Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Scaf4Q6PFF0 Gm24677-201ENSMUST00000158755 150 ntBASIC1.48□□□□□ -2.17
Scaf4Q6PFF0 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
Scaf4Q6PFF0 Gm25991-201ENSMUST00000102439 99 ntBASIC1.47□□□□□ -2.17
Scaf4Q6PFF0 Gm22788-201ENSMUST00000157876 61 ntBASIC1.47□□□□□ -2.17
Scaf4Q6PFF0 Gm24221-201ENSMUST00000158833 313 ntBASIC1.47□□□□□ -2.17
Scaf4Q6PFF0 Gm26359-201ENSMUST00000158873 101 ntBASIC1.47□□□□□ -2.17
Scaf4Q6PFF0 Gm23291-201ENSMUST00000175611 78 ntBASIC1.47□□□□□ -2.17
Scaf4Q6PFF0 Mir6352-201ENSMUST00000184495 116 ntBASIC1.47□□□□□ -2.17
Scaf4Q6PFF0 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Scaf4Q6PFF0 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Scaf4Q6PFF0 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Scaf4Q6PFF0 Gm22030-201ENSMUST00000116942 63 ntBASIC1.46□□□□□ -2.18
Scaf4Q6PFF0 Gm22413-201ENSMUST00000175465 85 ntBASIC1.46□□□□□ -2.18
Scaf4Q6PFF0 Gm18433-201ENSMUST00000192747 197 ntBASIC1.46□□□□□ -2.18
Scaf4Q6PFF0 Mir216b-201ENSMUST00000102363 86 ntBASIC1.45□□□□□ -2.18
Scaf4Q6PFF0 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Scaf4Q6PFF0 Gm26029-201ENSMUST00000158659 132 ntBASIC1.45□□□□□ -2.18
Scaf4Q6PFF0 Gm25366-201ENSMUST00000158845 124 ntBASIC1.45□□□□□ -2.18
Scaf4Q6PFF0 Gm43944-201ENSMUST00000205220 120 ntBASIC1.45□□□□□ -2.18
Scaf4Q6PFF0 Mir324-201ENSMUST00000083600 89 ntBASIC1.45□□□□□ -2.18
Scaf4Q6PFF0 Mir653-201ENSMUST00000102402 85 ntBASIC1.44□□□□□ -2.18
Scaf4Q6PFF0 Gm22785-201ENSMUST00000104087 132 ntBASIC1.44□□□□□ -2.18
Scaf4Q6PFF0 Gm6985-201ENSMUST00000121255 271 ntBASIC1.44□□□□□ -2.18
Scaf4Q6PFF0 Gm22164-201ENSMUST00000158413 106 ntBASIC1.44□□□□□ -2.18
Scaf4Q6PFF0 Mir3064-201ENSMUST00000175532 67 ntBASIC1.44□□□□□ -2.18
Scaf4Q6PFF0 Gm44396-201ENSMUST00000199843 114 ntBASIC1.44□□□□□ -2.18
Scaf4Q6PFF0 Gm44408-201ENSMUST00000200205 66 ntBASIC1.44□□□□□ -2.18
Scaf4Q6PFF0 Gm43907-201ENSMUST00000203128 117 ntBASIC1.44□□□□□ -2.18
Scaf4Q6PFF0 Gm24311-201ENSMUST00000082570 104 ntBASIC1.44□□□□□ -2.18
Scaf4Q6PFF0 Gm23114-201ENSMUST00000158478 117 ntBASIC1.43□□□□□ -2.18
Scaf4Q6PFF0 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.43□□□□□ -2.18
Scaf4Q6PFF0 Mir148b-201ENSMUST00000083626 97 ntBASIC1.43□□□□□ -2.18
Scaf4Q6PFF0 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Scaf4Q6PFF0 Gm22761-201ENSMUST00000102278 96 ntBASIC1.42□□□□□ -2.18
Scaf4Q6PFF0 Gm25756-201ENSMUST00000103990 136 ntBASIC1.42□□□□□ -2.18
Scaf4Q6PFF0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.42□□□□□ -2.18
Scaf4Q6PFF0 Gm23289-201ENSMUST00000175615 108 ntBASIC1.42□□□□□ -2.18
Scaf4Q6PFF0 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.42□□□□□ -2.18
Scaf4Q6PFF0 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.42□□□□□ -2.18
Scaf4Q6PFF0 Mir320-201ENSMUST00000083594 82 ntBASIC1.42□□□□□ -2.18
Scaf4Q6PFF0 Gm22551-201ENSMUST00000157795 103 ntBASIC1.41□□□□□ -2.18
Scaf4Q6PFF0 Gm23477-201ENSMUST00000158882 128 ntBASIC1.41□□□□□ -2.18
Scaf4Q6PFF0 Mir1933-201ENSMUST00000158930 88 ntBASIC1.41□□□□□ -2.18
Scaf4Q6PFF0 Gm23301-201ENSMUST00000082713 65 ntBASIC1.41□□□□□ -2.18
Scaf4Q6PFF0 Snora75-201ENSMUST00000082903 133 ntBASIC1.41□□□□□ -2.18
Scaf4Q6PFF0 Gm24983-201ENSMUST00000104457 69 ntBASIC1.4□□□□□ -2.19
Scaf4Q6PFF0 Gm22559-201ENSMUST00000157329 134 ntBASIC1.4□□□□□ -2.19
Scaf4Q6PFF0 Snord13-201ENSMUST00000157627 104 ntBASIC1.4□□□□□ -2.19
Scaf4Q6PFF0 Gm22406-201ENSMUST00000174923 93 ntBASIC1.4□□□□□ -2.19
Scaf4Q6PFF0 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.4□□□□□ -2.19
Scaf4Q6PFF0 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.4□□□□□ -2.19
Scaf4Q6PFF0 Gm22556-201ENSMUST00000157803 100 ntBASIC1.39□□□□□ -2.19
Scaf4Q6PFF0 Gm22100-201ENSMUST00000157926 63 ntBASIC1.39□□□□□ -2.19
Scaf4Q6PFF0 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Scaf4Q6PFF0 Gm24638-201ENSMUST00000179807 132 ntBASIC1.39□□□□□ -2.19
Scaf4Q6PFF0 Gm27898-201ENSMUST00000183987 80 ntBASIC1.39□□□□□ -2.19
Scaf4Q6PFF0 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Scaf4Q6PFF0 Gm23130-201ENSMUST00000104252 74 ntBASIC1.38□□□□□ -2.19
Scaf4Q6PFF0 Gm25495-201ENSMUST00000104431 131 ntBASIC1.38□□□□□ -2.19
Scaf4Q6PFF0 Gm22541-201ENSMUST00000158165 127 ntBASIC1.38□□□□□ -2.19
Scaf4Q6PFF0 Gm24073-201ENSMUST00000158177 106 ntBASIC1.38□□□□□ -2.19
Scaf4Q6PFF0 Gm23339-201ENSMUST00000158962 139 ntBASIC1.38□□□□□ -2.19
Scaf4Q6PFF0 Gm24134-201ENSMUST00000083361 71 ntBASIC1.38□□□□□ -2.19
Scaf4Q6PFF0 Mir126a-201ENSMUST00000083606 73 ntBASIC1.38□□□□□ -2.19
Scaf4Q6PFF0 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.38□□□□□ -2.19
Scaf4Q6PFF0 Mir301b-201ENSMUST00000102333 97 ntBASIC1.37□□□□□ -2.19
Scaf4Q6PFF0 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.37□□□□□ -2.19
Scaf4Q6PFF0 Gm24396-201ENSMUST00000116905 93 ntBASIC1.37□□□□□ -2.19
Scaf4Q6PFF0 Gm11857-201ENSMUST00000119817 324 ntBASIC1.37□□□□□ -2.19
Scaf4Q6PFF0 Gm24076-201ENSMUST00000158179 94 ntBASIC1.37□□□□□ -2.19
Scaf4Q6PFF0 Gm22466-201ENSMUST00000175278 69 ntBASIC1.37□□□□□ -2.19
Scaf4Q6PFF0 Snord96a-201ENSMUST00000082791 81 ntBASIC1.37□□□□□ -2.19
Scaf4Q6PFF0 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.37□□□□□ -2.19
Scaf4Q6PFF0 Mir741-201ENSMUST00000103931 71 ntBASIC1.36□□□□□ -2.19
Scaf4Q6PFF0 Gm22786-201ENSMUST00000104086 122 ntBASIC1.36□□□□□ -2.19
Scaf4Q6PFF0 Gm25416-201ENSMUST00000104221 107 ntBASIC1.36□□□□□ -2.19
Scaf4Q6PFF0 Gm23991-201ENSMUST00000117033 93 ntBASIC1.36□□□□□ -2.19
Scaf4Q6PFF0 Gm26274-201ENSMUST00000157103 321 ntBASIC1.36□□□□□ -2.19
Scaf4Q6PFF0 Gm25552-201ENSMUST00000158081 91 ntBASIC1.36□□□□□ -2.19
Scaf4Q6PFF0 Gm22203-201ENSMUST00000158605 58 ntBASIC1.36□□□□□ -2.19
Scaf4Q6PFF0 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.36□□□□□ -2.19
Scaf4Q6PFF0 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.36□□□□□ -2.19
Scaf4Q6PFF0 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Scaf4Q6PFF0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.35□□□□□ -2.19
Scaf4Q6PFF0 Gm27420-201ENSMUST00000183823 79 ntBASIC1.35□□□□□ -2.19
Scaf4Q6PFF0 Mir3087-201ENSMUST00000199405 56 ntBASIC1.35□□□□□ -2.19
Scaf4Q6PFF0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.35□□□□□ -2.19
Scaf4Q6PFF0 Gm23500-201ENSMUST00000157735 98 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Snord2-201ENSMUST00000157899 69 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Gm23856-201ENSMUST00000158380 99 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Gm24549-201ENSMUST00000158647 139 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Gm24331-201ENSMUST00000175099 67 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Gm24154-201ENSMUST00000175261 130 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Gm23801-201ENSMUST00000175561 67 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Gm24485-201ENSMUST00000178283 67 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Gm27711-201ENSMUST00000183802 118 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Gm27493-201ENSMUST00000184128 78 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Mir30a-201ENSMUST00000083471 71 ntBASIC1.34□□□□□ -2.19
Scaf4Q6PFF0 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 148.7 ms