Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm22203-201ENSMUST00000158605 58 ntBASIC1.18□□□□□ -2.22
Usp39Q3TIX9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.18□□□□□ -2.22
Usp39Q3TIX9 Gm23636-201ENSMUST00000175070 95 ntBASIC1.18□□□□□ -2.22
Usp39Q3TIX9 Gm43907-201ENSMUST00000203128 117 ntBASIC1.18□□□□□ -2.22
Usp39Q3TIX9 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.18□□□□□ -2.22
Usp39Q3TIX9 Gm24983-201ENSMUST00000104457 69 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 Mir1197-201ENSMUST00000117037 120 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 Gm25968-201ENSMUST00000157167 100 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 Gm22485-201ENSMUST00000157990 109 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 Gm23340-201ENSMUST00000158955 123 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 Gm22413-201ENSMUST00000175465 85 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 Snora75-201ENSMUST00000082903 133 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.17□□□□□ -2.22
Usp39Q3TIX9 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Usp39Q3TIX9 Gm25756-201ENSMUST00000103990 136 ntBASIC1.16□□□□□ -2.22
Usp39Q3TIX9 Gm25609-201ENSMUST00000104019 104 ntBASIC1.16□□□□□ -2.22
Usp39Q3TIX9 Gm26485-201ENSMUST00000158019 64 ntBASIC1.16□□□□□ -2.22
Usp39Q3TIX9 Gm25768-201ENSMUST00000158570 98 ntBASIC1.16□□□□□ -2.22
Usp39Q3TIX9 Mir7063-201ENSMUST00000184158 91 ntBASIC1.16□□□□□ -2.22
Usp39Q3TIX9 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.16□□□□□ -2.22
Usp39Q3TIX9 Mir324-201ENSMUST00000083600 89 ntBASIC1.16□□□□□ -2.22
Usp39Q3TIX9 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Usp39Q3TIX9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.16□□□□□ -2.22
Usp39Q3TIX9 Gm23991-201ENSMUST00000117033 93 ntBASIC1.15□□□□□ -2.23
Usp39Q3TIX9 Gm24221-201ENSMUST00000158833 313 ntBASIC1.15□□□□□ -2.23
Usp39Q3TIX9 Gm25366-201ENSMUST00000158845 124 ntBASIC1.15□□□□□ -2.23
Usp39Q3TIX9 Traj60-201ENSMUST00000167781 54 ntBASIC1.15□□□□□ -2.23
Usp39Q3TIX9 Gm27420-201ENSMUST00000183823 79 ntBASIC1.15□□□□□ -2.23
Usp39Q3TIX9 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Gm6985-201ENSMUST00000121255 271 ntBASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Gm43944-201ENSMUST00000205220 120 ntBASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Gm26224-201ENSMUST00000082506 80 ntBASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Gm22980-201ENSMUST00000082608 70 ntBASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Gm24918-201ENSMUST00000083022 130 ntBASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Mir377-201ENSMUST00000083504 68 ntBASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Mir126a-201ENSMUST00000083606 73 ntBASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Mir500-201ENSMUST00000093600 92 ntBASIC1.14□□□□□ -2.23
Usp39Q3TIX9 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Usp39Q3TIX9 Gm25991-201ENSMUST00000102439 99 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Gm24342-201ENSMUST00000103907 104 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Gm11966-201ENSMUST00000119907 87 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Gm26274-201ENSMUST00000157103 321 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Gm22541-201ENSMUST00000158165 127 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Gm24073-201ENSMUST00000158177 106 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Gm22466-201ENSMUST00000175278 69 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Gm23726-201ENSMUST00000178937 67 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Gm23301-201ENSMUST00000082713 65 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Mir344-201ENSMUST00000083634 95 ntBASIC1.13□□□□□ -2.23
Usp39Q3TIX9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Usp39Q3TIX9 Gm22048-201ENSMUST00000104721 89 ntBASIC1.12□□□□□ -2.23
Usp39Q3TIX9 Gm24500-201ENSMUST00000158447 124 ntBASIC1.12□□□□□ -2.23
Usp39Q3TIX9 Gm22565-201ENSMUST00000175540 69 ntBASIC1.12□□□□□ -2.23
Usp39Q3TIX9 Gm24549-201ENSMUST00000158647 139 ntBASIC1.11□□□□□ -2.23
Usp39Q3TIX9 Gm26363-201ENSMUST00000158866 83 ntBASIC1.11□□□□□ -2.23
Usp39Q3TIX9 Gm22406-201ENSMUST00000174923 93 ntBASIC1.11□□□□□ -2.23
Usp39Q3TIX9 Mir6985-201ENSMUST00000184641 61 ntBASIC1.11□□□□□ -2.23
Usp39Q3TIX9 Gm38323-201ENSMUST00000192450 210 ntBASIC1.11□□□□□ -2.23
Usp39Q3TIX9 Gm6293-201ENSMUST00000050339 195 ntBASIC1.11□□□□□ -2.23
Usp39Q3TIX9 Gm24134-201ENSMUST00000083361 71 ntBASIC1.11□□□□□ -2.23
Usp39Q3TIX9 Mir196b-201ENSMUST00000083509 85 ntBASIC1.11□□□□□ -2.23
Usp39Q3TIX9 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Gm25040-201ENSMUST00000103877 66 ntBASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Snord2-201ENSMUST00000157899 69 ntBASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Gm24808-201ENSMUST00000157993 118 ntBASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Mir3064-201ENSMUST00000175532 67 ntBASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Gm16399-201ENSMUST00000181423 219 ntBASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Mir6342-201ENSMUST00000183870 125 ntBASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Mir7091-201ENSMUST00000184075 79 ntBASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Gm42506-201ENSMUST00000202009 150 ntBASIC1.1□□□□□ -2.23
Usp39Q3TIX9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
Usp39Q3TIX9 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.09□□□□□ -2.23
Usp39Q3TIX9 Mir30a-201ENSMUST00000083471 71 ntBASIC1.09□□□□□ -2.23
Usp39Q3TIX9 Gm25496-201ENSMUST00000104430 120 ntBASIC1.08□□□□□ -2.24
Usp39Q3TIX9 Gm24378-201ENSMUST00000122699 106 ntBASIC1.08□□□□□ -2.24
Usp39Q3TIX9 Mir100-201ENSMUST00000175270 80 ntBASIC1.08□□□□□ -2.24
Usp39Q3TIX9 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
Usp39Q3TIX9 Gm27549-201ENSMUST00000183508 62 ntBASIC1.08□□□□□ -2.24
Usp39Q3TIX9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.08□□□□□ -2.24
Usp39Q3TIX9 Gm25416-201ENSMUST00000104221 107 ntBASIC1.07□□□□□ -2.24
Usp39Q3TIX9 Gm6272-201ENSMUST00000121256 171 ntBASIC1.07□□□□□ -2.24
Usp39Q3TIX9 Gm22074-201ENSMUST00000158595 113 ntBASIC1.07□□□□□ -2.24
Usp39Q3TIX9 Gm23477-201ENSMUST00000158882 128 ntBASIC1.07□□□□□ -2.24
Usp39Q3TIX9 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.07□□□□□ -2.24
Usp39Q3TIX9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.07□□□□□ -2.24
Usp39Q3TIX9 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.07□□□□□ -2.24
Usp39Q3TIX9 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Usp39Q3TIX9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
Usp39Q3TIX9 Gm24580-201ENSMUST00000103965 131 ntBASIC1.06□□□□□ -2.24
Usp39Q3TIX9 Gm22100-201ENSMUST00000157926 63 ntBASIC1.06□□□□□ -2.24
Usp39Q3TIX9 Gm25328-201ENSMUST00000175013 107 ntBASIC1.06□□□□□ -2.24
Usp39Q3TIX9 Gm44458-201ENSMUST00000196594 143 ntBASIC1.06□□□□□ -2.24
Usp39Q3TIX9 Gm24311-201ENSMUST00000082570 104 ntBASIC1.06□□□□□ -2.24
Usp39Q3TIX9 Gm24271-201ENSMUST00000102327 111 ntBASIC1.05□□□□□ -2.24
Usp39Q3TIX9 Mir741-201ENSMUST00000103931 71 ntBASIC1.05□□□□□ -2.24
Usp39Q3TIX9 Mir1904-201ENSMUST00000122702 80 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 208.9 ms