Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm43977-201ENSMUST00000203970 189 ntBASIC-0.17□□□□□ -2.44
Traf1P39428 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.17□□□□□ -2.44
Traf1P39428 Gm25337-201ENSMUST00000083723 104 ntBASIC-0.17□□□□□ -2.44
Traf1P39428 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.18□□□□□ -2.44
Traf1P39428 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
Traf1P39428 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.18□□□□□ -2.44
Traf1P39428 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.18□□□□□ -2.44
Traf1P39428 AC165138.1-201ENSMUST00000226984 270 ntBASIC-0.18□□□□□ -2.44
Traf1P39428 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.18□□□□□ -2.44
Traf1P39428 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.19□□□□□ -2.44
Traf1P39428 Mir6237-201ENSMUST00000183808 91 ntBASIC-0.19□□□□□ -2.44
Traf1P39428 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.19□□□□□ -2.44
Traf1P39428 Gm45429-201ENSMUST00000209527 172 ntBASIC-0.19□□□□□ -2.44
Traf1P39428 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.2□□□□□ -2.44
Traf1P39428 Gm26478-201ENSMUST00000122611 133 ntBASIC-0.2□□□□□ -2.44
Traf1P39428 Mir214-201ENSMUST00000083582 110 ntBASIC-0.2□□□□□ -2.44
Traf1P39428 Snord67-201ENSMUST00000104033 111 ntBASIC-0.21□□□□□ -2.44
Traf1P39428 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.21□□□□□ -2.44
Traf1P39428 Gm14947-201ENSMUST00000133704 303 ntBASIC-0.21□□□□□ -2.44
Traf1P39428 Gm24916-201ENSMUST00000157287 79 ntBASIC-0.21□□□□□ -2.44
Traf1P39428 Gm22384-201ENSMUST00000158187 104 ntBASIC-0.21□□□□□ -2.44
Traf1P39428 Gm24843-201ENSMUST00000158682 76 ntBASIC-0.21□□□□□ -2.44
Traf1P39428 Gm10351-201ENSMUST00000087694 125 ntBASIC-0.21□□□□□ -2.44
Traf1P39428 Gm25425-201ENSMUST00000157611 96 ntBASIC-0.22□□□□□ -2.44
Traf1P39428 Gm25889-201ENSMUST00000157775 107 ntBASIC-0.22□□□□□ -2.44
Traf1P39428 Gm22406-201ENSMUST00000174923 93 ntBASIC-0.22□□□□□ -2.44
Traf1P39428 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.22□□□□□ -2.44
Traf1P39428 Gm22297-201ENSMUST00000083312 106 ntBASIC-0.22□□□□□ -2.44
Traf1P39428 Gm24697-201ENSMUST00000083881 107 ntBASIC-0.22□□□□□ -2.44
Traf1P39428 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.23□□□□□ -2.45
Traf1P39428 Gm23434-201ENSMUST00000157179 100 ntBASIC-0.23□□□□□ -2.45
Traf1P39428 Gm22212-201ENSMUST00000158096 106 ntBASIC-0.23□□□□□ -2.45
Traf1P39428 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC-0.23□□□□□ -2.45
Traf1P39428 Gm2077-201ENSMUST00000195017 319 ntBASIC-0.23□□□□□ -2.45
Traf1P39428 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.23□□□□□ -2.45
Traf1P39428 Gm24001-201ENSMUST00000158463 85 ntBASIC-0.24□□□□□ -2.45
Traf1P39428 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.24□□□□□ -2.45
Traf1P39428 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.24□□□□□ -2.45
Traf1P39428 Gm24202-201ENSMUST00000082948 103 ntBASIC-0.24□□□□□ -2.45
Traf1P39428 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.25□□□□□ -2.45
Traf1P39428 Gm25656-201ENSMUST00000158466 66 ntBASIC-0.25□□□□□ -2.45
Traf1P39428 Gm23918-201ENSMUST00000175253 106 ntBASIC-0.25□□□□□ -2.45
Traf1P39428 Mir6904-201ENSMUST00000183443 67 ntBASIC-0.25□□□□□ -2.45
Traf1P39428 Gm6607-201ENSMUST00000215035 328 ntBASIC-0.25□□□□□ -2.45
Traf1P39428 mt-Tn-201ENSMUST00000082399 71 ntBASIC-0.25□□□□□ -2.45
Traf1P39428 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.26□□□□□ -2.45
Traf1P39428 Gm23715-201ENSMUST00000157354 106 ntBASIC-0.26□□□□□ -2.45
Traf1P39428 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.26□□□□□ -2.45
Traf1P39428 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC-0.26□□□□□ -2.45
Traf1P39428 mt-Tt-201ENSMUST00000082422 67 ntBASIC-0.26□□□□□ -2.45
Traf1P39428 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC-0.27□□□□□ -2.45
Traf1P39428 Gm25772-201ENSMUST00000158574 56 ntBASIC-0.27□□□□□ -2.45
Traf1P39428 Mir669h-201ENSMUST00000116944 125 ntBASIC-0.28□□□□□ -2.45
Traf1P39428 Gm22324-201ENSMUST00000158903 114 ntBASIC-0.28□□□□□ -2.45
Traf1P39428 Mir487b-201ENSMUST00000102265 82 ntBASIC-0.29□□□□□ -2.46
Traf1P39428 Gm24580-201ENSMUST00000103965 131 ntBASIC-0.29□□□□□ -2.46
Traf1P39428 Gm25915-201ENSMUST00000104265 126 ntBASIC-0.29□□□□□ -2.46
Traf1P39428 Gm25338-201ENSMUST00000116849 120 ntBASIC-0.29□□□□□ -2.46
Traf1P39428 Gm14533-201ENSMUST00000117088 93 ntBASIC-0.29□□□□□ -2.46
Traf1P39428 Gm22607-201ENSMUST00000158291 105 ntBASIC-0.29□□□□□ -2.46
Traf1P39428 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.29□□□□□ -2.46
Traf1P39428 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.29□□□□□ -2.46
Traf1P39428 Traj38-201ENSMUST00000103704 62 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
Traf1P39428 Gm24887-201ENSMUST00000104386 108 ntBASIC-0.3□□□□□ -2.46
Traf1P39428 mt-Tw-201ENSMUST00000082397 67 ntBASIC-0.3□□□□□ -2.46
Traf1P39428 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.31□□□□□ -2.46
Traf1P39428 Gm24587-201ENSMUST00000116697 89 ntBASIC-0.32□□□□□ -2.46
Traf1P39428 Gm23314-201ENSMUST00000157218 107 ntBASIC-0.32□□□□□ -2.46
Traf1P39428 Gm24877-201ENSMUST00000158779 116 ntBASIC-0.32□□□□□ -2.46
Traf1P39428 Gm25032-201ENSMUST00000175411 84 ntBASIC-0.32□□□□□ -2.46
Traf1P39428 Mir7651-201ENSMUST00000184154 64 ntBASIC-0.32□□□□□ -2.46
Traf1P39428 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.32□□□□□ -2.46
Traf1P39428 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-0.32□□□□□ -2.46
Traf1P39428 AC129019.2-201ENSMUST00000222063 202 ntBASIC-0.33□□□□□ -2.46
Traf1P39428 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.33□□□□□ -2.46
Traf1P39428 Gm10813-201ENSMUST00000099936 90 ntBASIC-0.33□□□□□ -2.46
Traf1P39428 Gm23483-201ENSMUST00000104179 108 ntBASIC-0.34□□□□□ -2.46
Traf1P39428 Gm25275-201ENSMUST00000104297 129 ntBASIC-0.34□□□□□ -2.46
Traf1P39428 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.34□□□□□ -2.46
Traf1P39428 Gm25978-201ENSMUST00000158698 90 ntBASIC-0.34□□□□□ -2.46
Traf1P39428 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.34□□□□□ -2.46
Traf1P39428 AC166341.8-201ENSMUST00000221267 108 ntBASIC-0.34□□□□□ -2.46
Traf1P39428 Gm23528-201ENSMUST00000104571 132 ntBASIC-0.35□□□□□ -2.47
Traf1P39428 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC-0.35□□□□□ -2.47
Traf1P39428 Mir7038-201ENSMUST00000184833 71 ntBASIC-0.35□□□□□ -2.47
Traf1P39428 Gm25812-201ENSMUST00000082751 103 ntBASIC-0.35□□□□□ -2.47
Traf1P39428 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.35□□□□□ -2.47
Traf1P39428 Gm23044-201ENSMUST00000157891 100 ntBASIC-0.36□□□□□ -2.47
Traf1P39428 Gm26454-201ENSMUST00000082682 107 ntBASIC-0.36□□□□□ -2.47
Traf1P39428 Snora26-201ENSMUST00000175614 121 ntBASIC-0.37□□□□□ -2.47
Traf1P39428 Gm22070-201ENSMUST00000178475 107 ntBASIC-0.37□□□□□ -2.47
Traf1P39428 Gm22286-201ENSMUST00000179708 107 ntBASIC-0.37□□□□□ -2.47
Traf1P39428 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.37□□□□□ -2.47
Traf1P39428 Gm26109-201ENSMUST00000083970 70 ntBASIC-0.37□□□□□ -2.47
Traf1P39428 Gm24183-201ENSMUST00000122572 93 ntBASIC-0.38□□□□□ -2.47
Traf1P39428 Gm25522-201ENSMUST00000158394 105 ntBASIC-0.38□□□□□ -2.47
Traf1P39428 Gm23966-201ENSMUST00000179823 107 ntBASIC-0.38□□□□□ -2.47
Traf1P39428 AL845349.1-201ENSMUST00000213794 78 ntBASIC-0.38□□□□□ -2.47
Traf1P39428 AC140930.2-201ENSMUST00000221803 109 ntBASIC-0.38□□□□□ -2.47
Traf1P39428 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 76,532 protein–RNA pairs in 175.2 ms