Protein–RNA interactions for Protein: Q6P7W2

Shkbp1, SH3KBP1-binding protein 1, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1Q6P7W2 Gm23329-201ENSMUST00000157415 108 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm24077-201ENSMUST00000158183 136 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm26158-201ENSMUST00000158973 119 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm22862-201ENSMUST00000178593 121 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Mir6390-201ENSMUST00000184405 129 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm44384-201ENSMUST00000200208 114 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Gm24624-201ENSMUST00000082617 164 ntBASIC1.34□□□□□ -2.19
Shkbp1Q6P7W2 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Shkbp1Q6P7W2 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.33□□□□□ -2.2
Shkbp1Q6P7W2 Gm24208-201ENSMUST00000082783 135 ntBASIC1.33□□□□□ -2.2
Shkbp1Q6P7W2 Gm22753-201ENSMUST00000083657 107 ntBASIC1.33□□□□□ -2.2
Shkbp1Q6P7W2 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.33□□□□□ -2.2
Shkbp1Q6P7W2 Gm24252-201ENSMUST00000083700 132 ntBASIC1.33□□□□□ -2.2
Shkbp1Q6P7W2 Gm24677-201ENSMUST00000158755 150 ntBASIC1.32□□□□□ -2.2
Shkbp1Q6P7W2 Gm27993-201ENSMUST00000184362 85 ntBASIC1.32□□□□□ -2.2
Shkbp1Q6P7W2 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Shkbp1Q6P7W2 Gm26207-201ENSMUST00000082909 104 ntBASIC1.32□□□□□ -2.2
Shkbp1Q6P7W2 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Shkbp1Q6P7W2 Gm11333-201ENSMUST00000119479 148 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm22082-201ENSMUST00000157587 161 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm26089-201ENSMUST00000157898 107 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm23339-201ENSMUST00000158962 139 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm24495-201ENSMUST00000178575 79 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm22253-201ENSMUST00000179870 79 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm28435-201ENSMUST00000185496 108 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm29047-201ENSMUST00000189816 108 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm44488-201ENSMUST00000199467 119 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Shkbp1Q6P7W2 Gm24988-201ENSMUST00000104460 121 ntBASIC1.3□□□□□ -2.2
Shkbp1Q6P7W2 Gm22030-201ENSMUST00000116942 63 ntBASIC1.3□□□□□ -2.2
Shkbp1Q6P7W2 Gm25870-201ENSMUST00000179845 79 ntBASIC1.3□□□□□ -2.2
Shkbp1Q6P7W2 Gm44396-201ENSMUST00000199843 114 ntBASIC1.3□□□□□ -2.2
Shkbp1Q6P7W2 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.3□□□□□ -2.2
Shkbp1Q6P7W2 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.3□□□□□ -2.2
Shkbp1Q6P7W2 Gm23570-201ENSMUST00000083029 104 ntBASIC1.3□□□□□ -2.2
Shkbp1Q6P7W2 Gm22673-201ENSMUST00000104415 131 ntBASIC1.29□□□□□ -2.2
Shkbp1Q6P7W2 Gm26301-201ENSMUST00000104813 95 ntBASIC1.29□□□□□ -2.2
Shkbp1Q6P7W2 Gm25056-201ENSMUST00000157372 62 ntBASIC1.29□□□□□ -2.2
Shkbp1Q6P7W2 Mir196b-201ENSMUST00000083509 85 ntBASIC1.29□□□□□ -2.2
Shkbp1Q6P7W2 Mir216b-201ENSMUST00000102363 86 ntBASIC1.28□□□□□ -2.2
Shkbp1Q6P7W2 Gm23114-201ENSMUST00000158478 117 ntBASIC1.28□□□□□ -2.2
Shkbp1Q6P7W2 Mir1933-201ENSMUST00000158930 88 ntBASIC1.28□□□□□ -2.2
Shkbp1Q6P7W2 Mir324-201ENSMUST00000083600 89 ntBASIC1.28□□□□□ -2.2
Shkbp1Q6P7W2 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.27□□□□□ -2.21
Shkbp1Q6P7W2 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.27□□□□□ -2.21
Shkbp1Q6P7W2 Gm23328-201ENSMUST00000157418 132 ntBASIC1.27□□□□□ -2.21
Shkbp1Q6P7W2 Gm24290-201ENSMUST00000157634 96 ntBASIC1.27□□□□□ -2.21
Shkbp1Q6P7W2 Gm25160-201ENSMUST00000158914 102 ntBASIC1.27□□□□□ -2.21
Shkbp1Q6P7W2 Snord96a-201ENSMUST00000082791 81 ntBASIC1.27□□□□□ -2.21
Shkbp1Q6P7W2 Gm23376-201ENSMUST00000082938 160 ntBASIC1.27□□□□□ -2.21
Shkbp1Q6P7W2 Gm23130-201ENSMUST00000104252 74 ntBASIC1.26□□□□□ -2.21
Shkbp1Q6P7W2 Gm24262-201ENSMUST00000157431 144 ntBASIC1.26□□□□□ -2.21
Shkbp1Q6P7W2 Gm25693-201ENSMUST00000175443 85 ntBASIC1.26□□□□□ -2.21
Shkbp1Q6P7W2 Gm23291-201ENSMUST00000175611 78 ntBASIC1.26□□□□□ -2.21
Shkbp1Q6P7W2 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.26□□□□□ -2.21
Shkbp1Q6P7W2 Gm24202-201ENSMUST00000082948 103 ntBASIC1.26□□□□□ -2.21
Shkbp1Q6P7W2 Gm25274-201ENSMUST00000104296 135 ntBASIC1.25□□□□□ -2.21
Shkbp1Q6P7W2 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Shkbp1Q6P7W2 Gm26274-201ENSMUST00000157103 321 ntBASIC1.25□□□□□ -2.21
Shkbp1Q6P7W2 Gm22788-201ENSMUST00000157876 61 ntBASIC1.25□□□□□ -2.21
Shkbp1Q6P7W2 Gm25768-201ENSMUST00000158570 98 ntBASIC1.25□□□□□ -2.21
Shkbp1Q6P7W2 Gm26499-201ENSMUST00000178544 79 ntBASIC1.25□□□□□ -2.21
Shkbp1Q6P7W2 Gm26096-201ENSMUST00000179084 79 ntBASIC1.25□□□□□ -2.21
Shkbp1Q6P7W2 Gm27420-201ENSMUST00000183823 79 ntBASIC1.25□□□□□ -2.21
Shkbp1Q6P7W2 Gm23203-201ENSMUST00000104374 107 ntBASIC1.24□□□□□ -2.21
Shkbp1Q6P7W2 Gm25622-201ENSMUST00000157217 104 ntBASIC1.24□□□□□ -2.21
Shkbp1Q6P7W2 Gm23761-201ENSMUST00000158347 104 ntBASIC1.24□□□□□ -2.21
Shkbp1Q6P7W2 Gm43944-201ENSMUST00000205220 120 ntBASIC1.24□□□□□ -2.21
Shkbp1Q6P7W2 Gm25964-201ENSMUST00000157171 97 ntBASIC1.23□□□□□ -2.21
Shkbp1Q6P7W2 Gm24942-201ENSMUST00000158328 114 ntBASIC1.23□□□□□ -2.21
Shkbp1Q6P7W2 Gm22095-201ENSMUST00000158984 150 ntBASIC1.23□□□□□ -2.21
Shkbp1Q6P7W2 Gm25936-201ENSMUST00000179952 114 ntBASIC1.23□□□□□ -2.21
Shkbp1Q6P7W2 Gm43907-201ENSMUST00000203128 117 ntBASIC1.23□□□□□ -2.21
Shkbp1Q6P7W2 Gm23301-201ENSMUST00000082713 65 ntBASIC1.23□□□□□ -2.21
Shkbp1Q6P7W2 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.23□□□□□ -2.21
Shkbp1Q6P7W2 Mir653-201ENSMUST00000102402 85 ntBASIC1.22□□□□□ -2.21
Shkbp1Q6P7W2 Snord69-201ENSMUST00000104024 80 ntBASIC1.22□□□□□ -2.21
Shkbp1Q6P7W2 Gm25541-201ENSMUST00000116888 126 ntBASIC1.22□□□□□ -2.21
Shkbp1Q6P7W2 Gm22541-201ENSMUST00000158165 127 ntBASIC1.22□□□□□ -2.21
Shkbp1Q6P7W2 Mir1954-201ENSMUST00000175595 86 ntBASIC1.22□□□□□ -2.21
Shkbp1Q6P7W2 Gm20305-201ENSMUST00000193226 177 ntBASIC1.22□□□□□ -2.21
Shkbp1Q6P7W2 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.22□□□□□ -2.21
Shkbp1Q6P7W2 Gm25609-201ENSMUST00000104019 104 ntBASIC1.21□□□□□ -2.22
Shkbp1Q6P7W2 Gm22786-201ENSMUST00000104086 122 ntBASIC1.21□□□□□ -2.22
Shkbp1Q6P7W2 Mir1197-201ENSMUST00000117037 120 ntBASIC1.21□□□□□ -2.22
Shkbp1Q6P7W2 Gm25619-201ENSMUST00000122621 104 ntBASIC1.21□□□□□ -2.22
Shkbp1Q6P7W2 Gm25715-201ENSMUST00000158627 125 ntBASIC1.21□□□□□ -2.22
Shkbp1Q6P7W2 Mir7663-201ENSMUST00000183950 61 ntBASIC1.21□□□□□ -2.22
Shkbp1Q6P7W2 Gm26224-201ENSMUST00000082506 80 ntBASIC1.21□□□□□ -2.22
Shkbp1Q6P7W2 Snora75-201ENSMUST00000082903 133 ntBASIC1.21□□□□□ -2.22
Shkbp1Q6P7W2 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.21□□□□□ -2.22
Shkbp1Q6P7W2 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Shkbp1Q6P7W2 Gm24983-201ENSMUST00000104457 69 ntBASIC1.2□□□□□ -2.22
Shkbp1Q6P7W2 Gm23826-201ENSMUST00000157394 119 ntBASIC1.2□□□□□ -2.22
Shkbp1Q6P7W2 Gm25366-201ENSMUST00000158845 124 ntBASIC1.2□□□□□ -2.22
Shkbp1Q6P7W2 Gm22466-201ENSMUST00000175278 69 ntBASIC1.2□□□□□ -2.22
Shkbp1Q6P7W2 Mir8119-201ENSMUST00000183371 129 ntBASIC1.2□□□□□ -2.22
Shkbp1Q6P7W2 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.2□□□□□ -2.22
Shkbp1Q6P7W2 Gm24865-201ENSMUST00000103246 96 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 163 ms