Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Gm38295-201ENSMUST00000191951 151 ntBASIC1.39□□□□□ -2.19
Ubp1Q811S7 Gm23991-201ENSMUST00000117033 93 ntBASIC1.38□□□□□ -2.19
Ubp1Q811S7 Gm22559-201ENSMUST00000157329 134 ntBASIC1.38□□□□□ -2.19
Ubp1Q811S7 Gm22205-201ENSMUST00000122655 71 ntBASIC1.37□□□□□ -2.19
Ubp1Q811S7 Gm22100-201ENSMUST00000157926 63 ntBASIC1.37□□□□□ -2.19
Ubp1Q811S7 Gm23221-201ENSMUST00000158118 93 ntBASIC1.37□□□□□ -2.19
Ubp1Q811S7 Gm22074-201ENSMUST00000158595 113 ntBASIC1.37□□□□□ -2.19
Ubp1Q811S7 Gm23416-201ENSMUST00000175520 95 ntBASIC1.37□□□□□ -2.19
Ubp1Q811S7 Gm43927-201ENSMUST00000204599 117 ntBASIC1.37□□□□□ -2.19
Ubp1Q811S7 Mir33-201ENSMUST00000083531 69 ntBASIC1.37□□□□□ -2.19
Ubp1Q811S7 Gm22827-201ENSMUST00000083766 107 ntBASIC1.37□□□□□ -2.19
Ubp1Q811S7 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.37□□□□□ -2.19
Ubp1Q811S7 Gm24384-201ENSMUST00000122693 75 ntBASIC1.36□□□□□ -2.19
Ubp1Q811S7 Gm23291-201ENSMUST00000175611 78 ntBASIC1.36□□□□□ -2.19
Ubp1Q811S7 Gm25696-201ENSMUST00000082900 105 ntBASIC1.36□□□□□ -2.19
Ubp1Q811S7 Gm22652-201ENSMUST00000083207 131 ntBASIC1.36□□□□□ -2.19
Ubp1Q811S7 Mir5117-201ENSMUST00000083226 84 ntBASIC1.36□□□□□ -2.19
Ubp1Q811S7 Gm24697-201ENSMUST00000083881 107 ntBASIC1.36□□□□□ -2.19
Ubp1Q811S7 Gm25040-201ENSMUST00000103877 66 ntBASIC1.35□□□□□ -2.19
Ubp1Q811S7 Gm13065-201ENSMUST00000119178 141 ntBASIC1.35□□□□□ -2.19
Ubp1Q811S7 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.35□□□□□ -2.19
Ubp1Q811S7 Gm22605-201ENSMUST00000158289 108 ntBASIC1.35□□□□□ -2.19
Ubp1Q811S7 Gm24637-201ENSMUST00000158674 85 ntBASIC1.35□□□□□ -2.19
Ubp1Q811S7 Gm28435-201ENSMUST00000185496 108 ntBASIC1.35□□□□□ -2.19
Ubp1Q811S7 Gm29047-201ENSMUST00000189816 108 ntBASIC1.35□□□□□ -2.19
Ubp1Q811S7 DQ267101-201ENSMUST00000082562 73 ntBASIC1.35□□□□□ -2.19
Ubp1Q811S7 Snora75-201ENSMUST00000082903 133 ntBASIC1.35□□□□□ -2.19
Ubp1Q811S7 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.34□□□□□ -2.19
Ubp1Q811S7 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Ubp1Q811S7 Gm23336-201ENSMUST00000117023 123 ntBASIC1.34□□□□□ -2.19
Ubp1Q811S7 Gm23788-201ENSMUST00000122535 106 ntBASIC1.34□□□□□ -2.19
Ubp1Q811S7 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.34□□□□□ -2.19
Ubp1Q811S7 Mir7010-201ENSMUST00000183464 63 ntBASIC1.34□□□□□ -2.19
Ubp1Q811S7 Mir6342-201ENSMUST00000183870 125 ntBASIC1.34□□□□□ -2.19
Ubp1Q811S7 Gm27717-201ENSMUST00000183933 151 ntBASIC1.34□□□□□ -2.19
Ubp1Q811S7 Mir1949-202ENSMUST00000199259 70 ntBASIC1.34□□□□□ -2.19
Ubp1Q811S7 Gm43907-201ENSMUST00000203128 117 ntBASIC1.34□□□□□ -2.19
Ubp1Q811S7 Gm23766-201ENSMUST00000103894 80 ntBASIC1.33□□□□□ -2.2
Ubp1Q811S7 Gm22786-201ENSMUST00000104086 122 ntBASIC1.33□□□□□ -2.2
Ubp1Q811S7 Gm22732-201ENSMUST00000158093 121 ntBASIC1.33□□□□□ -2.2
Ubp1Q811S7 Gm26712-201ENSMUST00000180813 217 ntBASIC1.33□□□□□ -2.2
Ubp1Q811S7 Gm44211-201ENSMUST00000204867 145 ntBASIC1.33□□□□□ -2.2
Ubp1Q811S7 Gm24202-201ENSMUST00000082948 103 ntBASIC1.33□□□□□ -2.2
Ubp1Q811S7 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Ubp1Q811S7 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.32□□□□□ -2.2
Ubp1Q811S7 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
Ubp1Q811S7 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.31□□□□□ -2.2
Ubp1Q811S7 Gm25138-201ENSMUST00000083248 136 ntBASIC1.31□□□□□ -2.2
Ubp1Q811S7 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
Ubp1Q811S7 Gm27326-201ENSMUST00000183504 95 ntBASIC1.3□□□□□ -2.2
Ubp1Q811S7 Gm3702-201ENSMUST00000211754 346 ntBASIC1.3□□□□□ -2.2
Ubp1Q811S7 Gm25366-201ENSMUST00000158845 124 ntBASIC1.29□□□□□ -2.2
Ubp1Q811S7 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.29□□□□□ -2.2
Ubp1Q811S7 Gm43038-201ENSMUST00000202359 88 ntBASIC1.29□□□□□ -2.2
Ubp1Q811S7 Mir8116-201ENSMUST00000184134 97 ntBASIC1.28□□□□□ -2.2
Ubp1Q811S7 Gm28794-201ENSMUST00000185276 136 ntBASIC1.28□□□□□ -2.2
Ubp1Q811S7 Gm27975-201ENSMUST00000184400 101 ntBASIC1.27□□□□□ -2.21
Ubp1Q811S7 Snord32a-201ENSMUST00000083285 83 ntBASIC1.27□□□□□ -2.21
Ubp1Q811S7 Gm24073-201ENSMUST00000158177 106 ntBASIC1.26□□□□□ -2.21
Ubp1Q811S7 Snord35a-201ENSMUST00000083884 90 ntBASIC1.26□□□□□ -2.21
Ubp1Q811S7 Gm23528-201ENSMUST00000104571 132 ntBASIC1.25□□□□□ -2.21
Ubp1Q811S7 Gm27974-201ENSMUST00000183415 105 ntBASIC1.25□□□□□ -2.21
Ubp1Q811S7 Mir211-201ENSMUST00000083651 106 ntBASIC1.25□□□□□ -2.21
Ubp1Q811S7 Gm24233-201ENSMUST00000104317 122 ntBASIC1.24□□□□□ -2.21
Ubp1Q811S7 Gm22679-201ENSMUST00000116975 100 ntBASIC1.24□□□□□ -2.21
Ubp1Q811S7 Gm25300-201ENSMUST00000175284 84 ntBASIC1.24□□□□□ -2.21
Ubp1Q811S7 Mir7665-201ENSMUST00000184907 63 ntBASIC1.24□□□□□ -2.21
Ubp1Q811S7 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.24□□□□□ -2.21
Ubp1Q811S7 Gm24500-201ENSMUST00000158447 124 ntBASIC1.23□□□□□ -2.21
Ubp1Q811S7 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Ubp1Q811S7 Gm23708-201ENSMUST00000104367 123 ntBASIC1.22□□□□□ -2.21
Ubp1Q811S7 Snord2-201ENSMUST00000157899 69 ntBASIC1.22□□□□□ -2.21
Ubp1Q811S7 Mir3098-201ENSMUST00000175416 87 ntBASIC1.22□□□□□ -2.21
Ubp1Q811S7 Mir7063-201ENSMUST00000184158 91 ntBASIC1.22□□□□□ -2.21
Ubp1Q811S7 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Ubp1Q811S7 Gm6985-201ENSMUST00000121255 271 ntBASIC1.21□□□□□ -2.22
Ubp1Q811S7 Gm23468-201ENSMUST00000157125 108 ntBASIC1.21□□□□□ -2.22
Ubp1Q811S7 Gm22520-201ENSMUST00000158269 129 ntBASIC1.21□□□□□ -2.22
Ubp1Q811S7 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.21□□□□□ -2.22
Ubp1Q811S7 Snora26-201ENSMUST00000175614 121 ntBASIC1.21□□□□□ -2.22
Ubp1Q811S7 Gm25870-201ENSMUST00000179845 79 ntBASIC1.21□□□□□ -2.22
Ubp1Q811S7 Gm27943-201ENSMUST00000184844 116 ntBASIC1.21□□□□□ -2.22
Ubp1Q811S7 Mir6962-201ENSMUST00000199512 63 ntBASIC1.21□□□□□ -2.22
Ubp1Q811S7 Gm24865-201ENSMUST00000103246 96 ntBASIC1.2□□□□□ -2.22
Ubp1Q811S7 Gm25622-201ENSMUST00000157217 104 ntBASIC1.2□□□□□ -2.22
Ubp1Q811S7 Gm23893-201ENSMUST00000158106 134 ntBASIC1.2□□□□□ -2.22
Ubp1Q811S7 Gm24942-201ENSMUST00000158328 114 ntBASIC1.2□□□□□ -2.22
Ubp1Q811S7 Mir6364-201ENSMUST00000183396 86 ntBASIC1.19□□□□□ -2.22
Ubp1Q811S7 Mir448-201ENSMUST00000083516 112 ntBASIC1.19□□□□□ -2.22
Ubp1Q811S7 Gm26082-201ENSMUST00000104070 127 ntBASIC1.18□□□□□ -2.22
Ubp1Q811S7 Gm25798-201ENSMUST00000082641 107 ntBASIC1.18□□□□□ -2.22
Ubp1Q811S7 Gm25644-201ENSMUST00000083209 107 ntBASIC1.18□□□□□ -2.22
Ubp1Q811S7 Gm25061-201ENSMUST00000104665 107 ntBASIC1.17□□□□□ -2.22
Ubp1Q811S7 Gm23500-201ENSMUST00000157735 98 ntBASIC1.17□□□□□ -2.22
Ubp1Q811S7 Gm24678-201ENSMUST00000158756 104 ntBASIC1.17□□□□□ -2.22
Ubp1Q811S7 Gm24624-201ENSMUST00000082617 164 ntBASIC1.17□□□□□ -2.22
Ubp1Q811S7 Gm22485-201ENSMUST00000157990 109 ntBASIC1.16□□□□□ -2.22
Ubp1Q811S7 Mir1950-201ENSMUST00000158526 74 ntBASIC1.16□□□□□ -2.22
Ubp1Q811S7 Mir3968-201ENSMUST00000175355 100 ntBASIC1.16□□□□□ -2.22
Ubp1Q811S7 Gm43911-201ENSMUST00000203097 76 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 171.2 ms