Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm23672-201ENSMUST00000157471 107 ntBASIC0.44□□□□□ -2.34
Cbx4O55187 Gm23644-201ENSMUST00000157856 77 ntBASIC0.44□□□□□ -2.34
Cbx4O55187 Mir3105-201ENSMUST00000175480 85 ntBASIC0.44□□□□□ -2.34
Cbx4O55187 Gm24801-201ENSMUST00000178503 105 ntBASIC0.44□□□□□ -2.34
Cbx4O55187 Gm22303-201ENSMUST00000082686 122 ntBASIC0.44□□□□□ -2.34
Cbx4O55187 Gm26081-201ENSMUST00000104068 132 ntBASIC0.43□□□□□ -2.34
Cbx4O55187 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.43□□□□□ -2.34
Cbx4O55187 Gm45541-201ENSMUST00000210443 54 ntBASIC0.43□□□□□ -2.34
Cbx4O55187 Mir29a-201ENSMUST00000083676 88 ntBASIC0.43□□□□□ -2.34
Cbx4O55187 Gm26303-201ENSMUST00000116845 119 ntBASIC0.42□□□□□ -2.34
Cbx4O55187 Gm22239-201ENSMUST00000175220 103 ntBASIC0.42□□□□□ -2.34
Cbx4O55187 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.42□□□□□ -2.34
Cbx4O55187 AC132833.2-201ENSMUST00000228699 157 ntBASIC0.42□□□□□ -2.34
Cbx4O55187 Snord2-201ENSMUST00000157899 69 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm25380-201ENSMUST00000175463 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm24641-201ENSMUST00000178055 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm25484-201ENSMUST00000178217 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm26138-201ENSMUST00000179236 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm22821-201ENSMUST00000179288 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm44490-201ENSMUST00000198566 127 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm23140-201ENSMUST00000082487 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm23298-201ENSMUST00000083181 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm24614-201ENSMUST00000083269 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm22057-201ENSMUST00000083387 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm25516-201ENSMUST00000083857 107 ntBASIC0.41□□□□□ -2.34
Cbx4O55187 Gm25408-201ENSMUST00000104104 133 ntBASIC0.4□□□□□ -2.35
Cbx4O55187 Gm23126-201ENSMUST00000104260 134 ntBASIC0.4□□□□□ -2.35
Cbx4O55187 Gm24482-201ENSMUST00000117005 93 ntBASIC0.4□□□□□ -2.35
Cbx4O55187 Gm26478-201ENSMUST00000122611 133 ntBASIC0.4□□□□□ -2.35
Cbx4O55187 Gm44327-201ENSMUST00000200068 117 ntBASIC0.4□□□□□ -2.35
Cbx4O55187 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.4□□□□□ -2.35
Cbx4O55187 Gm22213-201ENSMUST00000157564 119 ntBASIC0.39□□□□□ -2.35
Cbx4O55187 Gm25366-201ENSMUST00000158845 124 ntBASIC0.39□□□□□ -2.35
Cbx4O55187 Gm23012-201ENSMUST00000104149 83 ntBASIC0.38□□□□□ -2.35
Cbx4O55187 Gm22672-201ENSMUST00000104414 134 ntBASIC0.38□□□□□ -2.35
Cbx4O55187 Gm22983-201ENSMUST00000158308 104 ntBASIC0.38□□□□□ -2.35
Cbx4O55187 Gm24202-201ENSMUST00000082948 103 ntBASIC0.38□□□□□ -2.35
Cbx4O55187 Gm24099-201ENSMUST00000083384 107 ntBASIC0.38□□□□□ -2.35
Cbx4O55187 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC0.38□□□□□ -2.35
Cbx4O55187 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.37□□□□□ -2.35
Cbx4O55187 Gm23969-201ENSMUST00000083324 74 ntBASIC0.37□□□□□ -2.35
Cbx4O55187 Gm24697-201ENSMUST00000083881 107 ntBASIC0.37□□□□□ -2.35
Cbx4O55187 Gm22770-201ENSMUST00000158368 67 ntBASIC0.36□□□□□ -2.35
Cbx4O55187 Gm44828-201ENSMUST00000203745 106 ntBASIC0.36□□□□□ -2.35
Cbx4O55187 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.36□□□□□ -2.35
Cbx4O55187 Gm24983-201ENSMUST00000104457 69 ntBASIC0.35□□□□□ -2.35
Cbx4O55187 Gm22100-201ENSMUST00000157926 63 ntBASIC0.35□□□□□ -2.35
Cbx4O55187 Mir5619-201ENSMUST00000176065 61 ntBASIC0.35□□□□□ -2.35
Cbx4O55187 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Cbx4O55187 Gm44481-201ENSMUST00000197288 84 ntBASIC0.34□□□□□ -2.36
Cbx4O55187 Gm44345-201ENSMUST00000199560 135 ntBASIC0.34□□□□□ -2.36
Cbx4O55187 Gm44339-201ENSMUST00000200598 84 ntBASIC0.34□□□□□ -2.36
Cbx4O55187 AC160962.3-201ENSMUST00000225914 112 ntBASIC0.34□□□□□ -2.36
Cbx4O55187 Gm23783-201ENSMUST00000157941 102 ntBASIC0.33□□□□□ -2.36
Cbx4O55187 Gm23261-201ENSMUST00000158316 136 ntBASIC0.33□□□□□ -2.36
Cbx4O55187 Gm22759-201ENSMUST00000102276 96 ntBASIC0.32□□□□□ -2.36
Cbx4O55187 Gm26253-201ENSMUST00000122493 103 ntBASIC0.32□□□□□ -2.36
Cbx4O55187 Gm22203-201ENSMUST00000158605 58 ntBASIC0.32□□□□□ -2.36
Cbx4O55187 Gm25160-201ENSMUST00000158914 102 ntBASIC0.32□□□□□ -2.36
Cbx4O55187 Gm27475-201ENSMUST00000183420 61 ntBASIC0.32□□□□□ -2.36
Cbx4O55187 Mir7065-201ENSMUST00000185110 61 ntBASIC0.32□□□□□ -2.36
Cbx4O55187 Gm23244-201ENSMUST00000083375 92 ntBASIC0.32□□□□□ -2.36
Cbx4O55187 Snora2b-201ENSMUST00000084005 137 ntBASIC0.32□□□□□ -2.36
Cbx4O55187 Gm27980-201ENSMUST00000184094 169 ntBASIC0.31□□□□□ -2.36
Cbx4O55187 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.31□□□□□ -2.36
Cbx4O55187 Gm22140-201ENSMUST00000158745 120 ntBASIC0.3□□□□□ -2.36
Cbx4O55187 Gm25633-201ENSMUST00000178565 107 ntBASIC0.3□□□□□ -2.36
Cbx4O55187 Gm42845-201ENSMUST00000197766 105 ntBASIC0.3□□□□□ -2.36
Cbx4O55187 Snord95-201ENSMUST00000082846 68 ntBASIC0.3□□□□□ -2.36
Cbx4O55187 Gm26152-201ENSMUST00000157427 101 ntBASIC0.29□□□□□ -2.36
Cbx4O55187 Gm44803-201ENSMUST00000204384 156 ntBASIC0.29□□□□□ -2.36
Cbx4O55187 Gm23347-201ENSMUST00000083823 82 ntBASIC0.29□□□□□ -2.36
Cbx4O55187 Gm25879-201ENSMUST00000104330 107 ntBASIC0.28□□□□□ -2.36
Cbx4O55187 Scarna8-201ENSMUST00000158333 131 ntBASIC0.28□□□□□ -2.36
Cbx4O55187 Gm24884-201ENSMUST00000158784 119 ntBASIC0.28□□□□□ -2.36
Cbx4O55187 Gm26007-201ENSMUST00000158798 120 ntBASIC0.28□□□□□ -2.36
Cbx4O55187 Gm22406-201ENSMUST00000174923 93 ntBASIC0.28□□□□□ -2.36
Cbx4O55187 Gm25756-201ENSMUST00000103990 136 ntBASIC0.27□□□□□ -2.37
Cbx4O55187 Mir1197-201ENSMUST00000117037 120 ntBASIC0.27□□□□□ -2.37
Cbx4O55187 Mir7079-201ENSMUST00000184697 69 ntBASIC0.27□□□□□ -2.37
Cbx4O55187 Gm26438-201ENSMUST00000082593 107 ntBASIC0.27□□□□□ -2.37
Cbx4O55187 Gm23790-201ENSMUST00000083013 107 ntBASIC0.27□□□□□ -2.37
Cbx4O55187 Mir224-201ENSMUST00000083608 82 ntBASIC0.27□□□□□ -2.37
Cbx4O55187 Gm25055-201ENSMUST00000157369 76 ntBASIC0.26□□□□□ -2.37
Cbx4O55187 Gm25656-201ENSMUST00000158466 66 ntBASIC0.26□□□□□ -2.37
Cbx4O55187 Gm26116-201ENSMUST00000175600 77 ntBASIC0.26□□□□□ -2.37
Cbx4O55187 Gm26466-201ENSMUST00000179615 79 ntBASIC0.26□□□□□ -2.37
Cbx4O55187 Gm29047-201ENSMUST00000189816 108 ntBASIC0.26□□□□□ -2.37
Cbx4O55187 Gm22981-201ENSMUST00000082611 75 ntBASIC0.26□□□□□ -2.37
Cbx4O55187 Mir3083-201ENSMUST00000175377 64 ntBASIC0.25□□□□□ -2.37
Cbx4O55187 Mir18-201ENSMUST00000083469 96 ntBASIC0.25□□□□□ -2.37
Cbx4O55187 Gm26425-201ENSMUST00000122529 82 ntBASIC0.24□□□□□ -2.37
Cbx4O55187 Gm25449-201ENSMUST00000179389 79 ntBASIC0.24□□□□□ -2.37
Cbx4O55187 Gm28001-201ENSMUST00000183561 117 ntBASIC0.24□□□□□ -2.37
Cbx4O55187 Gm23528-201ENSMUST00000104571 132 ntBASIC0.23□□□□□ -2.37
Cbx4O55187 Gm25787-201ENSMUST00000104709 92 ntBASIC0.23□□□□□ -2.37
Cbx4O55187 Gm24833-201ENSMUST00000116775 120 ntBASIC0.23□□□□□ -2.37
Cbx4O55187 Gm24384-201ENSMUST00000122693 75 ntBASIC0.23□□□□□ -2.37
Cbx4O55187 Gm23821-201ENSMUST00000158738 106 ntBASIC0.23□□□□□ -2.37
Cbx4O55187 Gm23020-201ENSMUST00000158766 253 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 166.7 ms