Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm24555-201ENSMUST00000104548 124 ntBASIC2.72□□□□□ -1.97
Trim35Q8C006 Gm26341-201ENSMUST00000104561 134 ntBASIC2.72□□□□□ -1.97
Trim35Q8C006 Gm24879-201ENSMUST00000158386 143 ntBASIC2.72□□□□□ -1.97
Trim35Q8C006 Gm23268-201ENSMUST00000175494 78 ntBASIC2.72□□□□□ -1.97
Trim35Q8C006 Snord93-201ENSMUST00000175580 71 ntBASIC2.72□□□□□ -1.97
Trim35Q8C006 Mir125b-1-201ENSMUST00000175613 77 ntBASIC2.72□□□□□ -1.97
Trim35Q8C006 Gm23017-201ENSMUST00000177583 72 ntBASIC2.72□□□□□ -1.97
Trim35Q8C006 Mir7242-201ENSMUST00000183710 79 ntBASIC2.72□□□□□ -1.97
Trim35Q8C006 Mir6997-201ENSMUST00000184313 71 ntBASIC2.72□□□□□ -1.97
Trim35Q8C006 Gm23125-201ENSMUST00000157651 106 ntBASIC2.71□□□□□ -1.98
Trim35Q8C006 Gm22466-201ENSMUST00000175278 69 ntBASIC2.71□□□□□ -1.98
Trim35Q8C006 9230110F11Rik-202ENSMUST00000212907 191 ntTSL 5 BASIC2.71□□□□□ -1.98
Trim35Q8C006 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Trim35Q8C006 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Trim35Q8C006 Gm24443-201ENSMUST00000157242 132 ntBASIC2.7□□□□□ -1.98
Trim35Q8C006 Gm22929-201ENSMUST00000175517 107 ntBASIC2.7□□□□□ -1.98
Trim35Q8C006 Mir107-201ENSMUST00000083660 87 ntBASIC2.7□□□□□ -1.98
Trim35Q8C006 Gm13065-201ENSMUST00000119178 141 ntBASIC2.69□□□□□ -1.98
Trim35Q8C006 Gm22330-201ENSMUST00000158068 115 ntBASIC2.69□□□□□ -1.98
Trim35Q8C006 Mir6342-201ENSMUST00000183870 125 ntBASIC2.69□□□□□ -1.98
Trim35Q8C006 Mir7118-201ENSMUST00000197760 61 ntBASIC2.69□□□□□ -1.98
Trim35Q8C006 Gm26411-201ENSMUST00000157668 107 ntBASIC2.68□□□□□ -1.98
Trim35Q8C006 Gm25528-201ENSMUST00000180264 132 ntBASIC2.68□□□□□ -1.98
Trim35Q8C006 Mir1949-202ENSMUST00000199259 70 ntBASIC2.68□□□□□ -1.98
Trim35Q8C006 Gm26214-201ENSMUST00000158581 107 ntBASIC2.67□□□□□ -1.98
Trim35Q8C006 Mir544-201ENSMUST00000103813 78 ntBASIC2.66□□□□□ -1.98
Trim35Q8C006 Gm24291-201ENSMUST00000157633 162 ntBASIC2.66□□□□□ -1.98
Trim35Q8C006 Gm25730-201ENSMUST00000178753 165 ntBASIC2.66□□□□□ -1.98
Trim35Q8C006 Mir6386-201ENSMUST00000183558 104 ntBASIC2.66□□□□□ -1.98
Trim35Q8C006 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.66□□□□□ -1.98
Trim35Q8C006 Gm22056-201ENSMUST00000083386 81 ntBASIC2.66□□□□□ -1.98
Trim35Q8C006 Gm25113-201ENSMUST00000157185 143 ntBASIC2.65□□□□□ -1.99
Trim35Q8C006 Snord1a-201ENSMUST00000083160 74 ntBASIC2.65□□□□□ -1.99
Trim35Q8C006 Gm26274-201ENSMUST00000157103 321 ntBASIC2.64□□□□□ -1.99
Trim35Q8C006 Gm24436-201ENSMUST00000157889 302 ntBASIC2.64□□□□□ -1.99
Trim35Q8C006 Mir100-201ENSMUST00000175270 80 ntBASIC2.64□□□□□ -1.99
Trim35Q8C006 Snord69-201ENSMUST00000104024 80 ntBASIC2.63□□□□□ -1.99
Trim35Q8C006 Gm24372-201ENSMUST00000104400 110 ntBASIC2.63□□□□□ -1.99
Trim35Q8C006 Gm23339-201ENSMUST00000158962 139 ntBASIC2.63□□□□□ -1.99
Trim35Q8C006 Mir7013-201ENSMUST00000183540 72 ntBASIC2.63□□□□□ -1.99
Trim35Q8C006 Gm43512-201ENSMUST00000198495 176 ntBASIC2.63□□□□□ -1.99
Trim35Q8C006 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.63□□□□□ -1.99
Trim35Q8C006 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim35Q8C006 Gm24233-201ENSMUST00000104317 122 ntBASIC2.62□□□□□ -1.99
Trim35Q8C006 Gm25945-201ENSMUST00000122484 135 ntBASIC2.62□□□□□ -1.99
Trim35Q8C006 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim35Q8C006 Gm25153-201ENSMUST00000157118 156 ntBASIC2.61□□□□□ -1.99
Trim35Q8C006 Gm26406-201ENSMUST00000158503 124 ntBASIC2.61□□□□□ -1.99
Trim35Q8C006 Gm24549-201ENSMUST00000158647 139 ntBASIC2.61□□□□□ -1.99
Trim35Q8C006 Gm24681-201ENSMUST00000158760 107 ntBASIC2.61□□□□□ -1.99
Trim35Q8C006 Mir324-201ENSMUST00000083600 89 ntBASIC2.61□□□□□ -1.99
Trim35Q8C006 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trim35Q8C006 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
Trim35Q8C006 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trim35Q8C006 Gm22486-201ENSMUST00000116815 137 ntBASIC2.6□□□□□ -1.99
Trim35Q8C006 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.6□□□□□ -1.99
Trim35Q8C006 CT025630.1-201ENSMUST00000227901 172 ntBASIC2.6□□□□□ -1.99
Trim35Q8C006 Snord14a-201ENSMUST00000082807 87 ntBASIC2.6□□□□□ -1.99
Trim35Q8C006 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.59□□□□□ -1.99
Trim35Q8C006 Gm24796-201ENSMUST00000104007 107 ntBASIC2.59□□□□□ -1.99
Trim35Q8C006 Mir1195-201ENSMUST00000116818 98 ntBASIC2.59□□□□□ -1.99
Trim35Q8C006 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.59□□□□□ -1.99
Trim35Q8C006 Mir3103-201ENSMUST00000175474 67 ntBASIC2.59□□□□□ -1.99
Trim35Q8C006 Mir93-201ENSMUST00000083593 88 ntBASIC2.59□□□□□ -1.99
Trim35Q8C006 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trim35Q8C006 Mir466k-201ENSMUST00000116774 122 ntBASIC2.58□□□□□ -2
Trim35Q8C006 Gm22720-201ENSMUST00000122710 87 ntBASIC2.58□□□□□ -2
Trim35Q8C006 Gm23005-201ENSMUST00000158950 136 ntBASIC2.58□□□□□ -2
Trim35Q8C006 Gm27786-201ENSMUST00000184337 70 ntBASIC2.58□□□□□ -2
Trim35Q8C006 Mir7232-201ENSMUST00000197929 74 ntBASIC2.58□□□□□ -2
Trim35Q8C006 AC129019.2-201ENSMUST00000222063 202 ntBASIC2.58□□□□□ -2
Trim35Q8C006 Mir30a-201ENSMUST00000083471 71 ntBASIC2.58□□□□□ -2
Trim35Q8C006 Gm22750-201ENSMUST00000102076 103 ntBASIC2.57□□□□□ -2
Trim35Q8C006 Mir344c-201ENSMUST00000103919 92 ntBASIC2.57□□□□□ -2
Trim35Q8C006 Gm24122-201ENSMUST00000104107 132 ntBASIC2.57□□□□□ -2
Trim35Q8C006 Gm7209-201ENSMUST00000122339 333 ntBASIC2.57□□□□□ -2
Trim35Q8C006 Gm24922-201ENSMUST00000158511 102 ntBASIC2.57□□□□□ -2
Trim35Q8C006 Gm27980-201ENSMUST00000184094 169 ntBASIC2.57□□□□□ -2
Trim35Q8C006 Mir542-201ENSMUST00000102186 85 ntBASIC2.56□□□□□ -2
Trim35Q8C006 Snora36b-201ENSMUST00000104383 132 ntBASIC2.56□□□□□ -2
Trim35Q8C006 Gm25663-201ENSMUST00000157698 135 ntBASIC2.56□□□□□ -2
Trim35Q8C006 Gm25307-201ENSMUST00000158885 106 ntBASIC2.56□□□□□ -2
Trim35Q8C006 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC2.56□□□□□ -2
Trim35Q8C006 Gm45452-201ENSMUST00000210905 177 ntBASIC2.56□□□□□ -2
Trim35Q8C006 Mir23a-201ENSMUST00000083677 75 ntBASIC2.56□□□□□ -2
Trim35Q8C006 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Trim35Q8C006 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim35Q8C006 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.56□□□□□ -2
Trim35Q8C006 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.55□□□□□ -2
Trim35Q8C006 Mir682-201ENSMUST00000102281 96 ntBASIC2.54□□□□□ -2
Trim35Q8C006 Mir466f-1-201ENSMUST00000104779 94 ntBASIC2.54□□□□□ -2
Trim35Q8C006 Gm26247-201ENSMUST00000116702 91 ntBASIC2.54□□□□□ -2
Trim35Q8C006 Gm25715-201ENSMUST00000158627 125 ntBASIC2.54□□□□□ -2
Trim35Q8C006 Mir7675-201ENSMUST00000184262 58 ntBASIC2.54□□□□□ -2
Trim35Q8C006 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.54□□□□□ -2
Trim35Q8C006 Gm23980-201ENSMUST00000157135 158 ntBASIC2.53□□□□□ -2
Trim35Q8C006 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC2.53□□□□□ -2
Trim35Q8C006 Gm44966-201ENSMUST00000208096 157 ntBASIC2.53□□□□□ -2
Trim35Q8C006 Gm23100-201ENSMUST00000083455 141 ntBASIC2.53□□□□□ -2
Trim35Q8C006 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 281.4 ms