62318 Gm27656-201ENSMUST00000185055 80 ntBASIC1.25□□□□□ -2.21
Trim28Q62318 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Trim28Q62318 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Trim28Q62318 Mir709-201ENSMUST00000102190 88 ntBASIC1.24□□□□□ -2.21
Trim28Q62318 Gm22233-201ENSMUST00000157464 114 ntBASIC1.24□□□□□ -2.21
Trim28Q62318 Gm23893-201ENSMUST00000158106 134 ntBASIC1.24□□□□□ -2.21
Trim28Q62318 Gm25868-201ENSMUST00000158253 114 ntBASIC1.24□□□□□ -2.21
Trim28Q62318 Snord69-201ENSMUST00000104024 80 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 183 ms