Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.04□□□□□ -2.42
Trafd1Q3UDK1 Gm25889-201ENSMUST00000157775 107 ntBASIC-0.04□□□□□ -2.42
Trafd1Q3UDK1 Mir6237-201ENSMUST00000183808 91 ntBASIC-0.04□□□□□ -2.42
Trafd1Q3UDK1 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.04□□□□□ -2.42
Trafd1Q3UDK1 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.04□□□□□ -2.42
Trafd1Q3UDK1 Gm25812-201ENSMUST00000082751 103 ntBASIC-0.04□□□□□ -2.42
Trafd1Q3UDK1 Gm23678-201ENSMUST00000083157 107 ntBASIC-0.04□□□□□ -2.42
Trafd1Q3UDK1 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.05□□□□□ -2.42
Trafd1Q3UDK1 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.05□□□□□ -2.42
Trafd1Q3UDK1 Gm23350-201ENSMUST00000158429 103 ntBASIC-0.05□□□□□ -2.42
Trafd1Q3UDK1 Gm23966-201ENSMUST00000179823 107 ntBASIC-0.05□□□□□ -2.42
Trafd1Q3UDK1 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
Trafd1Q3UDK1 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.06□□□□□ -2.42
Trafd1Q3UDK1 Mir141-201ENSMUST00000083540 72 ntBASIC-0.06□□□□□ -2.42
Trafd1Q3UDK1 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.07□□□□□ -2.42
Trafd1Q3UDK1 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.07□□□□□ -2.42
Trafd1Q3UDK1 Mir191-201ENSMUST00000196210 74 ntBASIC-0.08□□□□□ -2.42
Trafd1Q3UDK1 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.08□□□□□ -2.42
Trafd1Q3UDK1 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.08□□□□□ -2.42
Trafd1Q3UDK1 mt-Tn-201ENSMUST00000082399 71 ntBASIC-0.08□□□□□ -2.42
Trafd1Q3UDK1 Gm24202-201ENSMUST00000082948 103 ntBASIC-0.08□□□□□ -2.42
Trafd1Q3UDK1 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.09□□□□□ -2.42
Trafd1Q3UDK1 Gm22406-201ENSMUST00000174923 93 ntBASIC-0.09□□□□□ -2.42
Trafd1Q3UDK1 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.09□□□□□ -2.42
Trafd1Q3UDK1 Mir7-1-201ENSMUST00000083500 108 ntBASIC-0.09□□□□□ -2.42
Trafd1Q3UDK1 Mir369-201ENSMUST00000083627 79 ntBASIC-0.09□□□□□ -2.42
Trafd1Q3UDK1 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.09□□□□□ -2.42
Trafd1Q3UDK1 Gm25337-201ENSMUST00000083723 104 ntBASIC-0.09□□□□□ -2.42
Trafd1Q3UDK1 Gm24697-201ENSMUST00000083881 107 ntBASIC-0.09□□□□□ -2.42
Trafd1Q3UDK1 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.1□□□□□ -2.43
Trafd1Q3UDK1 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.1□□□□□ -2.43
Trafd1Q3UDK1 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.1□□□□□ -2.43
Trafd1Q3UDK1 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.1□□□□□ -2.43
Trafd1Q3UDK1 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.1□□□□□ -2.43
Trafd1Q3UDK1 Gm22055-201ENSMUST00000083388 107 ntBASIC-0.1□□□□□ -2.43
Trafd1Q3UDK1 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.11□□□□□ -2.43
Trafd1Q3UDK1 Gm25656-201ENSMUST00000158466 66 ntBASIC-0.11□□□□□ -2.43
Trafd1Q3UDK1 Mir672-201ENSMUST00000102331 100 ntBASIC-0.12□□□□□ -2.43
Trafd1Q3UDK1 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.12□□□□□ -2.43
Trafd1Q3UDK1 Gm24926-201ENSMUST00000178053 79 ntBASIC-0.12□□□□□ -2.43
Trafd1Q3UDK1 Gm22632-201ENSMUST00000178266 79 ntBASIC-0.12□□□□□ -2.43
Trafd1Q3UDK1 Gm25646-201ENSMUST00000178527 79 ntBASIC-0.12□□□□□ -2.43
Trafd1Q3UDK1 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.13□□□□□ -2.43
Trafd1Q3UDK1 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.13□□□□□ -2.43
Trafd1Q3UDK1 Snord67-201ENSMUST00000104033 111 ntBASIC-0.14□□□□□ -2.43
Trafd1Q3UDK1 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.14□□□□□ -2.43
Trafd1Q3UDK1 Gm22070-201ENSMUST00000178475 107 ntBASIC-0.14□□□□□ -2.43
Trafd1Q3UDK1 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.14□□□□□ -2.43
Trafd1Q3UDK1 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-0.14□□□□□ -2.43
Trafd1Q3UDK1 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.14□□□□□ -2.43
Trafd1Q3UDK1 Gm25920-201ENSMUST00000158307 99 ntBASIC-0.15□□□□□ -2.43
Trafd1Q3UDK1 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.15□□□□□ -2.43
Trafd1Q3UDK1 Mir327-201ENSMUST00000199328 69 ntBASIC-0.15□□□□□ -2.43
Trafd1Q3UDK1 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.15□□□□□ -2.43
Trafd1Q3UDK1 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.15□□□□□ -2.43
Trafd1Q3UDK1 Gm26109-201ENSMUST00000083970 70 ntBASIC-0.15□□□□□ -2.43
Trafd1Q3UDK1 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.16□□□□□ -2.44
Trafd1Q3UDK1 Gm24167-201ENSMUST00000177733 124 ntBASIC-0.16□□□□□ -2.44
Trafd1Q3UDK1 Gm24028-201ENSMUST00000178991 124 ntBASIC-0.16□□□□□ -2.44
Trafd1Q3UDK1 Gm42844-201ENSMUST00000200355 112 ntBASIC-0.16□□□□□ -2.44
Trafd1Q3UDK1 AC140930.2-201ENSMUST00000221803 109 ntBASIC-0.16□□□□□ -2.44
Trafd1Q3UDK1 Mir466-201ENSMUST00000093591 73 ntBASIC-0.16□□□□□ -2.44
Trafd1Q3UDK1 Mir669h-201ENSMUST00000116944 125 ntBASIC-0.17□□□□□ -2.44
Trafd1Q3UDK1 Gm22490-201ENSMUST00000157188 119 ntBASIC-0.17□□□□□ -2.44
Trafd1Q3UDK1 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.17□□□□□ -2.44
Trafd1Q3UDK1 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.17□□□□□ -2.44
Trafd1Q3UDK1 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.17□□□□□ -2.44
Trafd1Q3UDK1 AC166341.8-201ENSMUST00000221267 108 ntBASIC-0.17□□□□□ -2.44
Trafd1Q3UDK1 Gm14533-201ENSMUST00000117088 93 ntBASIC-0.18□□□□□ -2.44
Trafd1Q3UDK1 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.18□□□□□ -2.44
Trafd1Q3UDK1 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.19□□□□□ -2.44
Trafd1Q3UDK1 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.2□□□□□ -2.44
Trafd1Q3UDK1 Gm25753-201ENSMUST00000116792 121 ntBASIC-0.2□□□□□ -2.44
Trafd1Q3UDK1 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.2□□□□□ -2.44
Trafd1Q3UDK1 AC132833.2-201ENSMUST00000228699 157 ntBASIC-0.2□□□□□ -2.44
Trafd1Q3UDK1 mt-Tw-201ENSMUST00000082397 67 ntBASIC-0.2□□□□□ -2.44
Trafd1Q3UDK1 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.2□□□□□ -2.44
Trafd1Q3UDK1 Gm23138-201ENSMUST00000083365 103 ntBASIC-0.2□□□□□ -2.44
Trafd1Q3UDK1 Mir214-201ENSMUST00000083582 110 ntBASIC-0.2□□□□□ -2.44
Trafd1Q3UDK1 Gm24580-201ENSMUST00000103965 131 ntBASIC-0.21□□□□□ -2.44
Trafd1Q3UDK1 Gm25678-201ENSMUST00000174984 73 ntBASIC-0.21□□□□□ -2.44
Trafd1Q3UDK1 mt-Tv-201ENSMUST00000082389 69 ntBASIC-0.21□□□□□ -2.44
Trafd1Q3UDK1 Gm25684-201ENSMUST00000083941 107 ntBASIC-0.21□□□□□ -2.44
Trafd1Q3UDK1 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm25098-201ENSMUST00000177580 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm23356-201ENSMUST00000177610 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm24027-201ENSMUST00000177611 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm22511-201ENSMUST00000177628 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm22630-201ENSMUST00000177781 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm23560-201ENSMUST00000177782 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm25462-201ENSMUST00000177833 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm26059-201ENSMUST00000177865 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm22255-201ENSMUST00000177933 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm25146-201ENSMUST00000177976 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm25523-201ENSMUST00000178044 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm24585-201ENSMUST00000178104 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm22627-201ENSMUST00000178127 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm22912-201ENSMUST00000178242 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm24866-201ENSMUST00000178338 79 ntBASIC-0.22□□□□□ -2.44
Trafd1Q3UDK1 Gm22524-201ENSMUST00000178357 79 ntBASIC-0.22□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 166.1 ms