Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Mir6985-201ENSMUST00000184641 61 ntBASIC1.1□□□□□ -2.23
Usp4P35123 Gm42506-201ENSMUST00000202009 150 ntBASIC1.1□□□□□ -2.23
Usp4P35123 Gm24162-201ENSMUST00000093665 102 ntBASIC1.1□□□□□ -2.23
Usp4P35123 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.1□□□□□ -2.23
Usp4P35123 Gm23989-201ENSMUST00000117030 66 ntBASIC1.09□□□□□ -2.23
Usp4P35123 Mir15a-201ENSMUST00000175266 84 ntBASIC1.09□□□□□ -2.23
Usp4P35123 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
Usp4P35123 Gm25061-201ENSMUST00000104665 107 ntBASIC1.08□□□□□ -2.24
Usp4P35123 Gm25300-201ENSMUST00000175284 84 ntBASIC1.08□□□□□ -2.24
Usp4P35123 Mir6380-201ENSMUST00000184334 81 ntBASIC1.08□□□□□ -2.24
Usp4P35123 Mir1949-202ENSMUST00000199259 70 ntBASIC1.08□□□□□ -2.24
Usp4P35123 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.08□□□□□ -2.24
Usp4P35123 Mir344-201ENSMUST00000083634 95 ntBASIC1.08□□□□□ -2.24
Usp4P35123 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.08□□□□□ -2.24
Usp4P35123 Gm24342-201ENSMUST00000103907 104 ntBASIC1.07□□□□□ -2.24
Usp4P35123 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Usp4P35123 Gm22203-201ENSMUST00000158605 58 ntBASIC1.07□□□□□ -2.24
Usp4P35123 Mir22-201ENSMUST00000083595 95 ntBASIC1.07□□□□□ -2.24
Usp4P35123 Gm25683-201ENSMUST00000083940 131 ntBASIC1.07□□□□□ -2.24
Usp4P35123 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Usp4P35123 Gm25040-201ENSMUST00000103877 66 ntBASIC1.06□□□□□ -2.24
Usp4P35123 Gm25322-201ENSMUST00000122556 104 ntBASIC1.06□□□□□ -2.24
Usp4P35123 Gm23893-201ENSMUST00000158106 134 ntBASIC1.06□□□□□ -2.24
Usp4P35123 Gm25715-201ENSMUST00000158627 125 ntBASIC1.06□□□□□ -2.24
Usp4P35123 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.06□□□□□ -2.24
Usp4P35123 Gm24674-201ENSMUST00000179194 104 ntBASIC1.06□□□□□ -2.24
Usp4P35123 Mir376b-201ENSMUST00000195930 82 ntBASIC1.06□□□□□ -2.24
Usp4P35123 Gm44458-201ENSMUST00000196594 143 ntBASIC1.06□□□□□ -2.24
Usp4P35123 Gm25382-201ENSMUST00000157811 97 ntBASIC1.05□□□□□ -2.24
Usp4P35123 Gm22520-201ENSMUST00000158269 129 ntBASIC1.05□□□□□ -2.24
Usp4P35123 Gm25366-201ENSMUST00000158845 124 ntBASIC1.05□□□□□ -2.24
Usp4P35123 Mir7663-201ENSMUST00000183950 61 ntBASIC1.05□□□□□ -2.24
Usp4P35123 Gm28435-201ENSMUST00000185496 108 ntBASIC1.05□□□□□ -2.24
Usp4P35123 Gm29047-201ENSMUST00000189816 108 ntBASIC1.05□□□□□ -2.24
Usp4P35123 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.05□□□□□ -2.24
Usp4P35123 Gm24202-201ENSMUST00000082948 103 ntBASIC1.05□□□□□ -2.24
Usp4P35123 Gm24431-201ENSMUST00000104073 66 ntBASIC1.04□□□□□ -2.24
Usp4P35123 Gm24983-201ENSMUST00000104457 69 ntBASIC1.03□□□□□ -2.24
Usp4P35123 Snora26-201ENSMUST00000175614 121 ntBASIC1.03□□□□□ -2.24
Usp4P35123 Gm44490-201ENSMUST00000198566 127 ntBASIC1.03□□□□□ -2.24
Usp4P35123 Gm25644-201ENSMUST00000083209 107 ntBASIC1.03□□□□□ -2.24
Usp4P35123 Gm25416-201ENSMUST00000104221 107 ntBASIC1.02□□□□□ -2.25
Usp4P35123 Gm25506-201ENSMUST00000104339 70 ntBASIC1.02□□□□□ -2.25
Usp4P35123 Mir466l-201ENSMUST00000104866 121 ntBASIC1.02□□□□□ -2.25
Usp4P35123 Snord2-201ENSMUST00000157899 69 ntBASIC1.02□□□□□ -2.25
Usp4P35123 Gm25542-201ENSMUST00000116889 94 ntBASIC1.01□□□□□ -2.25
Usp4P35123 Gm13065-201ENSMUST00000119178 141 ntBASIC1.01□□□□□ -2.25
Usp4P35123 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.01□□□□□ -2.25
Usp4P35123 Gm25622-201ENSMUST00000157217 104 ntBASIC1.01□□□□□ -2.25
Usp4P35123 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.01□□□□□ -2.25
Usp4P35123 Gm26207-201ENSMUST00000082909 104 ntBASIC1.01□□□□□ -2.25
Usp4P35123 Mir27b-201ENSMUST00000083541 73 ntBASIC1.01□□□□□ -2.25
Usp4P35123 Gm22406-201ENSMUST00000174923 93 ntBASIC1□□□□□ -2.25
Usp4P35123 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Usp4P35123 Gm25740-201ENSMUST00000180247 107 ntBASIC1□□□□□ -2.25
Usp4P35123 Snord32a-201ENSMUST00000083285 83 ntBASIC1□□□□□ -2.25
Usp4P35123 Gm25894-201ENSMUST00000083458 75 ntBASIC0.99□□□□□ -2.25
Usp4P35123 Gm24233-201ENSMUST00000104317 122 ntBASIC0.98□□□□□ -2.25
Usp4P35123 Gm25496-201ENSMUST00000104430 120 ntBASIC0.98□□□□□ -2.25
Usp4P35123 Gm25166-201ENSMUST00000158909 111 ntBASIC0.98□□□□□ -2.25
Usp4P35123 Gm25854-201ENSMUST00000082792 72 ntBASIC0.98□□□□□ -2.25
Usp4P35123 Gm24203-201ENSMUST00000082949 114 ntBASIC0.98□□□□□ -2.25
Usp4P35123 Mir695-201ENSMUST00000102261 109 ntBASIC0.97□□□□□ -2.25
Usp4P35123 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.97□□□□□ -2.25
Usp4P35123 Mir7010-201ENSMUST00000183464 63 ntBASIC0.97□□□□□ -2.25
Usp4P35123 Gm25964-201ENSMUST00000157171 97 ntBASIC0.96□□□□□ -2.26
Usp4P35123 Gm24868-201ENSMUST00000157265 136 ntBASIC0.96□□□□□ -2.26
Usp4P35123 Gm24077-201ENSMUST00000158183 136 ntBASIC0.96□□□□□ -2.26
Usp4P35123 Gm24020-201ENSMUST00000180156 108 ntBASIC0.96□□□□□ -2.26
Usp4P35123 Gm43038-201ENSMUST00000202359 88 ntBASIC0.96□□□□□ -2.26
Usp4P35123 DQ267101-201ENSMUST00000082562 73 ntBASIC0.96□□□□□ -2.26
Usp4P35123 Gm22652-201ENSMUST00000083207 131 ntBASIC0.96□□□□□ -2.26
Usp4P35123 Mir33-201ENSMUST00000083531 69 ntBASIC0.96□□□□□ -2.26
Usp4P35123 Mir10b-201ENSMUST00000083566 68 ntBASIC0.96□□□□□ -2.26
Usp4P35123 Snord35a-201ENSMUST00000083884 90 ntBASIC0.96□□□□□ -2.26
Usp4P35123 Gm23708-201ENSMUST00000104367 123 ntBASIC0.95□□□□□ -2.26
Usp4P35123 Gm24593-201ENSMUST00000122507 106 ntBASIC0.95□□□□□ -2.26
Usp4P35123 Gm25045-201ENSMUST00000122670 99 ntBASIC0.95□□□□□ -2.26
Usp4P35123 Gm24199-201ENSMUST00000157808 136 ntBASIC0.95□□□□□ -2.26
Usp4P35123 Gm27717-201ENSMUST00000183933 151 ntBASIC0.95□□□□□ -2.26
Usp4P35123 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
Usp4P35123 Gm23012-201ENSMUST00000104149 83 ntBASIC0.94□□□□□ -2.26
Usp4P35123 Gm6985-201ENSMUST00000121255 271 ntBASIC0.94□□□□□ -2.26
Usp4P35123 Gm25328-201ENSMUST00000175013 107 ntBASIC0.94□□□□□ -2.26
Usp4P35123 Gm38274-201ENSMUST00000195689 148 ntBASIC0.94□□□□□ -2.26
Usp4P35123 Gm25756-201ENSMUST00000103990 136 ntBASIC0.93□□□□□ -2.26
Usp4P35123 Gm24064-201ENSMUST00000157486 106 ntBASIC0.93□□□□□ -2.26
Usp4P35123 Gm24678-201ENSMUST00000158756 104 ntBASIC0.93□□□□□ -2.26
Usp4P35123 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Usp4P35123 Gm22100-201ENSMUST00000157926 63 ntBASIC0.92□□□□□ -2.26
Usp4P35123 Gm24321-201ENSMUST00000175348 80 ntBASIC0.92□□□□□ -2.26
Usp4P35123 Gm25870-201ENSMUST00000179845 79 ntBASIC0.92□□□□□ -2.26
Usp4P35123 Gm44455-201ENSMUST00000200061 82 ntBASIC0.92□□□□□ -2.26
Usp4P35123 Gm44301-201ENSMUST00000200362 143 ntBASIC0.92□□□□□ -2.26
Usp4P35123 Gm25417-201ENSMUST00000104212 131 ntBASIC0.91□□□□□ -2.26
Usp4P35123 Gm22522-201ENSMUST00000158271 151 ntBASIC0.91□□□□□ -2.26
Usp4P35123 Gm26359-201ENSMUST00000158873 101 ntBASIC0.91□□□□□ -2.26
Usp4P35123 Gm20386-201ENSMUST00000174010 132 ntBASIC0.91□□□□□ -2.26
Usp4P35123 AC158537.2-201ENSMUST00000223575 150 ntBASIC0.91□□□□□ -2.26
Usp4P35123 Gm26338-201ENSMUST00000102372 110 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 195.5 ms