Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm25952-201ENSMUST00000175329 74 ntBASIC0.15□□□□□ -2.39
Ddx28Q9CWT6 Gm23344-201ENSMUST00000083818 68 ntBASIC0.15□□□□□ -2.39
Ddx28Q9CWT6 Gm23347-201ENSMUST00000083823 82 ntBASIC0.15□□□□□ -2.39
Ddx28Q9CWT6 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.14□□□□□ -2.39
Ddx28Q9CWT6 Gm43907-201ENSMUST00000203128 117 ntBASIC0.14□□□□□ -2.39
Ddx28Q9CWT6 Gm44803-201ENSMUST00000204384 156 ntBASIC0.14□□□□□ -2.39
Ddx28Q9CWT6 Gm45429-201ENSMUST00000209527 172 ntBASIC0.14□□□□□ -2.39
Ddx28Q9CWT6 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.14□□□□□ -2.39
Ddx28Q9CWT6 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.13□□□□□ -2.39
Ddx28Q9CWT6 Gm22842-201ENSMUST00000157709 118 ntBASIC0.13□□□□□ -2.39
Ddx28Q9CWT6 Gm22503-201ENSMUST00000158983 115 ntBASIC0.13□□□□□ -2.39
Ddx28Q9CWT6 Mir6896-201ENSMUST00000198033 73 ntBASIC0.13□□□□□ -2.39
Ddx28Q9CWT6 Gm23140-201ENSMUST00000082487 107 ntBASIC0.13□□□□□ -2.39
Ddx28Q9CWT6 Gm24686-201ENSMUST00000157755 93 ntBASIC0.12□□□□□ -2.39
Ddx28Q9CWT6 Gm25887-201ENSMUST00000157777 84 ntBASIC0.12□□□□□ -2.39
Ddx28Q9CWT6 Gm24947-201ENSMUST00000158334 110 ntBASIC0.12□□□□□ -2.39
Ddx28Q9CWT6 Gm23350-201ENSMUST00000158429 103 ntBASIC0.12□□□□□ -2.39
Ddx28Q9CWT6 Gm24884-201ENSMUST00000158784 119 ntBASIC0.12□□□□□ -2.39
Ddx28Q9CWT6 Gm22509-201ENSMUST00000082775 107 ntBASIC0.12□□□□□ -2.39
Ddx28Q9CWT6 Gm22212-201ENSMUST00000158096 106 ntBASIC0.11□□□□□ -2.39
Ddx28Q9CWT6 Gm22384-201ENSMUST00000158187 104 ntBASIC0.11□□□□□ -2.39
Ddx28Q9CWT6 Gm23065-201ENSMUST00000158236 130 ntBASIC0.11□□□□□ -2.39
Ddx28Q9CWT6 Gm22981-201ENSMUST00000082611 75 ntBASIC0.11□□□□□ -2.39
Ddx28Q9CWT6 Mir18-201ENSMUST00000083469 96 ntBASIC0.11□□□□□ -2.39
Ddx28Q9CWT6 Gm25915-201ENSMUST00000104265 126 ntBASIC0.1□□□□□ -2.39
Ddx28Q9CWT6 Gm25370-201ENSMUST00000158159 94 ntBASIC0.1□□□□□ -2.39
Ddx28Q9CWT6 Gm25366-201ENSMUST00000158845 124 ntBASIC0.1□□□□□ -2.39
Ddx28Q9CWT6 Gm23291-201ENSMUST00000175611 78 ntBASIC0.1□□□□□ -2.39
Ddx28Q9CWT6 Gm43324-201ENSMUST00000197482 289 ntBASIC0.1□□□□□ -2.39
Ddx28Q9CWT6 Mir3065-201ENSMUST00000198674 87 ntBASIC0.1□□□□□ -2.39
Ddx28Q9CWT6 Gm25375-201ENSMUST00000158157 135 ntBASIC0.09□□□□□ -2.4
Ddx28Q9CWT6 Gm23761-201ENSMUST00000158347 104 ntBASIC0.09□□□□□ -2.4
Ddx28Q9CWT6 Gm23678-201ENSMUST00000083157 107 ntBASIC0.09□□□□□ -2.4
Ddx28Q9CWT6 Gm25756-201ENSMUST00000103990 136 ntBASIC0.08□□□□□ -2.4
Ddx28Q9CWT6 Gm23012-201ENSMUST00000104149 83 ntBASIC0.08□□□□□ -2.4
Ddx28Q9CWT6 Gm23434-201ENSMUST00000157179 100 ntBASIC0.08□□□□□ -2.4
Ddx28Q9CWT6 Gm25425-201ENSMUST00000157611 96 ntBASIC0.08□□□□□ -2.4
Ddx28Q9CWT6 Gm22340-201ENSMUST00000157717 114 ntBASIC0.08□□□□□ -2.4
Ddx28Q9CWT6 Snord2-201ENSMUST00000157899 69 ntBASIC0.08□□□□□ -2.4
Ddx28Q9CWT6 Gm25247-201ENSMUST00000175475 90 ntBASIC0.08□□□□□ -2.4
Ddx28Q9CWT6 Gm29047-201ENSMUST00000189816 108 ntBASIC0.08□□□□□ -2.4
Ddx28Q9CWT6 Gm42845-201ENSMUST00000197766 105 ntBASIC0.08□□□□□ -2.4
Ddx28Q9CWT6 Gm12086-201ENSMUST00000120863 228 ntBASIC0.07□□□□□ -2.4
Ddx28Q9CWT6 Gm22319-201ENSMUST00000157147 122 ntBASIC0.07□□□□□ -2.4
Ddx28Q9CWT6 Gm25635-201ENSMUST00000082675 131 ntBASIC0.07□□□□□ -2.4
Ddx28Q9CWT6 Gm23531-201ENSMUST00000104567 68 ntBASIC0.06□□□□□ -2.4
Ddx28Q9CWT6 Gm24894-201ENSMUST00000122744 118 ntBASIC0.06□□□□□ -2.4
Ddx28Q9CWT6 Gm25161-201ENSMUST00000158913 132 ntBASIC0.06□□□□□ -2.4
Ddx28Q9CWT6 Gm44328-201ENSMUST00000199331 75 ntBASIC0.06□□□□□ -2.4
Ddx28Q9CWT6 Gm24468-201ENSMUST00000104489 104 ntBASIC0.05□□□□□ -2.4
Ddx28Q9CWT6 Gm43977-201ENSMUST00000203970 189 ntBASIC0.05□□□□□ -2.4
Ddx28Q9CWT6 Snord95-201ENSMUST00000082846 68 ntBASIC0.05□□□□□ -2.4
Ddx28Q9CWT6 Gm24916-201ENSMUST00000157287 79 ntBASIC0.04□□□□□ -2.4
Ddx28Q9CWT6 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.04□□□□□ -2.4
Ddx28Q9CWT6 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.04□□□□□ -2.4
Ddx28Q9CWT6 Gm22368-201ENSMUST00000102416 109 ntBASIC0.03□□□□□ -2.4
Ddx28Q9CWT6 Gm23788-201ENSMUST00000122535 106 ntBASIC0.03□□□□□ -2.4
Ddx28Q9CWT6 Gm22088-201ENSMUST00000158341 117 ntBASIC0.03□□□□□ -2.4
Ddx28Q9CWT6 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
Ddx28Q9CWT6 Gm26712-201ENSMUST00000180813 217 ntBASIC0.03□□□□□ -2.4
Ddx28Q9CWT6 Gm24926-201ENSMUST00000178053 79 ntBASIC0.02□□□□□ -2.41
Ddx28Q9CWT6 Gm22632-201ENSMUST00000178266 79 ntBASIC0.02□□□□□ -2.41
Ddx28Q9CWT6 Mir7-1-201ENSMUST00000083500 108 ntBASIC0.02□□□□□ -2.41
Ddx28Q9CWT6 Gm22031-201ENSMUST00000116945 126 ntBASIC0.01□□□□□ -2.41
Ddx28Q9CWT6 Gm24676-201ENSMUST00000158758 75 ntBASIC0.01□□□□□ -2.41
Ddx28Q9CWT6 Gm23020-201ENSMUST00000158766 253 ntBASIC0.01□□□□□ -2.41
Ddx28Q9CWT6 Mir509-201ENSMUST00000196089 75 ntBASIC0.01□□□□□ -2.41
Ddx28Q9CWT6 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.01□□□□□ -2.41
Ddx28Q9CWT6 Gm25703-201ENSMUST00000083123 151 ntBASIC0.01□□□□□ -2.41
Ddx28Q9CWT6 Gm23044-201ENSMUST00000157891 100 ntBASIC0□□□□□ -2.41
Ddx28Q9CWT6 Gm26007-201ENSMUST00000158798 120 ntBASIC0□□□□□ -2.41
Ddx28Q9CWT6 Gm45617-201ENSMUST00000211132 209 ntBASIC0□□□□□ -2.41
Ddx28Q9CWT6 Mir369-201ENSMUST00000083627 79 ntBASIC0□□□□□ -2.41
Ddx28Q9CWT6 Gm24445-201ENSMUST00000083981 107 ntBASIC0□□□□□ -2.41
Ddx28Q9CWT6 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.01□□□□□ -2.41
Ddx28Q9CWT6 Gm25889-201ENSMUST00000157775 107 ntBASIC-0.01□□□□□ -2.41
Ddx28Q9CWT6 Mir29a-201ENSMUST00000083676 88 ntBASIC-0.01□□□□□ -2.41
Ddx28Q9CWT6 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.02□□□□□ -2.41
Ddx28Q9CWT6 Gm25646-201ENSMUST00000178527 79 ntBASIC-0.02□□□□□ -2.41
Ddx28Q9CWT6 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.02□□□□□ -2.41
Ddx28Q9CWT6 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.02□□□□□ -2.41
Ddx28Q9CWT6 Gm24202-201ENSMUST00000082948 103 ntBASIC-0.02□□□□□ -2.41
Ddx28Q9CWT6 Gm25791-201ENSMUST00000083292 137 ntBASIC-0.02□□□□□ -2.41
Ddx28Q9CWT6 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.03□□□□□ -2.41
Ddx28Q9CWT6 Gm25753-201ENSMUST00000116792 121 ntBASIC-0.03□□□□□ -2.41
Ddx28Q9CWT6 Gm23994-201ENSMUST00000158059 88 ntBASIC-0.03□□□□□ -2.41
Ddx28Q9CWT6 Gm23180-201ENSMUST00000158686 125 ntBASIC-0.03□□□□□ -2.41
Ddx28Q9CWT6 Gm25678-201ENSMUST00000174984 73 ntBASIC-0.03□□□□□ -2.41
Ddx28Q9CWT6 Mir3089-201ENSMUST00000175350 84 ntBASIC-0.03□□□□□ -2.41
Ddx28Q9CWT6 Snord85-201ENSMUST00000083262 73 ntBASIC-0.03□□□□□ -2.41
Ddx28Q9CWT6 Gm25656-201ENSMUST00000158466 66 ntBASIC-0.04□□□□□ -2.42
Ddx28Q9CWT6 Gm24167-201ENSMUST00000177733 124 ntBASIC-0.04□□□□□ -2.42
Ddx28Q9CWT6 Gm24028-201ENSMUST00000178991 124 ntBASIC-0.04□□□□□ -2.42
Ddx28Q9CWT6 Mir3967-201ENSMUST00000198710 68 ntBASIC-0.04□□□□□ -2.42
Ddx28Q9CWT6 Gm26454-201ENSMUST00000082682 107 ntBASIC-0.04□□□□□ -2.42
Ddx28Q9CWT6 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
Ddx28Q9CWT6 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.05□□□□□ -2.42
Ddx28Q9CWT6 Gm26478-201ENSMUST00000122611 133 ntBASIC-0.05□□□□□ -2.42
Ddx28Q9CWT6 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.05□□□□□ -2.42
Ddx28Q9CWT6 Gm27607-201ENSMUST00000185162 122 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 183.6 ms