Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm22100-201ENSMUST00000157926 63 ntBASIC1.87□□□□□ -2.11
Gm28047Q3US59 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Gm28047Q3US59 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Gm28047Q3US59 Gm23208-201ENSMUST00000158666 127 ntBASIC1.86□□□□□ -2.11
Gm28047Q3US59 Mir6351-201ENSMUST00000183826 99 ntBASIC1.86□□□□□ -2.11
Gm28047Q3US59 Mir6352-201ENSMUST00000184495 116 ntBASIC1.86□□□□□ -2.11
Gm28047Q3US59 Mir3096-201ENSMUST00000116685 71 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Snord2-201ENSMUST00000157899 69 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Gm22550-201ENSMUST00000179774 107 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Gm22060-201ENSMUST00000082558 107 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Gm22357-201ENSMUST00000082882 83 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Gm28047Q3US59 Gm23590-201ENSMUST00000157661 104 ntBASIC1.84□□□□□ -2.11
Gm28047Q3US59 Gm24174-201ENSMUST00000158933 111 ntBASIC1.84□□□□□ -2.11
Gm28047Q3US59 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.84□□□□□ -2.11
Gm28047Q3US59 Gm44384-201ENSMUST00000200208 114 ntBASIC1.84□□□□□ -2.11
Gm28047Q3US59 Gm24290-201ENSMUST00000157634 96 ntBASIC1.83□□□□□ -2.12
Gm28047Q3US59 Gm26089-201ENSMUST00000157898 107 ntBASIC1.83□□□□□ -2.12
Gm28047Q3US59 Gm22431-201ENSMUST00000158545 107 ntBASIC1.83□□□□□ -2.12
Gm28047Q3US59 Gm25693-201ENSMUST00000175443 85 ntBASIC1.83□□□□□ -2.12
Gm28047Q3US59 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Gm28047Q3US59 Gm22786-201ENSMUST00000104086 122 ntBASIC1.82□□□□□ -2.12
Gm28047Q3US59 Mir873a-201ENSMUST00000104863 77 ntBASIC1.82□□□□□ -2.12
Gm28047Q3US59 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.82□□□□□ -2.12
Gm28047Q3US59 Gm22914-201ENSMUST00000175195 77 ntBASIC1.82□□□□□ -2.12
Gm28047Q3US59 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Gm28047Q3US59 Gm22030-201ENSMUST00000116942 63 ntBASIC1.81□□□□□ -2.12
Gm28047Q3US59 Gm18433-201ENSMUST00000192747 197 ntBASIC1.81□□□□□ -2.12
Gm28047Q3US59 Gm38274-201ENSMUST00000195689 148 ntBASIC1.81□□□□□ -2.12
Gm28047Q3US59 Mir1955-201ENSMUST00000158014 98 ntBASIC1.8□□□□□ -2.12
Gm28047Q3US59 Gm22663-201ENSMUST00000158721 102 ntBASIC1.8□□□□□ -2.12
Gm28047Q3US59 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.8□□□□□ -2.12
Gm28047Q3US59 Gm45754-201ENSMUST00000212380 279 ntBASIC1.8□□□□□ -2.12
Gm28047Q3US59 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm26338-201ENSMUST00000102372 110 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm25832-201ENSMUST00000104140 130 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm24070-201ENSMUST00000104519 130 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm25779-201ENSMUST00000116710 95 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm24401-201ENSMUST00000157868 91 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Mir3057-201ENSMUST00000175040 91 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Mir5104-201ENSMUST00000175319 94 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm44488-201ENSMUST00000199467 119 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm25068-201ENSMUST00000103895 110 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm25309-201ENSMUST00000116728 126 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm24476-201ENSMUST00000157437 131 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm22802-201ENSMUST00000175621 89 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm36956-201ENSMUST00000193830 214 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm24165-201ENSMUST00000082718 128 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm22761-201ENSMUST00000102278 96 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Gm22165-201ENSMUST00000158414 103 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Gm23714-201ENSMUST00000179259 105 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.77□□□□□ -2.13
Gm28047Q3US59 Gm26227-201ENSMUST00000082510 101 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Snord57-201ENSMUST00000083338 72 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Mir148b-201ENSMUST00000083626 97 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm23991-201ENSMUST00000117033 93 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm25423-201ENSMUST00000157609 107 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm22403-201ENSMUST00000174919 84 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm26438-201ENSMUST00000082593 107 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm25110-201ENSMUST00000116684 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm25775-201ENSMUST00000116716 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm24795-201ENSMUST00000116737 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm25171-201ENSMUST00000116926 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm15115-201ENSMUST00000121145 264 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm24379-201ENSMUST00000122695 86 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm24651-201ENSMUST00000157107 107 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm22862-201ENSMUST00000178593 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm22302-201ENSMUST00000082657 106 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm22298-201ENSMUST00000082662 133 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm22603-201ENSMUST00000157603 96 ntBASIC1.74□□□□□ -2.13
Gm28047Q3US59 Gm24222-201ENSMUST00000158834 93 ntBASIC1.74□□□□□ -2.13
Gm28047Q3US59 Gm23060-201ENSMUST00000102345 109 ntBASIC1.73□□□□□ -2.13
Gm28047Q3US59 Mir669h-201ENSMUST00000116944 125 ntBASIC1.73□□□□□ -2.13
Gm28047Q3US59 Gm24262-201ENSMUST00000157431 144 ntBASIC1.73□□□□□ -2.13
Gm28047Q3US59 Gm22809-201ENSMUST00000082743 156 ntBASIC1.73□□□□□ -2.13
Gm28047Q3US59 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Gm28047Q3US59 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm23267-201ENSMUST00000178490 132 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm22260-201ENSMUST00000178643 107 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm44962-201ENSMUST00000206460 279 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm44948-201ENSMUST00000209050 149 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm22801-201ENSMUST00000175624 84 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 Gm27993-201ENSMUST00000184362 85 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 Gm28794-201ENSMUST00000185276 136 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 Mir320-201ENSMUST00000083594 82 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 Mir717-201ENSMUST00000102259 109 ntBASIC1.7□□□□□ -2.14
Gm28047Q3US59 Gm23012-201ENSMUST00000104149 83 ntBASIC1.7□□□□□ -2.14
Gm28047Q3US59 Gm25416-201ENSMUST00000104221 107 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 163.3 ms