Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm24311-201ENSMUST00000082570 104 ntBASIC1.7□□□□□ -2.14
Prpf40aQ9R1C7 Mir34c-201ENSMUST00000083653 77 ntBASIC1.7□□□□□ -2.14
Prpf40aQ9R1C7 Gm24202-201ENSMUST00000082948 103 ntBASIC1.69□□□□□ -2.14
Prpf40aQ9R1C7 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm22233-201ENSMUST00000157464 114 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm25868-201ENSMUST00000158253 114 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm25870-201ENSMUST00000179845 79 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm26207-201ENSMUST00000082909 104 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Mir500-201ENSMUST00000093600 92 ntBASIC1.68□□□□□ -2.14
Prpf40aQ9R1C7 Gm25416-201ENSMUST00000104221 107 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Gm15115-201ENSMUST00000121145 264 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Gm27415-201ENSMUST00000183720 95 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Gm43907-201ENSMUST00000203128 117 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Gm25128-201ENSMUST00000083339 76 ntBASIC1.67□□□□□ -2.14
Prpf40aQ9R1C7 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm6272-201ENSMUST00000121256 171 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm24868-201ENSMUST00000157265 136 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm24199-201ENSMUST00000157808 136 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm24077-201ENSMUST00000158183 136 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm22522-201ENSMUST00000158271 151 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Gm44962-201ENSMUST00000206460 279 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Mir377-201ENSMUST00000083504 68 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.66□□□□□ -2.14
Prpf40aQ9R1C7 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.65□□□□□ -2.15
Prpf40aQ9R1C7 Gm23991-201ENSMUST00000117033 93 ntBASIC1.65□□□□□ -2.15
Prpf40aQ9R1C7 Mir100-201ENSMUST00000175270 80 ntBASIC1.65□□□□□ -2.15
Prpf40aQ9R1C7 Mir320-201ENSMUST00000083594 82 ntBASIC1.65□□□□□ -2.15
Prpf40aQ9R1C7 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.64□□□□□ -2.15
Prpf40aQ9R1C7 Gm25622-201ENSMUST00000157217 104 ntBASIC1.64□□□□□ -2.15
Prpf40aQ9R1C7 Gm22100-201ENSMUST00000157926 63 ntBASIC1.64□□□□□ -2.15
Prpf40aQ9R1C7 Gm25366-201ENSMUST00000158845 124 ntBASIC1.64□□□□□ -2.15
Prpf40aQ9R1C7 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 Gm25417-201ENSMUST00000104212 131 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 Mir3079-201ENSMUST00000175428 90 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 Snora75-201ENSMUST00000082903 133 ntBASIC1.63□□□□□ -2.15
Prpf40aQ9R1C7 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm25832-201ENSMUST00000104140 130 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm22540-201ENSMUST00000158168 117 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm23267-201ENSMUST00000178490 132 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Mir376b-201ENSMUST00000195930 82 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm23056-201ENSMUST00000082803 111 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Prpf40aQ9R1C7 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
Prpf40aQ9R1C7 Gm22786-201ENSMUST00000104086 122 ntBASIC1.61□□□□□ -2.15
Prpf40aQ9R1C7 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.61□□□□□ -2.15
Prpf40aQ9R1C7 Gm23221-201ENSMUST00000158118 93 ntBASIC1.61□□□□□ -2.15
Prpf40aQ9R1C7 Gm24988-201ENSMUST00000104460 121 ntBASIC1.6□□□□□ -2.15
Prpf40aQ9R1C7 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
Prpf40aQ9R1C7 Gm25040-201ENSMUST00000103877 66 ntBASIC1.59□□□□□ -2.15
Prpf40aQ9R1C7 Gm24064-201ENSMUST00000157486 106 ntBASIC1.59□□□□□ -2.15
Prpf40aQ9R1C7 Gm23853-201ENSMUST00000158375 104 ntBASIC1.59□□□□□ -2.15
Prpf40aQ9R1C7 Gm42533-201ENSMUST00000196247 157 ntBASIC1.59□□□□□ -2.15
Prpf40aQ9R1C7 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
Prpf40aQ9R1C7 Traj42-201ENSMUST00000103700 64 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Gm6985-201ENSMUST00000121255 271 ntBASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Gm24895-201ENSMUST00000122742 74 ntBASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Gm24073-201ENSMUST00000158177 106 ntBASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Mir6342-201ENSMUST00000183870 125 ntBASIC1.58□□□□□ -2.16
Prpf40aQ9R1C7 Gm25495-201ENSMUST00000104431 131 ntBASIC1.57□□□□□ -2.16
Prpf40aQ9R1C7 Gm23558-201ENSMUST00000157823 80 ntBASIC1.57□□□□□ -2.16
Prpf40aQ9R1C7 Gm23293-201ENSMUST00000082552 104 ntBASIC1.57□□□□□ -2.16
Prpf40aQ9R1C7 Gm23766-201ENSMUST00000103894 80 ntBASIC1.56□□□□□ -2.16
Prpf40aQ9R1C7 Snord13-201ENSMUST00000157627 104 ntBASIC1.56□□□□□ -2.16
Prpf40aQ9R1C7 Gm24221-201ENSMUST00000158833 313 ntBASIC1.56□□□□□ -2.16
Prpf40aQ9R1C7 Gm25991-201ENSMUST00000102439 99 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm24983-201ENSMUST00000104457 69 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm23989-201ENSMUST00000117030 66 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm24495-201ENSMUST00000178575 79 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm23714-201ENSMUST00000179259 105 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm22253-201ENSMUST00000179870 79 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm27493-201ENSMUST00000184128 78 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Mir1949-202ENSMUST00000199259 70 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm22652-201ENSMUST00000083207 131 ntBASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Prpf40aQ9R1C7 Gm13065-201ENSMUST00000119178 141 ntBASIC1.54□□□□□ -2.16
Prpf40aQ9R1C7 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Prpf40aQ9R1C7 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Prpf40aQ9R1C7 Gm22559-201ENSMUST00000157329 134 ntBASIC1.53□□□□□ -2.16
Prpf40aQ9R1C7 Snord2-201ENSMUST00000157899 69 ntBASIC1.53□□□□□ -2.16
Prpf40aQ9R1C7 Gm24902-201ENSMUST00000158126 123 ntBASIC1.53□□□□□ -2.16
Prpf40aQ9R1C7 Gm27717-201ENSMUST00000183933 151 ntBASIC1.53□□□□□ -2.16
Prpf40aQ9R1C7 Gm25166-201ENSMUST00000158909 111 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 Gm25831-201ENSMUST00000158924 163 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 Gm22406-201ENSMUST00000174923 93 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 Gm23967-201ENSMUST00000175062 78 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.52□□□□□ -2.17
Prpf40aQ9R1C7 Gm25609-201ENSMUST00000104019 104 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm26499-201ENSMUST00000178544 79 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm26096-201ENSMUST00000179084 79 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Mir8116-201ENSMUST00000184134 97 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm6293-201ENSMUST00000050339 195 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.51□□□□□ -2.17
Prpf40aQ9R1C7 Gm22067-201ENSMUST00000122790 107 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 180.2 ms