Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm23708-201ENSMUST00000104367 123 ntBASIC1.22□□□□□ -2.21
Rfx1P48377 Gm44458-201ENSMUST00000196594 143 ntBASIC1.22□□□□□ -2.21
Rfx1P48377 Gm23528-201ENSMUST00000104571 132 ntBASIC1.21□□□□□ -2.22
Rfx1P48377 Gm22205-201ENSMUST00000122655 71 ntBASIC1.21□□□□□ -2.22
Rfx1P48377 Gm24777-201ENSMUST00000157644 107 ntBASIC1.21□□□□□ -2.22
Rfx1P48377 Gm25715-201ENSMUST00000158627 125 ntBASIC1.21□□□□□ -2.22
Rfx1P48377 Gm26029-201ENSMUST00000158659 132 ntBASIC1.21□□□□□ -2.22
Rfx1P48377 Mir7663-201ENSMUST00000183950 61 ntBASIC1.21□□□□□ -2.22
Rfx1P48377 Mir200b-201ENSMUST00000083615 70 ntBASIC1.21□□□□□ -2.22
Rfx1P48377 Gm24252-201ENSMUST00000083700 132 ntBASIC1.21□□□□□ -2.22
Rfx1P48377 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Rfx1P48377 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Rfx1P48377 Snord71-201ENSMUST00000104361 85 ntBASIC1.2□□□□□ -2.22
Rfx1P48377 Gm24384-201ENSMUST00000122693 75 ntBASIC1.2□□□□□ -2.22
Rfx1P48377 Gm23893-201ENSMUST00000158106 134 ntBASIC1.2□□□□□ -2.22
Rfx1P48377 Gm43206-201ENSMUST00000197990 114 ntBASIC1.2□□□□□ -2.22
Rfx1P48377 Gm22732-201ENSMUST00000158093 121 ntBASIC1.19□□□□□ -2.22
Rfx1P48377 Gm22100-201ENSMUST00000157926 63 ntBASIC1.18□□□□□ -2.22
Rfx1P48377 Gm22605-201ENSMUST00000158289 108 ntBASIC1.18□□□□□ -2.22
Rfx1P48377 Gm24942-201ENSMUST00000158328 114 ntBASIC1.18□□□□□ -2.22
Rfx1P48377 Gm24637-201ENSMUST00000158674 85 ntBASIC1.18□□□□□ -2.22
Rfx1P48377 Gm25633-201ENSMUST00000178565 107 ntBASIC1.18□□□□□ -2.22
Rfx1P48377 Mir7091-201ENSMUST00000184075 79 ntBASIC1.18□□□□□ -2.22
Rfx1P48377 Gm22805-201ENSMUST00000082739 107 ntBASIC1.18□□□□□ -2.22
Rfx1P48377 Mir344-201ENSMUST00000083634 95 ntBASIC1.18□□□□□ -2.22
Rfx1P48377 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Rfx1P48377 Gm26338-201ENSMUST00000102372 110 ntBASIC1.17□□□□□ -2.22
Rfx1P48377 Gm24073-201ENSMUST00000158177 106 ntBASIC1.17□□□□□ -2.22
Rfx1P48377 Gm25366-201ENSMUST00000158845 124 ntBASIC1.17□□□□□ -2.22
Rfx1P48377 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.17□□□□□ -2.22
Rfx1P48377 Gm26051-201ENSMUST00000104642 93 ntBASIC1.16□□□□□ -2.22
Rfx1P48377 Gm24183-201ENSMUST00000122572 93 ntBASIC1.16□□□□□ -2.22
Rfx1P48377 Snord2-201ENSMUST00000157899 69 ntBASIC1.16□□□□□ -2.22
Rfx1P48377 Gm22565-201ENSMUST00000175540 69 ntBASIC1.16□□□□□ -2.22
Rfx1P48377 Gm25768-201ENSMUST00000158570 98 ntBASIC1.15□□□□□ -2.23
Rfx1P48377 Gm25696-201ENSMUST00000082900 105 ntBASIC1.14□□□□□ -2.23
Rfx1P48377 Mir362-201ENSMUST00000093592 65 ntBASIC1.14□□□□□ -2.23
Rfx1P48377 Gm25506-201ENSMUST00000104339 70 ntBASIC1.13□□□□□ -2.23
Rfx1P48377 Gm43038-201ENSMUST00000202359 88 ntBASIC1.13□□□□□ -2.23
Rfx1P48377 Gm24983-201ENSMUST00000104457 69 ntBASIC1.12□□□□□ -2.23
Rfx1P48377 Gm23817-201ENSMUST00000158449 104 ntBASIC1.12□□□□□ -2.23
Rfx1P48377 Gm27975-201ENSMUST00000184400 101 ntBASIC1.12□□□□□ -2.23
Rfx1P48377 Gm27943-201ENSMUST00000184844 116 ntBASIC1.12□□□□□ -2.23
Rfx1P48377 Gm3702-201ENSMUST00000211754 346 ntBASIC1.12□□□□□ -2.23
Rfx1P48377 Mir200a-201ENSMUST00000083466 90 ntBASIC1.12□□□□□ -2.23
Rfx1P48377 Mir10b-201ENSMUST00000083566 68 ntBASIC1.12□□□□□ -2.23
Rfx1P48377 Gm25681-201ENSMUST00000083938 106 ntBASIC1.12□□□□□ -2.23
Rfx1P48377 Gm25378-201ENSMUST00000104333 129 ntBASIC1.11□□□□□ -2.23
Rfx1P48377 Gm25112-201ENSMUST00000122680 104 ntBASIC1.11□□□□□ -2.23
Rfx1P48377 Mir6380-201ENSMUST00000184334 81 ntBASIC1.11□□□□□ -2.23
Rfx1P48377 Gm28435-201ENSMUST00000185496 108 ntBASIC1.11□□□□□ -2.23
Rfx1P48377 Gm29047-201ENSMUST00000189816 108 ntBASIC1.11□□□□□ -2.23
Rfx1P48377 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.11□□□□□ -2.23
Rfx1P48377 Gm22827-201ENSMUST00000083766 107 ntBASIC1.11□□□□□ -2.23
Rfx1P48377 Gm22469-201ENSMUST00000104118 133 ntBASIC1.1□□□□□ -2.23
Rfx1P48377 Mir5117-201ENSMUST00000083226 84 ntBASIC1.1□□□□□ -2.23
Rfx1P48377 Gm25683-201ENSMUST00000083940 131 ntBASIC1.1□□□□□ -2.23
Rfx1P48377 Gm25894-201ENSMUST00000083458 75 ntBASIC1.09□□□□□ -2.23
Rfx1P48377 Snord33-201ENSMUST00000083694 84 ntBASIC1.09□□□□□ -2.23
Rfx1P48377 Gm23203-201ENSMUST00000104374 107 ntBASIC1.08□□□□□ -2.24
Rfx1P48377 Gm24321-201ENSMUST00000175348 80 ntBASIC1.08□□□□□ -2.24
Rfx1P48377 Mir6364-201ENSMUST00000183396 86 ntBASIC1.07□□□□□ -2.24
Rfx1P48377 Gm23468-201ENSMUST00000157125 108 ntBASIC1.06□□□□□ -2.24
Rfx1P48377 Gm24020-201ENSMUST00000180156 108 ntBASIC1.06□□□□□ -2.24
Rfx1P48377 Gm25622-201ENSMUST00000157217 104 ntBASIC1.05□□□□□ -2.24
Rfx1P48377 Gm24288-201ENSMUST00000157630 144 ntBASIC1.05□□□□□ -2.24
Rfx1P48377 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
Rfx1P48377 Gm25870-201ENSMUST00000179845 79 ntBASIC1.04□□□□□ -2.24
Rfx1P48377 AC113441.1-201ENSMUST00000223464 134 ntBASIC1.04□□□□□ -2.24
Rfx1P48377 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.03□□□□□ -2.24
Rfx1P48377 Gm23012-201ENSMUST00000104149 83 ntBASIC1.03□□□□□ -2.24
Rfx1P48377 Gm25160-201ENSMUST00000158914 102 ntBASIC1.03□□□□□ -2.24
Rfx1P48377 Gm22406-201ENSMUST00000174923 93 ntBASIC1.03□□□□□ -2.24
Rfx1P48377 Gm27289-201ENSMUST00000183341 82 ntBASIC1.03□□□□□ -2.24
Rfx1P48377 Gm27587-201ENSMUST00000185116 163 ntBASIC1.03□□□□□ -2.24
Rfx1P48377 Gm23788-201ENSMUST00000122535 106 ntBASIC1.02□□□□□ -2.25
Rfx1P48377 Mir3473d-201ENSMUST00000175346 81 ntBASIC1.02□□□□□ -2.25
Rfx1P48377 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.02□□□□□ -2.25
Rfx1P48377 Gm25322-201ENSMUST00000122556 104 ntBASIC1.01□□□□□ -2.25
Rfx1P48377 Gm23500-201ENSMUST00000157735 98 ntBASIC1.01□□□□□ -2.25
Rfx1P48377 Gm22203-201ENSMUST00000158605 58 ntBASIC1.01□□□□□ -2.25
Rfx1P48377 Gm22689-201ENSMUST00000102452 110 ntBASIC1□□□□□ -2.25
Rfx1P48377 Gm44455-201ENSMUST00000200061 82 ntBASIC1□□□□□ -2.25
Rfx1P48377 Mir219b-201ENSMUST00000198317 65 ntBASIC0.99□□□□□ -2.25
Rfx1P48377 Gm23008-201ENSMUST00000158946 80 ntBASIC0.98□□□□□ -2.25
Rfx1P48377 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.98□□□□□ -2.25
Rfx1P48377 Mir6389-201ENSMUST00000183661 102 ntBASIC0.97□□□□□ -2.25
Rfx1P48377 Gm44301-201ENSMUST00000200362 143 ntBASIC0.97□□□□□ -2.25
Rfx1P48377 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.97□□□□□ -2.25
Rfx1P48377 Gm25798-201ENSMUST00000082641 107 ntBASIC0.97□□□□□ -2.25
Rfx1P48377 Gm24162-201ENSMUST00000093665 102 ntBASIC0.97□□□□□ -2.25
Rfx1P48377 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.96□□□□□ -2.26
Rfx1P48377 Gm26207-201ENSMUST00000082909 104 ntBASIC0.96□□□□□ -2.26
Rfx1P48377 Mir27b-201ENSMUST00000083541 73 ntBASIC0.95□□□□□ -2.26
Rfx1P48377 Gm24278-201ENSMUST00000104239 127 ntBASIC0.94□□□□□ -2.26
Rfx1P48377 Gm25787-201ENSMUST00000104709 92 ntBASIC0.94□□□□□ -2.26
Rfx1P48377 Gm13577-201ENSMUST00000121365 205 ntBASIC0.94□□□□□ -2.26
Rfx1P48377 Gm38274-201ENSMUST00000195689 148 ntBASIC0.94□□□□□ -2.26
Rfx1P48377 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.94□□□□□ -2.26
Rfx1P48377 Gm22303-201ENSMUST00000082686 122 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 76,532 protein–RNA pairs in 236.9 ms