Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm22640-201ENSMUST00000179035 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm25984-201ENSMUST00000179129 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm25585-201ENSMUST00000179469 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm26374-201ENSMUST00000179737 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm24040-201ENSMUST00000179786 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm25017-201ENSMUST00000179805 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm23618-201ENSMUST00000179912 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm26284-201ENSMUST00000180107 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm24570-201ENSMUST00000180314 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm24654-201ENSMUST00000180315 79 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm22509-201ENSMUST00000082775 107 ntBASIC0.37□□□□□ -2.35
Ercc3P49135 Gm25889-201ENSMUST00000157775 107 ntBASIC0.36□□□□□ -2.35
Ercc3P49135 Gm23291-201ENSMUST00000175611 78 ntBASIC0.36□□□□□ -2.35
Ercc3P49135 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.35□□□□□ -2.35
Ercc3P49135 Gm27607-201ENSMUST00000185162 122 ntBASIC0.35□□□□□ -2.35
Ercc3P49135 Gm37796-201ENSMUST00000195327 134 ntBASIC0.35□□□□□ -2.35
Ercc3P49135 Gm44327-201ENSMUST00000200068 117 ntBASIC0.35□□□□□ -2.35
Ercc3P49135 Mir710-201ENSMUST00000102088 110 ntBASIC0.34□□□□□ -2.36
Ercc3P49135 Gm24833-201ENSMUST00000116775 120 ntBASIC0.34□□□□□ -2.36
Ercc3P49135 Gm23180-201ENSMUST00000158686 125 ntBASIC0.34□□□□□ -2.36
Ercc3P49135 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.34□□□□□ -2.36
Ercc3P49135 Gm26712-201ENSMUST00000180813 217 ntBASIC0.34□□□□□ -2.36
Ercc3P49135 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.34□□□□□ -2.36
Ercc3P49135 Gm26421-201ENSMUST00000104279 132 ntBASIC0.33□□□□□ -2.36
Ercc3P49135 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.33□□□□□ -2.36
Ercc3P49135 Gm26152-201ENSMUST00000157427 101 ntBASIC0.33□□□□□ -2.36
Ercc3P49135 Gm22088-201ENSMUST00000158341 117 ntBASIC0.33□□□□□ -2.36
Ercc3P49135 Gm25337-201ENSMUST00000083723 104 ntBASIC0.33□□□□□ -2.36
Ercc3P49135 Gm23994-201ENSMUST00000158059 88 ntBASIC0.32□□□□□ -2.36
Ercc3P49135 Scarna8-201ENSMUST00000158333 131 ntBASIC0.32□□□□□ -2.36
Ercc3P49135 mt-Tf-201ENSMUST00000082387 68 ntBASIC0.32□□□□□ -2.36
Ercc3P49135 Gm26054-201ENSMUST00000083037 107 ntBASIC0.32□□□□□ -2.36
Ercc3P49135 Mir29a-201ENSMUST00000083676 88 ntBASIC0.32□□□□□ -2.36
Ercc3P49135 Gm24492-201ENSMUST00000083798 107 ntBASIC0.32□□□□□ -2.36
Ercc3P49135 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.32□□□□□ -2.36
Ercc3P49135 Mir669f-201ENSMUST00000103850 121 ntBASIC0.31□□□□□ -2.36
Ercc3P49135 Gm23012-201ENSMUST00000104149 83 ntBASIC0.31□□□□□ -2.36
Ercc3P49135 Gm23531-201ENSMUST00000104567 68 ntBASIC0.31□□□□□ -2.36
Ercc3P49135 Snord2-201ENSMUST00000157899 69 ntBASIC0.31□□□□□ -2.36
Ercc3P49135 Gm25366-201ENSMUST00000158845 124 ntBASIC0.31□□□□□ -2.36
Ercc3P49135 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.31□□□□□ -2.36
Ercc3P49135 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.3□□□□□ -2.36
Ercc3P49135 Mir6237-201ENSMUST00000183808 91 ntBASIC0.3□□□□□ -2.36
Ercc3P49135 Mir509-201ENSMUST00000196089 75 ntBASIC0.3□□□□□ -2.36
Ercc3P49135 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.29□□□□□ -2.36
Ercc3P49135 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.29□□□□□ -2.36
Ercc3P49135 AC140930.2-201ENSMUST00000221803 109 ntBASIC0.29□□□□□ -2.36
Ercc3P49135 Gm26109-201ENSMUST00000083970 70 ntBASIC0.29□□□□□ -2.36
Ercc3P49135 Gm26478-201ENSMUST00000122611 133 ntBASIC0.28□□□□□ -2.36
Ercc3P49135 Gm42845-201ENSMUST00000197766 105 ntBASIC0.28□□□□□ -2.36
Ercc3P49135 Gm23278-201ENSMUST00000157911 143 ntBASIC0.27□□□□□ -2.37
Ercc3P49135 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.27□□□□□ -2.37
Ercc3P49135 Gm44345-201ENSMUST00000199560 135 ntBASIC0.26□□□□□ -2.37
Ercc3P49135 Mir3108-201ENSMUST00000175500 79 ntBASIC0.25□□□□□ -2.37
Ercc3P49135 Mir6365-201ENSMUST00000183990 101 ntBASIC0.25□□□□□ -2.37
Ercc3P49135 Gm24467-201ENSMUST00000157887 126 ntBASIC0.24□□□□□ -2.37
Ercc3P49135 Gm22100-201ENSMUST00000157926 63 ntBASIC0.24□□□□□ -2.37
Ercc3P49135 Gm44803-201ENSMUST00000204384 156 ntBASIC0.24□□□□□ -2.37
Ercc3P49135 AC166341.8-201ENSMUST00000221267 108 ntBASIC0.24□□□□□ -2.37
Ercc3P49135 Gm24202-201ENSMUST00000082948 103 ntBASIC0.24□□□□□ -2.37
Ercc3P49135 Gm22828-201ENSMUST00000083768 107 ntBASIC0.24□□□□□ -2.37
Ercc3P49135 Gm25497-201ENSMUST00000104425 132 ntBASIC0.23□□□□□ -2.37
Ercc3P49135 Gm28001-201ENSMUST00000183561 117 ntBASIC0.23□□□□□ -2.37
Ercc3P49135 Gm24148-201ENSMUST00000082762 80 ntBASIC0.23□□□□□ -2.37
Ercc3P49135 Mir18-201ENSMUST00000083469 96 ntBASIC0.23□□□□□ -2.37
Ercc3P49135 Gm24983-201ENSMUST00000104457 69 ntBASIC0.22□□□□□ -2.37
Ercc3P49135 AC132833.2-201ENSMUST00000228699 157 ntBASIC0.22□□□□□ -2.37
Ercc3P49135 Gm22981-201ENSMUST00000082611 75 ntBASIC0.22□□□□□ -2.37
Ercc3P49135 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.22□□□□□ -2.37
Ercc3P49135 Gm23821-201ENSMUST00000158738 106 ntBASIC0.21□□□□□ -2.38
Ercc3P49135 Gm24801-201ENSMUST00000178503 105 ntBASIC0.21□□□□□ -2.38
Ercc3P49135 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
Ercc3P49135 Gm24697-201ENSMUST00000083881 107 ntBASIC0.21□□□□□ -2.38
Ercc3P49135 Gm25756-201ENSMUST00000103990 136 ntBASIC0.2□□□□□ -2.38
Ercc3P49135 Gm24884-201ENSMUST00000158784 119 ntBASIC0.2□□□□□ -2.38
Ercc3P49135 Snord95-201ENSMUST00000082846 68 ntBASIC0.2□□□□□ -2.38
Ercc3P49135 Mir382-201ENSMUST00000083494 76 ntBASIC0.2□□□□□ -2.38
Ercc3P49135 Gm22203-201ENSMUST00000158605 58 ntBASIC0.19□□□□□ -2.38
Ercc3P49135 Gm26007-201ENSMUST00000158798 120 ntBASIC0.19□□□□□ -2.38
Ercc3P49135 Gm22048-201ENSMUST00000104721 89 ntBASIC0.18□□□□□ -2.38
Ercc3P49135 Gm25885-201ENSMUST00000157779 109 ntBASIC0.18□□□□□ -2.38
Ercc3P49135 Gm25160-201ENSMUST00000158914 102 ntBASIC0.18□□□□□ -2.38
Ercc3P49135 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC0.18□□□□□ -2.38
Ercc3P49135 Gm22004-201ENSMUST00000101884 107 ntBASIC0.17□□□□□ -2.38
Ercc3P49135 Gm23020-201ENSMUST00000158766 253 ntBASIC0.17□□□□□ -2.38
Ercc3P49135 Gm29047-201ENSMUST00000189816 108 ntBASIC0.17□□□□□ -2.38
Ercc3P49135 Gm24234-201ENSMUST00000104316 107 ntBASIC0.16□□□□□ -2.38
Ercc3P49135 Gm22672-201ENSMUST00000104414 134 ntBASIC0.16□□□□□ -2.38
Ercc3P49135 Gm22406-201ENSMUST00000174923 93 ntBASIC0.16□□□□□ -2.38
Ercc3P49135 Mir8107-201ENSMUST00000184024 117 ntBASIC0.16□□□□□ -2.38
Ercc3P49135 Gm26438-201ENSMUST00000082593 107 ntBASIC0.16□□□□□ -2.38
Ercc3P49135 Gm24586-201ENSMUST00000116695 89 ntBASIC0.15□□□□□ -2.39
Ercc3P49135 Gm25055-201ENSMUST00000157369 76 ntBASIC0.15□□□□□ -2.39
Ercc3P49135 Gm23761-201ENSMUST00000158347 104 ntBASIC0.15□□□□□ -2.39
Ercc3P49135 Gm24877-201ENSMUST00000158779 116 ntBASIC0.15□□□□□ -2.39
Ercc3P49135 Gm25952-201ENSMUST00000175329 74 ntBASIC0.15□□□□□ -2.39
Ercc3P49135 Mir3065-201ENSMUST00000198674 87 ntBASIC0.15□□□□□ -2.39
Ercc3P49135 Gm26456-201ENSMUST00000082831 111 ntBASIC0.15□□□□□ -2.39
Ercc3P49135 Gm25656-201ENSMUST00000158466 66 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 189.7 ms