Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gm28143-201ENSMUST00000191082 109 ntBASIC0.86□□□□□ -2.27
Pcdha9Q91Y11 Gm25300-201ENSMUST00000175284 84 ntBASIC0.85□□□□□ -2.27
Pcdha9Q91Y11 Gm38295-201ENSMUST00000191951 151 ntBASIC0.85□□□□□ -2.27
Pcdha9Q91Y11 Gm6985-201ENSMUST00000121255 271 ntBASIC0.84□□□□□ -2.27
Pcdha9Q91Y11 Gm22520-201ENSMUST00000158269 129 ntBASIC0.84□□□□□ -2.27
Pcdha9Q91Y11 Mir7010-201ENSMUST00000183464 63 ntBASIC0.84□□□□□ -2.27
Pcdha9Q91Y11 Gm27656-201ENSMUST00000185055 80 ntBASIC0.84□□□□□ -2.27
Pcdha9Q91Y11 AC140930.2-201ENSMUST00000221803 109 ntBASIC0.84□□□□□ -2.27
Pcdha9Q91Y11 Gm25337-201ENSMUST00000083723 104 ntBASIC0.84□□□□□ -2.27
Pcdha9Q91Y11 Gm26109-201ENSMUST00000083970 70 ntBASIC0.84□□□□□ -2.27
Pcdha9Q91Y11 Gm24686-201ENSMUST00000157755 93 ntBASIC0.83□□□□□ -2.28
Pcdha9Q91Y11 Mir1949-202ENSMUST00000199259 70 ntBASIC0.83□□□□□ -2.28
Pcdha9Q91Y11 AC166341.8-201ENSMUST00000221267 108 ntBASIC0.83□□□□□ -2.28
Pcdha9Q91Y11 Gm22689-201ENSMUST00000102452 110 ntBASIC0.82□□□□□ -2.28
Pcdha9Q91Y11 Gm25040-201ENSMUST00000103877 66 ntBASIC0.82□□□□□ -2.28
Pcdha9Q91Y11 Gm23340-201ENSMUST00000158955 123 ntBASIC0.82□□□□□ -2.28
Pcdha9Q91Y11 Gm23735-201ENSMUST00000082551 134 ntBASIC0.82□□□□□ -2.28
Pcdha9Q91Y11 Snord33-201ENSMUST00000083694 84 ntBASIC0.82□□□□□ -2.28
Pcdha9Q91Y11 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 Gm25170-201ENSMUST00000104191 129 ntBASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 Gm23991-201ENSMUST00000117033 93 ntBASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 Gm20386-201ENSMUST00000174010 132 ntBASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 Mir6237-201ENSMUST00000183808 91 ntBASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 Mir376b-201ENSMUST00000195930 82 ntBASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 AC160962.3-201ENSMUST00000225914 112 ntBASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 Gm24208-201ENSMUST00000082783 135 ntBASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 Snora75-201ENSMUST00000082903 133 ntBASIC0.81□□□□□ -2.28
Pcdha9Q91Y11 Gm22788-201ENSMUST00000157876 61 ntBASIC0.8□□□□□ -2.28
Pcdha9Q91Y11 Gm22212-201ENSMUST00000158096 106 ntBASIC0.8□□□□□ -2.28
Pcdha9Q91Y11 Gm23197-201ENSMUST00000158809 112 ntBASIC0.8□□□□□ -2.28
Pcdha9Q91Y11 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.8□□□□□ -2.28
Pcdha9Q91Y11 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.8□□□□□ -2.28
Pcdha9Q91Y11 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.8□□□□□ -2.28
Pcdha9Q91Y11 Snora2b-201ENSMUST00000084005 137 ntBASIC0.8□□□□□ -2.28
Pcdha9Q91Y11 Mir362-201ENSMUST00000093592 65 ntBASIC0.8□□□□□ -2.28
Pcdha9Q91Y11 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC0.8□□□□□ -2.28
Pcdha9Q91Y11 Gm24648-201ENSMUST00000157111 132 ntBASIC0.79□□□□□ -2.28
Pcdha9Q91Y11 Gm27289-201ENSMUST00000183341 82 ntBASIC0.79□□□□□ -2.28
Pcdha9Q91Y11 Gm13065-201ENSMUST00000119178 141 ntBASIC0.78□□□□□ -2.28
Pcdha9Q91Y11 Gm26253-201ENSMUST00000122493 103 ntBASIC0.78□□□□□ -2.28
Pcdha9Q91Y11 Gm25393-201ENSMUST00000157336 285 ntBASIC0.78□□□□□ -2.28
Pcdha9Q91Y11 Gm38113-201ENSMUST00000193704 201 ntBASIC0.78□□□□□ -2.28
Pcdha9Q91Y11 Gm24579-201ENSMUST00000103964 144 ntBASIC0.77□□□□□ -2.29
Pcdha9Q91Y11 Gm25378-201ENSMUST00000104333 129 ntBASIC0.77□□□□□ -2.29
Pcdha9Q91Y11 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.77□□□□□ -2.29
Pcdha9Q91Y11 Mir3109-201ENSMUST00000175301 88 ntBASIC0.77□□□□□ -2.29
Pcdha9Q91Y11 Mir6364-201ENSMUST00000183396 86 ntBASIC0.77□□□□□ -2.29
Pcdha9Q91Y11 AC132833.2-201ENSMUST00000228699 157 ntBASIC0.77□□□□□ -2.29
Pcdha9Q91Y11 Gm24099-201ENSMUST00000083384 107 ntBASIC0.77□□□□□ -2.29
Pcdha9Q91Y11 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.76□□□□□ -2.29
Pcdha9Q91Y11 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
Pcdha9Q91Y11 Gm24233-201ENSMUST00000104317 122 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 Snord71-201ENSMUST00000104361 85 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 Gm24073-201ENSMUST00000158177 106 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 Gm22770-201ENSMUST00000158368 67 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 Gm24801-201ENSMUST00000178503 105 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 Gm26712-201ENSMUST00000180813 217 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 Mir8116-201ENSMUST00000184134 97 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 Gm25894-201ENSMUST00000083458 75 ntBASIC0.75□□□□□ -2.29
Pcdha9Q91Y11 Gm23203-201ENSMUST00000104374 107 ntBASIC0.74□□□□□ -2.29
Pcdha9Q91Y11 Gm23410-201ENSMUST00000179967 107 ntBASIC0.74□□□□□ -2.29
Pcdha9Q91Y11 Gm22505-201ENSMUST00000082956 108 ntBASIC0.74□□□□□ -2.29
Pcdha9Q91Y11 Gm22363-201ENSMUST00000083100 108 ntBASIC0.74□□□□□ -2.29
Pcdha9Q91Y11 Gm23814-201ENSMUST00000083230 102 ntBASIC0.74□□□□□ -2.29
Pcdha9Q91Y11 Gm23244-201ENSMUST00000083375 92 ntBASIC0.74□□□□□ -2.29
Pcdha9Q91Y11 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
Pcdha9Q91Y11 Gm22672-201ENSMUST00000104414 134 ntBASIC0.73□□□□□ -2.29
Pcdha9Q91Y11 Gm22565-201ENSMUST00000175540 69 ntBASIC0.73□□□□□ -2.29
Pcdha9Q91Y11 Gm27717-201ENSMUST00000183933 151 ntBASIC0.73□□□□□ -2.29
Pcdha9Q91Y11 Mir6394-201ENSMUST00000184738 99 ntBASIC0.73□□□□□ -2.29
Pcdha9Q91Y11 Gm42506-201ENSMUST00000202009 150 ntBASIC0.73□□□□□ -2.29
Pcdha9Q91Y11 Gm43927-201ENSMUST00000204599 117 ntBASIC0.73□□□□□ -2.29
Pcdha9Q91Y11 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.73□□□□□ -2.29
Pcdha9Q91Y11 Gm22652-201ENSMUST00000083207 131 ntBASIC0.73□□□□□ -2.29
Pcdha9Q91Y11 Mir450b-201ENSMUST00000102095 82 ntBASIC0.72□□□□□ -2.29
Pcdha9Q91Y11 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.72□□□□□ -2.29
Pcdha9Q91Y11 Gm43907-201ENSMUST00000203128 117 ntBASIC0.72□□□□□ -2.29
Pcdha9Q91Y11 Mir29a-201ENSMUST00000083676 88 ntBASIC0.72□□□□□ -2.29
Pcdha9Q91Y11 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Pcdha9Q91Y11 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Pcdha9Q91Y11 Gm25416-201ENSMUST00000104221 107 ntBASIC0.71□□□□□ -2.3
Pcdha9Q91Y11 Gm24321-201ENSMUST00000175348 80 ntBASIC0.71□□□□□ -2.3
Pcdha9Q91Y11 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.71□□□□□ -2.3
Pcdha9Q91Y11 Mir10b-201ENSMUST00000083566 68 ntBASIC0.71□□□□□ -2.3
Pcdha9Q91Y11 Mir509-201ENSMUST00000196089 75 ntBASIC0.7□□□□□ -2.3
Pcdha9Q91Y11 Gm44458-201ENSMUST00000196594 143 ntBASIC0.7□□□□□ -2.3
Pcdha9Q91Y11 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.7□□□□□ -2.3
Pcdha9Q91Y11 Mir448-201ENSMUST00000083516 112 ntBASIC0.7□□□□□ -2.3
Pcdha9Q91Y11 Gm22469-201ENSMUST00000104118 133 ntBASIC0.69□□□□□ -2.3
Pcdha9Q91Y11 Gm23708-201ENSMUST00000104367 123 ntBASIC0.69□□□□□ -2.3
Pcdha9Q91Y11 Gm16265-201ENSMUST00000134558 108 ntBASIC0.69□□□□□ -2.3
Pcdha9Q91Y11 Gm23261-201ENSMUST00000158316 136 ntBASIC0.69□□□□□ -2.3
Pcdha9Q91Y11 Gm23291-201ENSMUST00000175611 78 ntBASIC0.69□□□□□ -2.3
Pcdha9Q91Y11 Gm44455-201ENSMUST00000200061 82 ntBASIC0.69□□□□□ -2.3
Pcdha9Q91Y11 Gm22149-201ENSMUST00000104442 136 ntBASIC0.68□□□□□ -2.3
Pcdha9Q91Y11 Gm26478-201ENSMUST00000122611 133 ntBASIC0.68□□□□□ -2.3
Pcdha9Q91Y11 Gm22845-201ENSMUST00000157712 104 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 134.5 ms