Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm43038-201ENSMUST00000202359 88 ntBASIC1.52□□□□□ -2.17
Trim28Q62318 Gm24865-201ENSMUST00000103246 96 ntBASIC1.51□□□□□ -2.17
Trim28Q62318 Gm25756-201ENSMUST00000103990 136 ntBASIC1.51□□□□□ -2.17
Trim28Q62318 Gm24379-201ENSMUST00000122695 86 ntBASIC1.51□□□□□ -2.17
Trim28Q62318 Gm24728-201ENSMUST00000158226 125 ntBASIC1.51□□□□□ -2.17
Trim28Q62318 Mir3061-201ENSMUST00000175129 91 ntBASIC1.51□□□□□ -2.17
Trim28Q62318 Gm22809-201ENSMUST00000082743 156 ntBASIC1.51□□□□□ -2.17
Trim28Q62318 Snord60-201ENSMUST00000082834 78 ntBASIC1.51□□□□□ -2.17
Trim28Q62318 Mir544-201ENSMUST00000103813 78 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Gm12469-201ENSMUST00000117623 207 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Gm23329-201ENSMUST00000157415 108 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Gm23106-201ENSMUST00000157554 101 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Gm24942-201ENSMUST00000158328 114 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Gm22914-201ENSMUST00000175195 77 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Gm22413-201ENSMUST00000175465 85 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Gm25870-201ENSMUST00000179845 79 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Mir468-201ENSMUST00000197332 78 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Gm25798-201ENSMUST00000082641 107 ntBASIC1.5□□□□□ -2.17
Trim28Q62318 Gm11111-201ENSMUST00000112956 99 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trim28Q62318 Gm25619-201ENSMUST00000122621 104 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Gm24378-201ENSMUST00000122699 106 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Snord13-201ENSMUST00000157627 104 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Gm24009-201ENSMUST00000157734 93 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Gm26089-201ENSMUST00000157898 107 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Gm26359-201ENSMUST00000158873 101 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Gm23419-201ENSMUST00000175523 84 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Mir3064-201ENSMUST00000175532 67 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Mir6240-201ENSMUST00000184281 117 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trim28Q62318 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Gm22980-201ENSMUST00000082608 70 ntBASIC1.49□□□□□ -2.17
Trim28Q62318 Gm24648-201ENSMUST00000157111 132 ntBASIC1.48□□□□□ -2.17
Trim28Q62318 Gm23857-201ENSMUST00000158379 111 ntBASIC1.48□□□□□ -2.17
Trim28Q62318 Gm22164-201ENSMUST00000158413 106 ntBASIC1.48□□□□□ -2.17
Trim28Q62318 Gm25715-201ENSMUST00000158627 125 ntBASIC1.48□□□□□ -2.17
Trim28Q62318 Mir6390-201ENSMUST00000184405 129 ntBASIC1.48□□□□□ -2.17
Trim28Q62318 Gm28435-201ENSMUST00000185496 108 ntBASIC1.48□□□□□ -2.17
Trim28Q62318 Gm29047-201ENSMUST00000189816 108 ntBASIC1.48□□□□□ -2.17
Trim28Q62318 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.48□□□□□ -2.17
Trim28Q62318 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.48□□□□□ -2.17
Trim28Q62318 Gm25650-201ENSMUST00000083784 162 ntBASIC1.48□□□□□ -2.17
Trim28Q62318 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Trim28Q62318 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Trim28Q62318 Gm26158-201ENSMUST00000158973 119 ntBASIC1.47□□□□□ -2.17
Trim28Q62318 Gm24331-201ENSMUST00000175099 67 ntBASIC1.47□□□□□ -2.17
Trim28Q62318 Gm23801-201ENSMUST00000175561 67 ntBASIC1.47□□□□□ -2.17
Trim28Q62318 Gm24485-201ENSMUST00000178283 67 ntBASIC1.47□□□□□ -2.17
Trim28Q62318 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trim28Q62318 Mir7052-201ENSMUST00000184821 65 ntBASIC1.47□□□□□ -2.17
Trim28Q62318 Gm44948-201ENSMUST00000209050 149 ntBASIC1.47□□□□□ -2.17
Trim28Q62318 Snord1a-201ENSMUST00000083160 74 ntBASIC1.47□□□□□ -2.17
Trim28Q62318 Gm22753-201ENSMUST00000083657 107 ntBASIC1.47□□□□□ -2.17
Trim28Q62318 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trim28Q62318 Traj34-201ENSMUST00000103707 58 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trim28Q62318 Gm12432-201ENSMUST00000119540 186 ntBASIC1.46□□□□□ -2.18
Trim28Q62318 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.46□□□□□ -2.18
Trim28Q62318 Gm22862-201ENSMUST00000178593 121 ntBASIC1.46□□□□□ -2.18
Trim28Q62318 Mir6381-201ENSMUST00000183426 87 ntBASIC1.46□□□□□ -2.18
Trim28Q62318 Gm27711-201ENSMUST00000183802 118 ntBASIC1.46□□□□□ -2.18
Trim28Q62318 Gm44483-201ENSMUST00000197203 97 ntBASIC1.46□□□□□ -2.18
Trim28Q62318 Snord96a-201ENSMUST00000082791 81 ntBASIC1.46□□□□□ -2.18
Trim28Q62318 Gm25495-201ENSMUST00000104431 131 ntBASIC1.45□□□□□ -2.18
Trim28Q62318 Gm25056-201ENSMUST00000157372 62 ntBASIC1.45□□□□□ -2.18
Trim28Q62318 Gm25600-201ENSMUST00000158357 106 ntBASIC1.45□□□□□ -2.18
Trim28Q62318 Gm25768-201ENSMUST00000158570 98 ntBASIC1.45□□□□□ -2.18
Trim28Q62318 Gm22203-201ENSMUST00000158605 58 ntBASIC1.45□□□□□ -2.18
Trim28Q62318 Gm21836-201ENSMUST00000178787 63 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trim28Q62318 Mir8119-201ENSMUST00000183371 129 ntBASIC1.45□□□□□ -2.18
Trim28Q62318 Gm26301-201ENSMUST00000104813 95 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm25622-201ENSMUST00000157217 104 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm23856-201ENSMUST00000158380 99 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm25974-201ENSMUST00000158701 94 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm24221-201ENSMUST00000158833 313 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm22929-201ENSMUST00000175517 107 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm44488-201ENSMUST00000199467 119 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm24624-201ENSMUST00000082617 164 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm26202-201ENSMUST00000082910 65 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm23245-201ENSMUST00000083370 135 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.44□□□□□ -2.18
Trim28Q62318 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.43□□□□□ -2.18
Trim28Q62318 Gm24476-201ENSMUST00000157437 131 ntBASIC1.43□□□□□ -2.18
Trim28Q62318 Gm10548-202ENSMUST00000165672 272 ntBASIC1.43□□□□□ -2.18
Trim28Q62318 Traj60-201ENSMUST00000167781 54 ntBASIC1.43□□□□□ -2.18
Trim28Q62318 Mir7663-201ENSMUST00000183950 61 ntBASIC1.43□□□□□ -2.18
Trim28Q62318 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.43□□□□□ -2.18
Trim28Q62318 Mir126a-201ENSMUST00000083606 73 ntBASIC1.43□□□□□ -2.18
Trim28Q62318 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.43□□□□□ -2.18
Trim28Q62318 Gm23328-201ENSMUST00000157418 132 ntBASIC1.42□□□□□ -2.18
Trim28Q62318 Gm25552-201ENSMUST00000158081 91 ntBASIC1.42□□□□□ -2.18
Trim28Q62318 Mir22-201ENSMUST00000083595 95 ntBASIC1.42□□□□□ -2.18
Trim28Q62318 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trim28Q62318 Mir216b-201ENSMUST00000102363 86 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm22785-201ENSMUST00000104087 132 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm25110-201ENSMUST00000116684 121 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm25775-201ENSMUST00000116716 121 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm24795-201ENSMUST00000116737 121 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm25171-201ENSMUST00000116926 121 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm11857-201ENSMUST00000119817 324 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm24129-201ENSMUST00000158537 97 ntBASIC1.41□□□□□ -2.18
Trim28Q62318 Gm24226-201ENSMUST00000158826 97 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 219.2 ms