Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm25693-201ENSMUST00000175443 85 ntBASIC1.72□□□□□ -2.13
Pcdh19Q80TF3 Gm23289-201ENSMUST00000175615 108 ntBASIC1.72□□□□□ -2.13
Pcdh19Q80TF3 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Pcdh19Q80TF3 Gm24208-201ENSMUST00000082783 135 ntBASIC1.72□□□□□ -2.13
Pcdh19Q80TF3 Gm24134-201ENSMUST00000083361 71 ntBASIC1.72□□□□□ -2.13
Pcdh19Q80TF3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.72□□□□□ -2.13
Pcdh19Q80TF3 Gm25496-201ENSMUST00000104430 120 ntBASIC1.71□□□□□ -2.14
Pcdh19Q80TF3 Mir873a-201ENSMUST00000104863 77 ntBASIC1.71□□□□□ -2.14
Pcdh19Q80TF3 Gm24262-201ENSMUST00000157431 144 ntBASIC1.71□□□□□ -2.14
Pcdh19Q80TF3 Gm24476-201ENSMUST00000157437 131 ntBASIC1.71□□□□□ -2.14
Pcdh19Q80TF3 Gm24290-201ENSMUST00000157634 96 ntBASIC1.71□□□□□ -2.14
Pcdh19Q80TF3 Gm22556-201ENSMUST00000157803 100 ntBASIC1.71□□□□□ -2.14
Pcdh19Q80TF3 Gm24311-201ENSMUST00000082570 104 ntBASIC1.71□□□□□ -2.14
Pcdh19Q80TF3 Mir653-201ENSMUST00000102402 85 ntBASIC1.7□□□□□ -2.14
Pcdh19Q80TF3 Gm25279-201ENSMUST00000122608 133 ntBASIC1.7□□□□□ -2.14
Pcdh19Q80TF3 Gm25366-201ENSMUST00000158845 124 ntBASIC1.7□□□□□ -2.14
Pcdh19Q80TF3 Gm25936-201ENSMUST00000179952 114 ntBASIC1.7□□□□□ -2.14
Pcdh19Q80TF3 Gm27549-201ENSMUST00000183508 62 ntBASIC1.7□□□□□ -2.14
Pcdh19Q80TF3 Gm36956-201ENSMUST00000193830 214 ntBASIC1.7□□□□□ -2.14
Pcdh19Q80TF3 Snord96a-201ENSMUST00000082791 81 ntBASIC1.7□□□□□ -2.14
Pcdh19Q80TF3 Gm23377-201ENSMUST00000082943 126 ntBASIC1.7□□□□□ -2.14
Pcdh19Q80TF3 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Pcdh19Q80TF3 Mir709-201ENSMUST00000102190 88 ntBASIC1.69□□□□□ -2.14
Pcdh19Q80TF3 Mir301b-201ENSMUST00000102333 97 ntBASIC1.69□□□□□ -2.14
Pcdh19Q80TF3 Gm24983-201ENSMUST00000104457 69 ntBASIC1.69□□□□□ -2.14
Pcdh19Q80TF3 Gm25541-201ENSMUST00000116888 126 ntBASIC1.69□□□□□ -2.14
Pcdh19Q80TF3 Gm22788-201ENSMUST00000157876 61 ntBASIC1.69□□□□□ -2.14
Pcdh19Q80TF3 Gm26089-201ENSMUST00000157898 107 ntBASIC1.69□□□□□ -2.14
Pcdh19Q80TF3 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.69□□□□□ -2.14
Pcdh19Q80TF3 Mir324-201ENSMUST00000083600 89 ntBASIC1.69□□□□□ -2.14
Pcdh19Q80TF3 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.68□□□□□ -2.14
Pcdh19Q80TF3 Gm24073-201ENSMUST00000158177 106 ntBASIC1.68□□□□□ -2.14
Pcdh19Q80TF3 Gm22406-201ENSMUST00000174923 93 ntBASIC1.68□□□□□ -2.14
Pcdh19Q80TF3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.68□□□□□ -2.14
Pcdh19Q80TF3 Gm43907-201ENSMUST00000203128 117 ntBASIC1.68□□□□□ -2.14
Pcdh19Q80TF3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.68□□□□□ -2.14
Pcdh19Q80TF3 Mir148b-201ENSMUST00000083626 97 ntBASIC1.68□□□□□ -2.14
Pcdh19Q80TF3 Gm22761-201ENSMUST00000102278 96 ntBASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 Gm22030-201ENSMUST00000116942 63 ntBASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 Gm24154-201ENSMUST00000175261 130 ntBASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 Gm24638-201ENSMUST00000179807 132 ntBASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 Gm27898-201ENSMUST00000183987 80 ntBASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 Snord45b-201ENSMUST00000082797 71 ntBASIC1.67□□□□□ -2.14
Pcdh19Q80TF3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Pcdh19Q80TF3 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.66□□□□□ -2.14
Pcdh19Q80TF3 Gm24076-201ENSMUST00000158179 94 ntBASIC1.66□□□□□ -2.14
Pcdh19Q80TF3 Mir1961-201ENSMUST00000158643 112 ntBASIC1.66□□□□□ -2.14
Pcdh19Q80TF3 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Pcdh19Q80TF3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
Pcdh19Q80TF3 Gm25328-201ENSMUST00000175013 107 ntBASIC1.65□□□□□ -2.15
Pcdh19Q80TF3 Gm27420-201ENSMUST00000183823 79 ntBASIC1.65□□□□□ -2.15
Pcdh19Q80TF3 Gm45754-201ENSMUST00000212380 279 ntBASIC1.65□□□□□ -2.15
Pcdh19Q80TF3 Snora75-201ENSMUST00000082903 133 ntBASIC1.65□□□□□ -2.15
Pcdh19Q80TF3 Gm22786-201ENSMUST00000104086 122 ntBASIC1.64□□□□□ -2.15
Pcdh19Q80TF3 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.64□□□□□ -2.15
Pcdh19Q80TF3 Gm23114-201ENSMUST00000158478 117 ntBASIC1.64□□□□□ -2.15
Pcdh19Q80TF3 Gm44396-201ENSMUST00000199843 114 ntBASIC1.64□□□□□ -2.15
Pcdh19Q80TF3 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.64□□□□□ -2.15
Pcdh19Q80TF3 Gm25652-201ENSMUST00000083780 103 ntBASIC1.64□□□□□ -2.15
Pcdh19Q80TF3 Gm25759-201ENSMUST00000103988 129 ntBASIC1.63□□□□□ -2.15
Pcdh19Q80TF3 Gm27993-201ENSMUST00000184362 85 ntBASIC1.63□□□□□ -2.15
Pcdh19Q80TF3 Gm28383-201ENSMUST00000187563 139 ntBASIC1.63□□□□□ -2.15
Pcdh19Q80TF3 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.63□□□□□ -2.15
Pcdh19Q80TF3 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.63□□□□□ -2.15
Pcdh19Q80TF3 Gm22078-201ENSMUST00000157593 103 ntBASIC1.62□□□□□ -2.15
Pcdh19Q80TF3 Mir6905-201ENSMUST00000184228 70 ntBASIC1.62□□□□□ -2.15
Pcdh19Q80TF3 Gm25183-201ENSMUST00000157752 106 ntBASIC1.61□□□□□ -2.15
Pcdh19Q80TF3 Gm22551-201ENSMUST00000157795 103 ntBASIC1.61□□□□□ -2.15
Pcdh19Q80TF3 Gm24222-201ENSMUST00000158834 93 ntBASIC1.61□□□□□ -2.15
Pcdh19Q80TF3 Gm27450-201ENSMUST00000104632 90 ntBASIC1.6□□□□□ -2.15
Pcdh19Q80TF3 Gm26257-201ENSMUST00000122500 107 ntBASIC1.6□□□□□ -2.15
Pcdh19Q80TF3 Gm18433-201ENSMUST00000192747 197 ntBASIC1.6□□□□□ -2.15
Pcdh19Q80TF3 Gm26224-201ENSMUST00000082506 80 ntBASIC1.6□□□□□ -2.15
Pcdh19Q80TF3 Mir3108-201ENSMUST00000175500 79 ntBASIC1.59□□□□□ -2.15
Pcdh19Q80TF3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
Pcdh19Q80TF3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Pcdh19Q80TF3 Gm23991-201ENSMUST00000117033 93 ntBASIC1.58□□□□□ -2.16
Pcdh19Q80TF3 Gm22039-201ENSMUST00000157278 132 ntBASIC1.58□□□□□ -2.16
Pcdh19Q80TF3 Snord2-201ENSMUST00000157899 69 ntBASIC1.58□□□□□ -2.16
Pcdh19Q80TF3 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.58□□□□□ -2.16
Pcdh19Q80TF3 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
Pcdh19Q80TF3 Gm25832-201ENSMUST00000104140 130 ntBASIC1.57□□□□□ -2.16
Pcdh19Q80TF3 Gm26181-201ENSMUST00000157687 106 ntBASIC1.57□□□□□ -2.16
Pcdh19Q80TF3 Gm23649-201ENSMUST00000179007 107 ntBASIC1.57□□□□□ -2.16
Pcdh19Q80TF3 Gm43944-201ENSMUST00000205220 120 ntBASIC1.57□□□□□ -2.16
Pcdh19Q80TF3 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 Gm24580-201ENSMUST00000103965 131 ntBASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 Gm23130-201ENSMUST00000104252 74 ntBASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 Gm23336-201ENSMUST00000117023 123 ntBASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 Gm22100-201ENSMUST00000157926 63 ntBASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 Mir1933-201ENSMUST00000158930 88 ntBASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 Traj60-201ENSMUST00000167781 54 ntBASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 Mir3087-201ENSMUST00000199405 56 ntBASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 AC160976.1-201ENSMUST00000215092 148 ntBASIC1.56□□□□□ -2.16
Pcdh19Q80TF3 Gm23072-201ENSMUST00000158243 123 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 3190.9 ms