Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Gm22100-201ENSMUST00000157926 63 ntBASIC1.87□□□□□ -2.11
Gm28047Q3US59 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Gm28047Q3US59 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Gm28047Q3US59 Gm23208-201ENSMUST00000158666 127 ntBASIC1.86□□□□□ -2.11
Gm28047Q3US59 Mir6351-201ENSMUST00000183826 99 ntBASIC1.86□□□□□ -2.11
Gm28047Q3US59 Mir6352-201ENSMUST00000184495 116 ntBASIC1.86□□□□□ -2.11
Gm28047Q3US59 Mir3096-201ENSMUST00000116685 71 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Snord2-201ENSMUST00000157899 69 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Gm22550-201ENSMUST00000179774 107 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Gm22060-201ENSMUST00000082558 107 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Gm22357-201ENSMUST00000082882 83 ntBASIC1.85□□□□□ -2.11
Gm28047Q3US59 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Gm28047Q3US59 Gm23590-201ENSMUST00000157661 104 ntBASIC1.84□□□□□ -2.11
Gm28047Q3US59 Gm24174-201ENSMUST00000158933 111 ntBASIC1.84□□□□□ -2.11
Gm28047Q3US59 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.84□□□□□ -2.11
Gm28047Q3US59 Gm44384-201ENSMUST00000200208 114 ntBASIC1.84□□□□□ -2.11
Gm28047Q3US59 Gm24290-201ENSMUST00000157634 96 ntBASIC1.83□□□□□ -2.12
Gm28047Q3US59 Gm26089-201ENSMUST00000157898 107 ntBASIC1.83□□□□□ -2.12
Gm28047Q3US59 Gm22431-201ENSMUST00000158545 107 ntBASIC1.83□□□□□ -2.12
Gm28047Q3US59 Gm25693-201ENSMUST00000175443 85 ntBASIC1.83□□□□□ -2.12
Gm28047Q3US59 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Gm28047Q3US59 Gm22786-201ENSMUST00000104086 122 ntBASIC1.82□□□□□ -2.12
Gm28047Q3US59 Mir873a-201ENSMUST00000104863 77 ntBASIC1.82□□□□□ -2.12
Gm28047Q3US59 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.82□□□□□ -2.12
Gm28047Q3US59 Gm22914-201ENSMUST00000175195 77 ntBASIC1.82□□□□□ -2.12
Gm28047Q3US59 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Gm28047Q3US59 Gm22030-201ENSMUST00000116942 63 ntBASIC1.81□□□□□ -2.12
Gm28047Q3US59 Gm18433-201ENSMUST00000192747 197 ntBASIC1.81□□□□□ -2.12
Gm28047Q3US59 Gm38274-201ENSMUST00000195689 148 ntBASIC1.81□□□□□ -2.12
Gm28047Q3US59 Mir1955-201ENSMUST00000158014 98 ntBASIC1.8□□□□□ -2.12
Gm28047Q3US59 Gm22663-201ENSMUST00000158721 102 ntBASIC1.8□□□□□ -2.12
Gm28047Q3US59 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.8□□□□□ -2.12
Gm28047Q3US59 Gm45754-201ENSMUST00000212380 279 ntBASIC1.8□□□□□ -2.12
Gm28047Q3US59 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm26338-201ENSMUST00000102372 110 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm25832-201ENSMUST00000104140 130 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm24070-201ENSMUST00000104519 130 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm25779-201ENSMUST00000116710 95 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm24401-201ENSMUST00000157868 91 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Mir3057-201ENSMUST00000175040 91 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Mir5104-201ENSMUST00000175319 94 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm44488-201ENSMUST00000199467 119 ntBASIC1.79□□□□□ -2.12
Gm28047Q3US59 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Gm28047Q3US59 Gm25068-201ENSMUST00000103895 110 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm25309-201ENSMUST00000116728 126 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm24476-201ENSMUST00000157437 131 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm22802-201ENSMUST00000175621 89 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm36956-201ENSMUST00000193830 214 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm24165-201ENSMUST00000082718 128 ntBASIC1.78□□□□□ -2.12
Gm28047Q3US59 Gm22761-201ENSMUST00000102278 96 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Gm22165-201ENSMUST00000158414 103 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Gm23714-201ENSMUST00000179259 105 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC1.77□□□□□ -2.13
Gm28047Q3US59 Gm26227-201ENSMUST00000082510 101 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Snord57-201ENSMUST00000083338 72 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Mir148b-201ENSMUST00000083626 97 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 n-R5s12-201ENSMUST00000083785 119 ntBASIC1.77□□□□□ -2.13
Gm28047Q3US59 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm23991-201ENSMUST00000117033 93 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm25423-201ENSMUST00000157609 107 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm22403-201ENSMUST00000174919 84 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm26438-201ENSMUST00000082593 107 ntBASIC1.76□□□□□ -2.13
Gm28047Q3US59 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm25110-201ENSMUST00000116684 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm25775-201ENSMUST00000116716 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm24795-201ENSMUST00000116737 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm25171-201ENSMUST00000116926 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm15115-201ENSMUST00000121145 264 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm24379-201ENSMUST00000122695 86 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm24651-201ENSMUST00000157107 107 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm22862-201ENSMUST00000178593 121 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm22302-201ENSMUST00000082657 106 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm22298-201ENSMUST00000082662 133 ntBASIC1.75□□□□□ -2.13
Gm28047Q3US59 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Gm28047Q3US59 Gm22603-201ENSMUST00000157603 96 ntBASIC1.74□□□□□ -2.13
Gm28047Q3US59 Gm24222-201ENSMUST00000158834 93 ntBASIC1.74□□□□□ -2.13
Gm28047Q3US59 Gm23060-201ENSMUST00000102345 109 ntBASIC1.73□□□□□ -2.13
Gm28047Q3US59 Mir669h-201ENSMUST00000116944 125 ntBASIC1.73□□□□□ -2.13
Gm28047Q3US59 Gm24262-201ENSMUST00000157431 144 ntBASIC1.73□□□□□ -2.13
Gm28047Q3US59 Gm22809-201ENSMUST00000082743 156 ntBASIC1.73□□□□□ -2.13
Gm28047Q3US59 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Gm28047Q3US59 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm23267-201ENSMUST00000178490 132 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm22260-201ENSMUST00000178643 107 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm44962-201ENSMUST00000206460 279 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm44948-201ENSMUST00000209050 149 ntBASIC1.72□□□□□ -2.13
Gm28047Q3US59 Gm22801-201ENSMUST00000175624 84 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 Gm27993-201ENSMUST00000184362 85 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 Gm28794-201ENSMUST00000185276 136 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 Mir320-201ENSMUST00000083594 82 ntBASIC1.71□□□□□ -2.14
Gm28047Q3US59 Mir717-201ENSMUST00000102259 109 ntBASIC1.7□□□□□ -2.14
Gm28047Q3US59 Gm23012-201ENSMUST00000104149 83 ntBASIC1.7□□□□□ -2.14
Gm28047Q3US59 Gm25416-201ENSMUST00000104221 107 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 144.7 ms