Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Mir369-201ENSMUST00000083627 79 ntBASIC0.26□□□□□ -2.37
Ddx56Q9D0R4 Gm25756-201ENSMUST00000103990 136 ntBASIC0.25□□□□□ -2.37
Ddx56Q9D0R4 Gm25496-201ENSMUST00000104430 120 ntBASIC0.25□□□□□ -2.37
Ddx56Q9D0R4 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.25□□□□□ -2.37
Ddx56Q9D0R4 Gm42845-201ENSMUST00000197766 105 ntBASIC0.25□□□□□ -2.37
Ddx56Q9D0R4 Gm23138-201ENSMUST00000083365 103 ntBASIC0.25□□□□□ -2.37
Ddx56Q9D0R4 Gm23434-201ENSMUST00000157179 100 ntBASIC0.24□□□□□ -2.37
Ddx56Q9D0R4 Gm25425-201ENSMUST00000157611 96 ntBASIC0.24□□□□□ -2.37
Ddx56Q9D0R4 Gm24686-201ENSMUST00000157755 93 ntBASIC0.24□□□□□ -2.37
Ddx56Q9D0R4 Gm28001-201ENSMUST00000183561 117 ntBASIC0.24□□□□□ -2.37
Ddx56Q9D0R4 Mir8107-201ENSMUST00000184024 117 ntBASIC0.24□□□□□ -2.37
Ddx56Q9D0R4 Gm25635-201ENSMUST00000082675 131 ntBASIC0.24□□□□□ -2.37
Ddx56Q9D0R4 Gm22319-201ENSMUST00000157147 122 ntBASIC0.23□□□□□ -2.37
Ddx56Q9D0R4 Gm25370-201ENSMUST00000158159 94 ntBASIC0.23□□□□□ -2.37
Ddx56Q9D0R4 Gm22431-201ENSMUST00000158545 107 ntBASIC0.23□□□□□ -2.37
Ddx56Q9D0R4 Gm23821-201ENSMUST00000158738 106 ntBASIC0.23□□□□□ -2.37
Ddx56Q9D0R4 Gm24676-201ENSMUST00000158758 75 ntBASIC0.23□□□□□ -2.37
Ddx56Q9D0R4 Gm25952-201ENSMUST00000175329 74 ntBASIC0.23□□□□□ -2.37
Ddx56Q9D0R4 Gm44803-201ENSMUST00000204384 156 ntBASIC0.23□□□□□ -2.37
Ddx56Q9D0R4 Mir7-1-201ENSMUST00000083500 108 ntBASIC0.23□□□□□ -2.37
Ddx56Q9D0R4 Gm24468-201ENSMUST00000104489 104 ntBASIC0.22□□□□□ -2.37
Ddx56Q9D0R4 Gm22031-201ENSMUST00000116945 126 ntBASIC0.22□□□□□ -2.37
Ddx56Q9D0R4 Gm24894-201ENSMUST00000122744 118 ntBASIC0.22□□□□□ -2.37
Ddx56Q9D0R4 Gm23044-201ENSMUST00000157891 100 ntBASIC0.22□□□□□ -2.37
Ddx56Q9D0R4 Gm23291-201ENSMUST00000175611 78 ntBASIC0.22□□□□□ -2.37
Ddx56Q9D0R4 Snord95-201ENSMUST00000082846 68 ntBASIC0.22□□□□□ -2.37
Ddx56Q9D0R4 Mir18-201ENSMUST00000083469 96 ntBASIC0.22□□□□□ -2.37
Ddx56Q9D0R4 Mir710-201ENSMUST00000102088 110 ntBASIC0.21□□□□□ -2.38
Ddx56Q9D0R4 Gm24167-201ENSMUST00000177733 124 ntBASIC0.21□□□□□ -2.38
Ddx56Q9D0R4 Gm24028-201ENSMUST00000178991 124 ntBASIC0.21□□□□□ -2.38
Ddx56Q9D0R4 Gm24884-201ENSMUST00000158784 119 ntBASIC0.2□□□□□ -2.38
Ddx56Q9D0R4 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.19□□□□□ -2.38
Ddx56Q9D0R4 Gm24916-201ENSMUST00000157287 79 ntBASIC0.19□□□□□ -2.38
Ddx56Q9D0R4 Snord2-201ENSMUST00000157899 69 ntBASIC0.19□□□□□ -2.38
Ddx56Q9D0R4 Mir224-201ENSMUST00000083608 82 ntBASIC0.19□□□□□ -2.38
Ddx56Q9D0R4 Gm23012-201ENSMUST00000104149 83 ntBASIC0.18□□□□□ -2.38
Ddx56Q9D0R4 Gm26712-201ENSMUST00000180813 217 ntBASIC0.18□□□□□ -2.38
Ddx56Q9D0R4 Gm43977-201ENSMUST00000203970 189 ntBASIC0.18□□□□□ -2.38
Ddx56Q9D0R4 Gm22981-201ENSMUST00000082611 75 ntBASIC0.18□□□□□ -2.38
Ddx56Q9D0R4 Gm25753-201ENSMUST00000116792 121 ntBASIC0.17□□□□□ -2.38
Ddx56Q9D0R4 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.17□□□□□ -2.38
Ddx56Q9D0R4 Gm25678-201ENSMUST00000174984 73 ntBASIC0.17□□□□□ -2.38
Ddx56Q9D0R4 Gm25633-201ENSMUST00000178565 107 ntBASIC0.17□□□□□ -2.38
Ddx56Q9D0R4 Gm29047-201ENSMUST00000189816 108 ntBASIC0.17□□□□□ -2.38
Ddx56Q9D0R4 Mir3065-201ENSMUST00000198674 87 ntBASIC0.17□□□□□ -2.38
Ddx56Q9D0R4 Gm27980-201ENSMUST00000184094 169 ntBASIC0.16□□□□□ -2.38
Ddx56Q9D0R4 Gm26454-201ENSMUST00000082682 107 ntBASIC0.16□□□□□ -2.38
Ddx56Q9D0R4 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
Ddx56Q9D0R4 Mir7077-201ENSMUST00000183991 57 ntBASIC0.15□□□□□ -2.39
Ddx56Q9D0R4 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC0.15□□□□□ -2.39
Ddx56Q9D0R4 Gm23783-201ENSMUST00000157941 102 ntBASIC0.14□□□□□ -2.39
Ddx56Q9D0R4 Gm25646-201ENSMUST00000178527 79 ntBASIC0.14□□□□□ -2.39
Ddx56Q9D0R4 Gm24772-201ENSMUST00000158507 110 ntBASIC0.13□□□□□ -2.39
Ddx56Q9D0R4 Gm23966-201ENSMUST00000179823 107 ntBASIC0.13□□□□□ -2.39
Ddx56Q9D0R4 Gm25812-201ENSMUST00000082751 103 ntBASIC0.13□□□□□ -2.39
Ddx56Q9D0R4 Mir7079-201ENSMUST00000184697 69 ntBASIC0.12□□□□□ -2.39
Ddx56Q9D0R4 Gm44328-201ENSMUST00000199331 75 ntBASIC0.12□□□□□ -2.39
Ddx56Q9D0R4 Mir29a-201ENSMUST00000083676 88 ntBASIC0.12□□□□□ -2.39
Ddx56Q9D0R4 Mir1197-201ENSMUST00000117037 120 ntBASIC0.11□□□□□ -2.39
Ddx56Q9D0R4 Gm25920-201ENSMUST00000158307 99 ntBASIC0.11□□□□□ -2.39
Ddx56Q9D0R4 Gm23020-201ENSMUST00000158766 253 ntBASIC0.11□□□□□ -2.39
Ddx56Q9D0R4 Mir6896-201ENSMUST00000198033 73 ntBASIC0.1□□□□□ -2.39
Ddx56Q9D0R4 Gm23060-201ENSMUST00000102345 109 ntBASIC0.09□□□□□ -2.4
Ddx56Q9D0R4 Gm26478-201ENSMUST00000122611 133 ntBASIC0.09□□□□□ -2.4
Ddx56Q9D0R4 Gm25337-201ENSMUST00000083723 104 ntBASIC0.09□□□□□ -2.4
Ddx56Q9D0R4 Gm24555-201ENSMUST00000104548 124 ntBASIC0.08□□□□□ -2.4
Ddx56Q9D0R4 Gm23761-201ENSMUST00000158347 104 ntBASIC0.08□□□□□ -2.4
Ddx56Q9D0R4 AC158982.2-201ENSMUST00000226283 184 ntBASIC0.08□□□□□ -2.4
Ddx56Q9D0R4 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.08□□□□□ -2.4
Ddx56Q9D0R4 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.08□□□□□ -2.4
Ddx56Q9D0R4 Gm23788-201ENSMUST00000122535 106 ntBASIC0.07□□□□□ -2.4
Ddx56Q9D0R4 Gm25889-201ENSMUST00000157775 107 ntBASIC0.07□□□□□ -2.4
Ddx56Q9D0R4 Gm26007-201ENSMUST00000158798 120 ntBASIC0.07□□□□□ -2.4
Ddx56Q9D0R4 Mir509-201ENSMUST00000196089 75 ntBASIC0.07□□□□□ -2.4
Ddx56Q9D0R4 Gm24202-201ENSMUST00000082948 103 ntBASIC0.07□□□□□ -2.4
Ddx56Q9D0R4 Gm22055-201ENSMUST00000083388 107 ntBASIC0.07□□□□□ -2.4
Ddx56Q9D0R4 Gm22368-201ENSMUST00000102416 109 ntBASIC0.06□□□□□ -2.4
Ddx56Q9D0R4 Gm25161-201ENSMUST00000158913 132 ntBASIC0.06□□□□□ -2.4
Ddx56Q9D0R4 Mir363-201ENSMUST00000093598 75 ntBASIC0.06□□□□□ -2.4
Ddx56Q9D0R4 Gm25428-201ENSMUST00000157608 114 ntBASIC0.05□□□□□ -2.4
Ddx56Q9D0R4 Gm22203-201ENSMUST00000158605 58 ntBASIC0.05□□□□□ -2.4
Ddx56Q9D0R4 Mir3967-201ENSMUST00000198710 68 ntBASIC0.05□□□□□ -2.4
Ddx56Q9D0R4 AC125190.3-201ENSMUST00000223224 121 ntBASIC0.05□□□□□ -2.4
Ddx56Q9D0R4 Gm24796-201ENSMUST00000104007 107 ntBASIC0.04□□□□□ -2.4
Ddx56Q9D0R4 Gm25791-201ENSMUST00000083292 137 ntBASIC0.04□□□□□ -2.4
Ddx56Q9D0R4 Gm24288-201ENSMUST00000157630 144 ntBASIC0.03□□□□□ -2.4
Ddx56Q9D0R4 Gm25656-201ENSMUST00000158466 66 ntBASIC0.03□□□□□ -2.4
Ddx56Q9D0R4 Mir6237-201ENSMUST00000183808 91 ntBASIC0.03□□□□□ -2.4
Ddx56Q9D0R4 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.03□□□□□ -2.4
Ddx56Q9D0R4 Gm25787-201ENSMUST00000104709 92 ntBASIC0.02□□□□□ -2.41
Ddx56Q9D0R4 AC140930.2-201ENSMUST00000221803 109 ntBASIC0.02□□□□□ -2.41
Ddx56Q9D0R4 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.02□□□□□ -2.41
Ddx56Q9D0R4 Gm25098-201ENSMUST00000177580 79 ntBASIC0.01□□□□□ -2.41
Ddx56Q9D0R4 Gm23356-201ENSMUST00000177610 79 ntBASIC0.01□□□□□ -2.41
Ddx56Q9D0R4 Gm24027-201ENSMUST00000177611 79 ntBASIC0.01□□□□□ -2.41
Ddx56Q9D0R4 Gm22511-201ENSMUST00000177628 79 ntBASIC0.01□□□□□ -2.41
Ddx56Q9D0R4 Gm22630-201ENSMUST00000177781 79 ntBASIC0.01□□□□□ -2.41
Ddx56Q9D0R4 Gm23560-201ENSMUST00000177782 79 ntBASIC0.01□□□□□ -2.41
Ddx56Q9D0R4 Gm25462-201ENSMUST00000177833 79 ntBASIC0.01□□□□□ -2.41
Ddx56Q9D0R4 Gm26059-201ENSMUST00000177865 79 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 152.6 ms