Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm24920-201ENSMUST00000083018 85 ntBASIC0.92□□□□□ -2.26
CtcfQ61164 Snord32a-201ENSMUST00000083285 83 ntBASIC0.92□□□□□ -2.26
CtcfQ61164 Gm22689-201ENSMUST00000102452 110 ntBASIC0.91□□□□□ -2.26
CtcfQ61164 Gm22030-201ENSMUST00000116942 63 ntBASIC0.91□□□□□ -2.26
CtcfQ61164 Gm22679-201ENSMUST00000116975 100 ntBASIC0.91□□□□□ -2.26
CtcfQ61164 Gm22140-201ENSMUST00000158745 120 ntBASIC0.91□□□□□ -2.26
CtcfQ61164 Gm27297-201ENSMUST00000183395 105 ntBASIC0.91□□□□□ -2.26
CtcfQ61164 Mir101a-201ENSMUST00000083517 83 ntBASIC0.91□□□□□ -2.26
CtcfQ61164 Mir216b-201ENSMUST00000102363 86 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm23528-201ENSMUST00000104571 132 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm24290-201ENSMUST00000157634 96 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm23278-201ENSMUST00000157911 143 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm26712-201ENSMUST00000180813 217 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm27980-201ENSMUST00000184094 169 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm27977-201ENSMUST00000185159 111 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm43927-201ENSMUST00000204599 117 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm22805-201ENSMUST00000082739 107 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm25681-201ENSMUST00000083938 106 ntBASIC0.9□□□□□ -2.27
CtcfQ61164 Gm22048-201ENSMUST00000104721 89 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 Gm22677-201ENSMUST00000116977 108 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 Gm22605-201ENSMUST00000158289 108 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 Gm24500-201ENSMUST00000158447 124 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 Gm24637-201ENSMUST00000158674 85 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 Mir15a-201ENSMUST00000175266 84 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 Gm25693-201ENSMUST00000175443 85 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 Gm43944-201ENSMUST00000205220 120 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC0.89□□□□□ -2.27
CtcfQ61164 Mir695-201ENSMUST00000102261 109 ntBASIC0.88□□□□□ -2.27
CtcfQ61164 Gm22466-201ENSMUST00000175278 69 ntBASIC0.88□□□□□ -2.27
CtcfQ61164 Gm20108-201ENSMUST00000219977 153 ntBASIC0.88□□□□□ -2.27
CtcfQ61164 Gm24697-201ENSMUST00000083881 107 ntBASIC0.88□□□□□ -2.27
CtcfQ61164 Gm22786-201ENSMUST00000104086 122 ntBASIC0.87□□□□□ -2.27
CtcfQ61164 Gm24648-201ENSMUST00000157111 132 ntBASIC0.87□□□□□ -2.27
CtcfQ61164 Gm24549-201ENSMUST00000158647 139 ntBASIC0.87□□□□□ -2.27
CtcfQ61164 Mir466m-201ENSMUST00000175052 84 ntBASIC0.87□□□□□ -2.27
CtcfQ61164 Gm25229-201ENSMUST00000178587 79 ntBASIC0.87□□□□□ -2.27
CtcfQ61164 Gm26441-201ENSMUST00000082590 104 ntBASIC0.87□□□□□ -2.27
CtcfQ61164 Gm24208-201ENSMUST00000082783 135 ntBASIC0.87□□□□□ -2.27
CtcfQ61164 Gm26338-201ENSMUST00000102372 110 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Gm6272-201ENSMUST00000121256 171 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Gm23468-201ENSMUST00000157125 108 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Gm23020-201ENSMUST00000158766 253 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Gm27639-201ENSMUST00000184937 85 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Mir509-201ENSMUST00000196089 75 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Gm23301-201ENSMUST00000082713 65 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Mir30a-201ENSMUST00000083471 71 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Mir377-201ENSMUST00000083504 68 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Mir29a-201ENSMUST00000083676 88 ntBASIC0.86□□□□□ -2.27
CtcfQ61164 Gm25056-201ENSMUST00000157372 62 ntBASIC0.85□□□□□ -2.27
CtcfQ61164 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.85□□□□□ -2.27
CtcfQ61164 Mir3079-201ENSMUST00000175428 90 ntBASIC0.85□□□□□ -2.27
CtcfQ61164 Gm24527-201ENSMUST00000082920 107 ntBASIC0.85□□□□□ -2.27
CtcfQ61164 Mir362-201ENSMUST00000093592 65 ntBASIC0.85□□□□□ -2.27
CtcfQ61164 Gm25112-201ENSMUST00000122680 104 ntBASIC0.84□□□□□ -2.27
CtcfQ61164 Gm24384-201ENSMUST00000122693 75 ntBASIC0.84□□□□□ -2.27
CtcfQ61164 Gm22732-201ENSMUST00000158093 121 ntBASIC0.84□□□□□ -2.27
CtcfQ61164 Gm22541-201ENSMUST00000158165 127 ntBASIC0.84□□□□□ -2.27
CtcfQ61164 Gm27686-201ENSMUST00000185123 91 ntBASIC0.84□□□□□ -2.27
CtcfQ61164 Gm23531-201ENSMUST00000104567 68 ntBASIC0.83□□□□□ -2.28
CtcfQ61164 Gm22205-201ENSMUST00000122655 71 ntBASIC0.83□□□□□ -2.28
CtcfQ61164 Gm22788-201ENSMUST00000157876 61 ntBASIC0.83□□□□□ -2.28
CtcfQ61164 Mir100-201ENSMUST00000175270 80 ntBASIC0.83□□□□□ -2.28
CtcfQ61164 Gm38113-201ENSMUST00000193704 201 ntBASIC0.83□□□□□ -2.28
CtcfQ61164 Gm3702-201ENSMUST00000211754 346 ntBASIC0.83□□□□□ -2.28
CtcfQ61164 DQ267101-201ENSMUST00000082562 73 ntBASIC0.83□□□□□ -2.28
CtcfQ61164 Gm26478-201ENSMUST00000122611 133 ntBASIC0.82□□□□□ -2.28
CtcfQ61164 Gm25885-201ENSMUST00000157779 109 ntBASIC0.82□□□□□ -2.28
CtcfQ61164 Gm23853-201ENSMUST00000158375 104 ntBASIC0.82□□□□□ -2.28
CtcfQ61164 Mir6342-201ENSMUST00000183870 125 ntBASIC0.82□□□□□ -2.28
CtcfQ61164 Gm27975-201ENSMUST00000184400 101 ntBASIC0.82□□□□□ -2.28
CtcfQ61164 Gm25696-201ENSMUST00000082900 105 ntBASIC0.82□□□□□ -2.28
CtcfQ61164 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.82□□□□□ -2.28
CtcfQ61164 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
CtcfQ61164 Gm23203-201ENSMUST00000104374 107 ntBASIC0.81□□□□□ -2.28
CtcfQ61164 Gm23989-201ENSMUST00000117030 66 ntBASIC0.81□□□□□ -2.28
CtcfQ61164 Gm23788-201ENSMUST00000122535 106 ntBASIC0.81□□□□□ -2.28
CtcfQ61164 Gm25040-201ENSMUST00000103877 66 ntBASIC0.8□□□□□ -2.28
CtcfQ61164 Gm24678-201ENSMUST00000158756 104 ntBASIC0.8□□□□□ -2.28
CtcfQ61164 Gm23291-201ENSMUST00000175611 78 ntBASIC0.8□□□□□ -2.28
CtcfQ61164 Gm43907-201ENSMUST00000203128 117 ntBASIC0.8□□□□□ -2.28
CtcfQ61164 Gm14947-201ENSMUST00000133704 303 ntBASIC0.79□□□□□ -2.28
CtcfQ61164 Mir6364-201ENSMUST00000183396 86 ntBASIC0.79□□□□□ -2.28
CtcfQ61164 Gm44211-201ENSMUST00000204867 145 ntBASIC0.79□□□□□ -2.28
CtcfQ61164 Gm23735-201ENSMUST00000082551 134 ntBASIC0.79□□□□□ -2.28
CtcfQ61164 Gm25138-201ENSMUST00000083248 136 ntBASIC0.79□□□□□ -2.28
CtcfQ61164 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.78□□□□□ -2.28
CtcfQ61164 Gm22033-201ENSMUST00000116947 90 ntBASIC0.78□□□□□ -2.28
CtcfQ61164 Gm24323-201ENSMUST00000175342 77 ntBASIC0.78□□□□□ -2.28
CtcfQ61164 Gm26285-201ENSMUST00000177923 107 ntBASIC0.78□□□□□ -2.28
CtcfQ61164 Mir1949-202ENSMUST00000199259 70 ntBASIC0.78□□□□□ -2.28
CtcfQ61164 Gm23622-201ENSMUST00000082460 107 ntBASIC0.78□□□□□ -2.28
CtcfQ61164 Snora75-201ENSMUST00000082903 133 ntBASIC0.78□□□□□ -2.28
CtcfQ61164 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.78□□□□□ -2.28
CtcfQ61164 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
CtcfQ61164 Gm25378-201ENSMUST00000104333 129 ntBASIC0.77□□□□□ -2.29
CtcfQ61164 Gm25108-201ENSMUST00000122473 78 ntBASIC0.77□□□□□ -2.29
CtcfQ61164 Gm25322-201ENSMUST00000122556 104 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms