Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm24311-201ENSMUST00000082570 104 ntBASIC1.7□□□□□ -2.14
Prpf40aQ9R1C7 Mir34c-201ENSMUST00000083653 77 ntBASIC1.7□□□□□ -2.14
Prpf40aQ9R1C7 Gm24202-201ENSMUST00000082948 103 ntBASIC1.69□□□□□ -2.14
Prpf40aQ9R1C7 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm22233-201ENSMUST00000157464 114 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm25868-201ENSMUST00000158253 114 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm25870-201ENSMUST00000179845 79 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm26207-201ENSMUST00000082909 104 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Mir500-201ENSMUST00000093600 92 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm25416-201ENSMUST00000104221 107 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Gm15115-201ENSMUST00000121145 264 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Gm27415-201ENSMUST00000183720 95 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Gm43907-201ENSMUST00000203128 117 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Gm25128-201ENSMUST00000083339 76 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm6272-201ENSMUST00000121256 171 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm24868-201ENSMUST00000157265 136 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm24199-201ENSMUST00000157808 136 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm24077-201ENSMUST00000158183 136 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm22522-201ENSMUST00000158271 151 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm44962-201ENSMUST00000206460 279 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Mir377-201ENSMUST00000083504 68 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.15
Prpf40aQ9R1C7 Gm23991-201ENSMUST00000117033 93 ntBASIC1.65□□□□□ -2.15
Prpf40aQ9R1C7 Mir100-201ENSMUST00000175270 80 ntBASIC1.65□□□□□ -2.15
Prpf40aQ9R1C7 Mir320-201ENSMUST00000083594 82 ntBASIC1.65□□□□□ -2.15
Prpf40aQ9R1C7 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.64□□□□□ -2.15
Prpf40aQ9R1C7 Gm25622-201ENSMUST00000157217 104 ntBASIC1.64□□□□□ -2.15
Prpf40aQ9R1C7 Gm22100-201ENSMUST00000157926 63 ntBASIC1.64□□□□□ -2.15
Prpf40aQ9R1C7 Gm25366-201ENSMUST00000158845 124 ntBASIC1.64□□□□□ -2.15
Prpf40aQ9R1C7 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 Gm25417-201ENSMUST00000104212 131 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 Mir3079-201ENSMUST00000175428 90 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 Snora75-201ENSMUST00000082903 133 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm25832-201ENSMUST00000104140 130 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm22540-201ENSMUST00000158168 117 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm23267-201ENSMUST00000178490 132 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Mir376b-201ENSMUST00000195930 82 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm23056-201ENSMUST00000082803 111 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Prpf40aQ9R1C7 Gm22786-201ENSMUST00000104086 122 ntBASIC1.61□□□□□ -2.15
Prpf40aQ9R1C7 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.61□□□□□ -2.15
Prpf40aQ9R1C7 Gm23221-201ENSMUST00000158118 93 ntBASIC1.61□□□□□ -2.15
Prpf40aQ9R1C7 Gm24988-201ENSMUST00000104460 121 ntBASIC1.6□□□□□ -2.15
Prpf40aQ9R1C7 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Prpf40aQ9R1C7 Gm25040-201ENSMUST00000103877 66 ntBASIC1.59□□□□□ -2.15
Prpf40aQ9R1C7 Gm24064-201ENSMUST00000157486 106 ntBASIC1.59□□□□□ -2.15
Prpf40aQ9R1C7 Gm23853-201ENSMUST00000158375 104 ntBASIC1.59□□□□□ -2.15
Prpf40aQ9R1C7 Gm42533-201ENSMUST00000196247 157 ntBASIC1.59□□□□□ -2.15
Prpf40aQ9R1C7 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
Prpf40aQ9R1C7 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Gm6985-201ENSMUST00000121255 271 ntBASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Gm24895-201ENSMUST00000122742 74 ntBASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Gm24073-201ENSMUST00000158177 106 ntBASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Mir6342-201ENSMUST00000183870 125 ntBASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Gm25495-201ENSMUST00000104431 131 ntBASIC1.57□□□□□ -2.16
Prpf40aQ9R1C7 Gm23558-201ENSMUST00000157823 80 ntBASIC1.57□□□□□ -2.16
Prpf40aQ9R1C7 Gm23293-201ENSMUST00000082552 104 ntBASIC1.57□□□□□ -2.16
Prpf40aQ9R1C7 Gm23766-201ENSMUST00000103894 80 ntBASIC1.56□□□□□ -2.16
Prpf40aQ9R1C7 Snord13-201ENSMUST00000157627 104 ntBASIC1.56□□□□□ -2.16
Prpf40aQ9R1C7 Gm24221-201ENSMUST00000158833 313 ntBASIC1.56□□□□□ -2.16
Prpf40aQ9R1C7 Gm25991-201ENSMUST00000102439 99 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm24983-201ENSMUST00000104457 69 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm23989-201ENSMUST00000117030 66 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm24495-201ENSMUST00000178575 79 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm23714-201ENSMUST00000179259 105 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm22253-201ENSMUST00000179870 79 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm27493-201ENSMUST00000184128 78 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Mir1949-202ENSMUST00000199259 70 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm22652-201ENSMUST00000083207 131 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm13065-201ENSMUST00000119178 141 ntBASIC1.54□□□□□ -2.16
Prpf40aQ9R1C7 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Prpf40aQ9R1C7 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Prpf40aQ9R1C7 Gm22559-201ENSMUST00000157329 134 ntBASIC1.53□□□□□ -2.16
Prpf40aQ9R1C7 Snord2-201ENSMUST00000157899 69 ntBASIC1.53□□□□□ -2.16
Prpf40aQ9R1C7 Gm24902-201ENSMUST00000158126 123 ntBASIC1.53□□□□□ -2.16
Prpf40aQ9R1C7 Gm27717-201ENSMUST00000183933 151 ntBASIC1.53□□□□□ -2.16
Prpf40aQ9R1C7 Gm25166-201ENSMUST00000158909 111 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 Gm25831-201ENSMUST00000158924 163 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 Gm22406-201ENSMUST00000174923 93 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 Gm23967-201ENSMUST00000175062 78 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 Gm25609-201ENSMUST00000104019 104 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm26499-201ENSMUST00000178544 79 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm26096-201ENSMUST00000179084 79 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Mir8116-201ENSMUST00000184134 97 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm6293-201ENSMUST00000050339 195 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm22067-201ENSMUST00000122790 107 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms