Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm25381-201ENSMUST00000102078 109 ntBASIC2.16□□□□□ -2.06
Col9a1Q05722 Gm22786-201ENSMUST00000104086 122 ntBASIC2.16□□□□□ -2.06
Col9a1Q05722 Gm22340-201ENSMUST00000157717 114 ntBASIC2.16□□□□□ -2.06
Col9a1Q05722 Gm22663-201ENSMUST00000158721 102 ntBASIC2.16□□□□□ -2.06
Col9a1Q05722 Gm19257-201ENSMUST00000186121 183 ntBASIC2.16□□□□□ -2.06
Col9a1Q05722 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.15□□□□□ -2.07
Col9a1Q05722 Gm26274-201ENSMUST00000157103 321 ntBASIC2.15□□□□□ -2.07
Col9a1Q05722 Mir7679-201ENSMUST00000183379 63 ntBASIC2.15□□□□□ -2.07
Col9a1Q05722 CT030170.1-201ENSMUST00000222183 148 ntBASIC2.15□□□□□ -2.07
Col9a1Q05722 Gm24494-201ENSMUST00000083804 81 ntBASIC2.15□□□□□ -2.07
Col9a1Q05722 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col9a1Q05722 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Col9a1Q05722 Gm22593-201ENSMUST00000104245 109 ntBASIC2.14□□□□□ -2.07
Col9a1Q05722 Gm24902-201ENSMUST00000158126 123 ntBASIC2.14□□□□□ -2.07
Col9a1Q05722 AC211878.4-201ENSMUST00000220970 262 ntBASIC2.14□□□□□ -2.07
Col9a1Q05722 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col9a1Q05722 Gm22717-201ENSMUST00000122703 171 ntBASIC2.13□□□□□ -2.07
Col9a1Q05722 Gm22466-201ENSMUST00000175278 69 ntBASIC2.13□□□□□ -2.07
Col9a1Q05722 Gm29344-201ENSMUST00000068143 210 ntBASIC2.13□□□□□ -2.07
Col9a1Q05722 Gm26375-201ENSMUST00000101829 106 ntBASIC2.12□□□□□ -2.07
Col9a1Q05722 Gm22486-201ENSMUST00000116815 137 ntBASIC2.12□□□□□ -2.07
Col9a1Q05722 Gm22087-201ENSMUST00000158339 88 ntBASIC2.12□□□□□ -2.07
Col9a1Q05722 Gm23339-201ENSMUST00000158962 139 ntBASIC2.12□□□□□ -2.07
Col9a1Q05722 Mir376b-201ENSMUST00000195930 82 ntBASIC2.12□□□□□ -2.07
Col9a1Q05722 Snord104-201ENSMUST00000083192 70 ntBASIC2.12□□□□□ -2.07
Col9a1Q05722 Gm24612-201ENSMUST00000083267 107 ntBASIC2.12□□□□□ -2.07
Col9a1Q05722 Gm25040-201ENSMUST00000103877 66 ntBASIC2.11□□□□□ -2.07
Col9a1Q05722 Gm23783-201ENSMUST00000157941 102 ntBASIC2.11□□□□□ -2.07
Col9a1Q05722 Mir1954-201ENSMUST00000175595 86 ntBASIC2.11□□□□□ -2.07
Col9a1Q05722 Gm23329-201ENSMUST00000157415 108 ntBASIC2.1□□□□□ -2.07
Col9a1Q05722 Gm22785-201ENSMUST00000104087 132 ntBASIC2.09□□□□□ -2.07
Col9a1Q05722 Mir3098-201ENSMUST00000175416 87 ntBASIC2.09□□□□□ -2.07
Col9a1Q05722 Mir377-201ENSMUST00000083504 68 ntBASIC2.09□□□□□ -2.07
Col9a1Q05722 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Col9a1Q05722 Gm22083-201ENSMUST00000157586 102 ntBASIC2.08□□□□□ -2.08
Col9a1Q05722 Gm22164-201ENSMUST00000158413 106 ntBASIC2.08□□□□□ -2.08
Col9a1Q05722 Gm25831-201ENSMUST00000158924 163 ntBASIC2.08□□□□□ -2.08
Col9a1Q05722 Gm27443-201ENSMUST00000184660 98 ntBASIC2.08□□□□□ -2.08
Col9a1Q05722 Mir30a-201ENSMUST00000083471 71 ntBASIC2.08□□□□□ -2.08
Col9a1Q05722 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Col9a1Q05722 Mir344d-3-201ENSMUST00000175458 80 ntBASIC2.07□□□□□ -2.08
Col9a1Q05722 Gm42677-201ENSMUST00000196363 127 ntBASIC2.07□□□□□ -2.08
Col9a1Q05722 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.07□□□□□ -2.08
Col9a1Q05722 Snord69-201ENSMUST00000104024 80 ntBASIC2.06□□□□□ -2.08
Col9a1Q05722 Gm24377-201ENSMUST00000104398 131 ntBASIC2.06□□□□□ -2.08
Col9a1Q05722 Mir669h-201ENSMUST00000116944 125 ntBASIC2.06□□□□□ -2.08
Col9a1Q05722 Gm24549-201ENSMUST00000158647 139 ntBASIC2.06□□□□□ -2.08
Col9a1Q05722 Gm22652-201ENSMUST00000083207 131 ntBASIC2.06□□□□□ -2.08
Col9a1Q05722 Gm23483-201ENSMUST00000104179 108 ntBASIC2.05□□□□□ -2.08
Col9a1Q05722 Gm23328-201ENSMUST00000157418 132 ntBASIC2.05□□□□□ -2.08
Col9a1Q05722 Gm24475-201ENSMUST00000157435 143 ntBASIC2.05□□□□□ -2.08
Col9a1Q05722 Gm22459-201ENSMUST00000082577 108 ntBASIC2.05□□□□□ -2.08
Col9a1Q05722 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Col9a1Q05722 Gm22761-201ENSMUST00000102278 96 ntBASIC2.04□□□□□ -2.08
Col9a1Q05722 Gm25440-201ENSMUST00000158279 154 ntBASIC2.04□□□□□ -2.08
Col9a1Q05722 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.04□□□□□ -2.08
Col9a1Q05722 Mir7673-201ENSMUST00000184567 64 ntBASIC2.04□□□□□ -2.08
Col9a1Q05722 Gm44396-201ENSMUST00000199843 114 ntBASIC2.04□□□□□ -2.08
Col9a1Q05722 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.04□□□□□ -2.08
Col9a1Q05722 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col9a1Q05722 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col9a1Q05722 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col9a1Q05722 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Col9a1Q05722 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Col9a1Q05722 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.03□□□□□ -2.08
Col9a1Q05722 Gm27717-201ENSMUST00000183933 151 ntBASIC2.03□□□□□ -2.08
Col9a1Q05722 n-R5s12-201ENSMUST00000083785 119 ntBASIC2.03□□□□□ -2.08
Col9a1Q05722 Gm23012-201ENSMUST00000104149 83 ntBASIC2.02□□□□□ -2.09
Col9a1Q05722 Gm23590-201ENSMUST00000157661 104 ntBASIC2.02□□□□□ -2.09
Col9a1Q05722 Gm24996-201ENSMUST00000158390 99 ntBASIC2.02□□□□□ -2.09
Col9a1Q05722 Mir100-201ENSMUST00000175270 80 ntBASIC2.02□□□□□ -2.09
Col9a1Q05722 Gm26491-201ENSMUST00000179268 121 ntBASIC2.02□□□□□ -2.09
Col9a1Q05722 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Col9a1Q05722 Gm22093-201ENSMUST00000158980 111 ntBASIC2.01□□□□□ -2.09
Col9a1Q05722 Gm27265-201ENSMUST00000183559 77 ntBASIC2.01□□□□□ -2.09
Col9a1Q05722 Snord95-201ENSMUST00000082846 68 ntBASIC2.01□□□□□ -2.09
Col9a1Q05722 Gm22127-201ENSMUST00000083239 106 ntBASIC2.01□□□□□ -2.09
Col9a1Q05722 Gm23130-201ENSMUST00000104252 74 ntBASIC2□□□□□ -2.09
Col9a1Q05722 Gm13065-201ENSMUST00000119178 141 ntBASIC2□□□□□ -2.09
Col9a1Q05722 Scarna3b-201ENSMUST00000157533 139 ntBASIC2□□□□□ -2.09
Col9a1Q05722 Gm25522-201ENSMUST00000158394 105 ntBASIC2□□□□□ -2.09
Col9a1Q05722 Scarna3a-201ENSMUST00000158911 140 ntBASIC2□□□□□ -2.09
Col9a1Q05722 Mir6342-201ENSMUST00000183870 125 ntBASIC2□□□□□ -2.09
Col9a1Q05722 Mir1949-202ENSMUST00000199259 70 ntBASIC2□□□□□ -2.09
Col9a1Q05722 Gm26154-201ENSMUST00000102339 96 ntBASIC1.99□□□□□ -2.09
Col9a1Q05722 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC1.99□□□□□ -2.09
Col9a1Q05722 Gm23033-201ENSMUST00000157996 134 ntBASIC1.99□□□□□ -2.09
Col9a1Q05722 Gm27420-201ENSMUST00000183823 79 ntBASIC1.99□□□□□ -2.09
Col9a1Q05722 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Col9a1Q05722 Gm25222-201ENSMUST00000158199 126 ntBASIC1.98□□□□□ -2.09
Col9a1Q05722 Gm24984-201ENSMUST00000104454 133 ntBASIC1.97□□□□□ -2.09
Col9a1Q05722 Gm25010-201ENSMUST00000158403 65 ntBASIC1.97□□□□□ -2.09
Col9a1Q05722 Mir7232-201ENSMUST00000197929 74 ntBASIC1.97□□□□□ -2.09
Col9a1Q05722 Gm22386-201ENSMUST00000158192 129 ntBASIC1.96□□□□□ -2.1
Col9a1Q05722 Gm25656-201ENSMUST00000158466 66 ntBASIC1.96□□□□□ -2.1
Col9a1Q05722 Gm24710-201ENSMUST00000175235 101 ntBASIC1.96□□□□□ -2.1
Col9a1Q05722 Gm24797-201ENSMUST00000178103 107 ntBASIC1.96□□□□□ -2.1
Col9a1Q05722 Gm24135-201ENSMUST00000179085 101 ntBASIC1.96□□□□□ -2.1
Col9a1Q05722 Mir7678-201ENSMUST00000185076 71 ntBASIC1.96□□□□□ -2.1
Col9a1Q05722 Gm26438-201ENSMUST00000082593 107 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 248.7 ms