Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm22699-201ENSMUST00000175376 105 ntBASIC-0.85□□□□□ -2.55
Ccdc43Q9CR29 mt-Tw-201ENSMUST00000082397 67 ntBASIC-0.85□□□□□ -2.55
Ccdc43Q9CR29 Snord49b-201ENSMUST00000082503 72 ntBASIC-0.85□□□□□ -2.55
Ccdc43Q9CR29 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.85□□□□□ -2.55
Ccdc43Q9CR29 Gm23970-201ENSMUST00000083319 107 ntBASIC-0.85□□□□□ -2.55
Ccdc43Q9CR29 Gm24649-201ENSMUST00000157106 134 ntBASIC-0.86□□□□□ -2.55
Ccdc43Q9CR29 Gm23209-201ENSMUST00000158667 110 ntBASIC-0.86□□□□□ -2.55
Ccdc43Q9CR29 AC168880.2-201ENSMUST00000224488 201 ntBASIC-0.86□□□□□ -2.55
Ccdc43Q9CR29 mt-Ts2-201ENSMUST00000082416 59 ntBASIC-0.86□□□□□ -2.55
Ccdc43Q9CR29 Gm25091-201ENSMUST00000103997 71 ntBASIC-0.87□□□□□ -2.55
Ccdc43Q9CR29 Gm11116-201ENSMUST00000113257 54 ntAPPRIS P1 TSL 5 BASIC-0.87□□□□□ -2.55
Ccdc43Q9CR29 Gm24913-201ENSMUST00000157286 107 ntBASIC-0.87□□□□□ -2.55
Ccdc43Q9CR29 Gm25618-201ENSMUST00000179484 107 ntBASIC-0.87□□□□□ -2.55
Ccdc43Q9CR29 Gm24508-201ENSMUST00000180104 107 ntBASIC-0.87□□□□□ -2.55
Ccdc43Q9CR29 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.88□□□□□ -2.55
Ccdc43Q9CR29 Gm25367-201ENSMUST00000158846 106 ntBASIC-0.88□□□□□ -2.55
Ccdc43Q9CR29 Gm23056-201ENSMUST00000082803 111 ntBASIC-0.88□□□□□ -2.55
Ccdc43Q9CR29 Gm22337-201ENSMUST00000157721 132 ntBASIC-0.89□□□□□ -2.55
Ccdc43Q9CR29 Gm23351-201ENSMUST00000158427 125 ntBASIC-0.89□□□□□ -2.55
Ccdc43Q9CR29 Gm25716-201ENSMUST00000158628 104 ntBASIC-0.89□□□□□ -2.55
Ccdc43Q9CR29 AC126939.1-201ENSMUST00000224943 226 ntBASIC-0.89□□□□□ -2.55
Ccdc43Q9CR29 Snora16a-201ENSMUST00000083163 136 ntBASIC-0.89□□□□□ -2.55
Ccdc43Q9CR29 Gm26168-201ENSMUST00000083787 112 ntBASIC-0.89□□□□□ -2.55
Ccdc43Q9CR29 Snora26-201ENSMUST00000175614 121 ntBASIC-0.9□□□□□ -2.55
Ccdc43Q9CR29 Gm27699-201ENSMUST00000183553 180 ntBASIC-0.91□□□□□ -2.56
Ccdc43Q9CR29 Gm25296-201ENSMUST00000082566 67 ntBASIC-0.91□□□□□ -2.56
Ccdc43Q9CR29 Gm26084-201ENSMUST00000157903 104 ntBASIC-0.92□□□□□ -2.56
Ccdc43Q9CR29 Gm22212-201ENSMUST00000158096 106 ntBASIC-0.92□□□□□ -2.56
Ccdc43Q9CR29 Gm22203-201ENSMUST00000158605 58 ntBASIC-0.92□□□□□ -2.56
Ccdc43Q9CR29 Gm22455-201ENSMUST00000082580 71 ntBASIC-0.92□□□□□ -2.56
Ccdc43Q9CR29 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.93□□□□□ -2.56
Ccdc43Q9CR29 Gm25388-201ENSMUST00000157339 151 ntBASIC-0.93□□□□□ -2.56
Ccdc43Q9CR29 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.93□□□□□ -2.56
Ccdc43Q9CR29 Gm18502-201ENSMUST00000218679 199 ntBASIC-0.93□□□□□ -2.56
Ccdc43Q9CR29 Gm24455-201ENSMUST00000083348 131 ntBASIC-0.93□□□□□ -2.56
Ccdc43Q9CR29 Gm23344-201ENSMUST00000083818 68 ntBASIC-0.93□□□□□ -2.56
Ccdc43Q9CR29 Gm24468-201ENSMUST00000104489 104 ntBASIC-0.94□□□□□ -2.56
Ccdc43Q9CR29 Gm24381-201ENSMUST00000122697 104 ntBASIC-0.94□□□□□ -2.56
Ccdc43Q9CR29 Gm23986-201ENSMUST00000157144 63 ntBASIC-0.94□□□□□ -2.56
Ccdc43Q9CR29 Gm25599-201ENSMUST00000157816 103 ntBASIC-0.94□□□□□ -2.56
Ccdc43Q9CR29 Mirlet7d-201ENSMUST00000083519 103 ntBASIC-0.94□□□□□ -2.56
Ccdc43Q9CR29 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.95□□□□□ -2.56
Ccdc43Q9CR29 Gm25635-201ENSMUST00000082675 131 ntBASIC-0.95□□□□□ -2.56
Ccdc43Q9CR29 Gm14533-201ENSMUST00000117088 93 ntBASIC-0.96□□□□□ -2.56
Ccdc43Q9CR29 Gm25186-201ENSMUST00000083909 108 ntBASIC-0.96□□□□□ -2.56
Ccdc43Q9CR29 Mir669h-201ENSMUST00000116944 125 ntBASIC-0.97□□□□□ -2.56
Ccdc43Q9CR29 Gm26359-201ENSMUST00000158873 101 ntBASIC-0.97□□□□□ -2.56
Ccdc43Q9CR29 Gm8034-201ENSMUST00000178853 132 ntBASIC-0.97□□□□□ -2.56
Ccdc43Q9CR29 Gm24202-201ENSMUST00000082948 103 ntBASIC-0.97□□□□□ -2.56
Ccdc43Q9CR29 Gm22336-201ENSMUST00000157719 107 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Gm22258-201ENSMUST00000177645 94 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Gm26032-201ENSMUST00000178535 94 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Gm25210-201ENSMUST00000178813 94 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Gm25157-201ENSMUST00000178914 94 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Gm22046-201ENSMUST00000179027 94 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Gm22941-201ENSMUST00000179630 94 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Gm25471-201ENSMUST00000180126 94 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Mir509-201ENSMUST00000196089 75 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Gm25081-201ENSMUST00000082534 108 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Mir29a-201ENSMUST00000083676 88 ntBASIC-0.98□□□□□ -2.57
Ccdc43Q9CR29 Gm22772-201ENSMUST00000104451 121 ntBASIC-0.99□□□□□ -2.57
Ccdc43Q9CR29 Gm22406-201ENSMUST00000174923 93 ntBASIC-1□□□□□ -2.57
Ccdc43Q9CR29 Gm27884-201ENSMUST00000183865 76 ntBASIC-1□□□□□ -2.57
Ccdc43Q9CR29 Gm25275-201ENSMUST00000104297 129 ntBASIC-1.01□□□□□ -2.57
Ccdc43Q9CR29 Gm23990-201ENSMUST00000117031 117 ntBASIC-1.01□□□□□ -2.57
Ccdc43Q9CR29 Gm23065-201ENSMUST00000158236 130 ntBASIC-1.01□□□□□ -2.57
Ccdc43Q9CR29 Gm23197-201ENSMUST00000158809 112 ntBASIC-1.01□□□□□ -2.57
Ccdc43Q9CR29 Gm22708-201ENSMUST00000158987 103 ntBASIC-1.01□□□□□ -2.57
Ccdc43Q9CR29 Mir344h-1-201ENSMUST00000174922 60 ntBASIC-1.01□□□□□ -2.57
Ccdc43Q9CR29 Mir344h-2-201ENSMUST00000175612 60 ntBASIC-1.01□□□□□ -2.57
Ccdc43Q9CR29 Snord80-201ENSMUST00000083801 81 ntBASIC-1.01□□□□□ -2.57
Ccdc43Q9CR29 Gm22503-201ENSMUST00000158983 115 ntBASIC-1.02□□□□□ -2.57
Ccdc43Q9CR29 Mir669b-201ENSMUST00000102172 97 ntBASIC-1.03□□□□□ -2.57
Ccdc43Q9CR29 Gm23239-201ENSMUST00000083006 181 ntBASIC-1.03□□□□□ -2.57
Ccdc43Q9CR29 Mir6904-201ENSMUST00000183443 67 ntBASIC-1.04□□□□□ -2.58
Ccdc43Q9CR29 Mir183-201ENSMUST00000083685 70 ntBASIC-1.04□□□□□ -2.58
Ccdc43Q9CR29 Gm26081-201ENSMUST00000104068 132 ntBASIC-1.05□□□□□ -2.58
Ccdc43Q9CR29 Gm26478-201ENSMUST00000122611 133 ntBASIC-1.05□□□□□ -2.58
Ccdc43Q9CR29 AC157602.1-201ENSMUST00000197446 105 ntBASIC-1.05□□□□□ -2.58
Ccdc43Q9CR29 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-1.05□□□□□ -2.58
Ccdc43Q9CR29 AC151902.2-201ENSMUST00000226419 301 ntBASIC-1.05□□□□□ -2.58
Ccdc43Q9CR29 Gm25472-201ENSMUST00000175454 78 ntBASIC-1.06□□□□□ -2.58
Ccdc43Q9CR29 Gm27851-201ENSMUST00000183529 63 ntBASIC-1.06□□□□□ -2.58
Ccdc43Q9CR29 Gm39149-201ENSMUST00000210258 186 ntTSL 5 BASIC-1.06□□□□□ -2.58
Ccdc43Q9CR29 Gm25510-201ENSMUST00000116986 123 ntBASIC-1.07□□□□□ -2.58
Ccdc43Q9CR29 Gm24593-201ENSMUST00000122507 106 ntBASIC-1.07□□□□□ -2.58
Ccdc43Q9CR29 Gm26498-201ENSMUST00000177799 79 ntBASIC-1.07□□□□□ -2.58
Ccdc43Q9CR29 Gm22638-201ENSMUST00000179674 107 ntBASIC-1.07□□□□□ -2.58
Ccdc43Q9CR29 Gm26230-201ENSMUST00000180141 79 ntBASIC-1.07□□□□□ -2.58
Ccdc43Q9CR29 Gm37796-201ENSMUST00000195327 134 ntBASIC-1.07□□□□□ -2.58
Ccdc43Q9CR29 Mir96-201ENSMUST00000083652 106 ntBASIC-1.07□□□□□ -2.58
Ccdc43Q9CR29 Gm24877-201ENSMUST00000158779 116 ntBASIC-1.08□□□□□ -2.58
Ccdc43Q9CR29 Gm28724-201ENSMUST00000186149 625 ntBASIC-1.08□□□□□ -2.58
Ccdc43Q9CR29 Gm42677-201ENSMUST00000196363 127 ntBASIC-1.08□□□□□ -2.58
Ccdc43Q9CR29 Gm25137-201ENSMUST00000083251 110 ntBASIC-1.08□□□□□ -2.58
Ccdc43Q9CR29 Mir103-1-201ENSMUST00000083619 86 ntBASIC-1.08□□□□□ -2.58
Ccdc43Q9CR29 Gm24894-201ENSMUST00000122744 118 ntBASIC-1.09□□□□□ -2.58
Ccdc43Q9CR29 Gm27694-201ENSMUST00000184740 86 ntBASIC-1.09□□□□□ -2.58
Ccdc43Q9CR29 AC129019.2-201ENSMUST00000222063 202 ntBASIC-1.09□□□□□ -2.58
Ccdc43Q9CR29 Gm24457-201ENSMUST00000083196 105 ntBASIC-1.09□□□□□ -2.58
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms