Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm22962-201ENSMUST00000157962 73 ntBASIC-0.14□□□□□ -2.43
Usp28Q5I043 Gm27928-201ENSMUST00000183747 256 ntBASIC-0.14□□□□□ -2.43
Usp28Q5I043 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Gm25623-201ENSMUST00000157216 108 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Snord2-201ENSMUST00000157899 69 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Gm25014-201ENSMUST00000158401 103 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Gm24842-201ENSMUST00000158681 54 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Gm26007-201ENSMUST00000158798 120 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Gm22638-201ENSMUST00000179674 107 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Gm27851-201ENSMUST00000183529 63 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Gm23239-201ENSMUST00000083006 181 ntBASIC-0.15□□□□□ -2.43
Usp28Q5I043 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.16□□□□□ -2.44
Usp28Q5I043 Gm24263-201ENSMUST00000104059 107 ntBASIC-0.16□□□□□ -2.44
Usp28Q5I043 Gm23065-201ENSMUST00000158236 130 ntBASIC-0.16□□□□□ -2.44
Usp28Q5I043 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.16□□□□□ -2.44
Usp28Q5I043 Gm25635-201ENSMUST00000082675 131 ntBASIC-0.16□□□□□ -2.44
Usp28Q5I043 Gm23722-201ENSMUST00000083002 130 ntBASIC-0.16□□□□□ -2.44
Usp28Q5I043 Gm22196-201ENSMUST00000116865 109 ntBASIC-0.17□□□□□ -2.44
Usp28Q5I043 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.17□□□□□ -2.44
Usp28Q5I043 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.17□□□□□ -2.44
Usp28Q5I043 Gm26062-201ENSMUST00000083379 107 ntBASIC-0.17□□□□□ -2.44
Usp28Q5I043 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.18□□□□□ -2.44
Usp28Q5I043 Gm22503-201ENSMUST00000158983 115 ntBASIC-0.18□□□□□ -2.44
Usp28Q5I043 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.18□□□□□ -2.44
Usp28Q5I043 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.18□□□□□ -2.44
Usp28Q5I043 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.18□□□□□ -2.44
Usp28Q5I043 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Gm23384-201ENSMUST00000158593 103 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Gm25618-201ENSMUST00000179484 107 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Gm26712-201ENSMUST00000180813 217 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Gm44322-201ENSMUST00000196830 115 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Snord80-201ENSMUST00000083801 81 ntBASIC-0.19□□□□□ -2.44
Usp28Q5I043 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.2□□□□□ -2.44
Usp28Q5I043 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.2□□□□□ -2.44
Usp28Q5I043 Gm26498-201ENSMUST00000177799 79 ntBASIC-0.2□□□□□ -2.44
Usp28Q5I043 Gm26230-201ENSMUST00000180141 79 ntBASIC-0.2□□□□□ -2.44
Usp28Q5I043 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.2□□□□□ -2.44
Usp28Q5I043 Gm25081-201ENSMUST00000082534 108 ntBASIC-0.2□□□□□ -2.44
Usp28Q5I043 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.2□□□□□ -2.44
Usp28Q5I043 Gm23344-201ENSMUST00000083818 68 ntBASIC-0.2□□□□□ -2.44
Usp28Q5I043 Gm22336-201ENSMUST00000157719 107 ntBASIC-0.21□□□□□ -2.44
Usp28Q5I043 Gm44470-201ENSMUST00000203913 142 ntBASIC-0.21□□□□□ -2.44
Usp28Q5I043 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.22□□□□□ -2.44
Usp28Q5I043 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.22□□□□□ -2.44
Usp28Q5I043 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.22□□□□□ -2.44
Usp28Q5I043 Gm27699-201ENSMUST00000183553 180 ntBASIC-0.22□□□□□ -2.44
Usp28Q5I043 Mir191-201ENSMUST00000196210 74 ntBASIC-0.22□□□□□ -2.44
Usp28Q5I043 Gm23507-201ENSMUST00000083078 107 ntBASIC-0.22□□□□□ -2.44
Usp28Q5I043 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.23□□□□□ -2.45
Usp28Q5I043 Gm22212-201ENSMUST00000158096 106 ntBASIC-0.23□□□□□ -2.45
Usp28Q5I043 Gm22838-201ENSMUST00000158437 99 ntBASIC-0.23□□□□□ -2.45
Usp28Q5I043 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.23□□□□□ -2.45
Usp28Q5I043 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.23□□□□□ -2.45
Usp28Q5I043 Mir6915-201ENSMUST00000198839 69 ntBASIC-0.23□□□□□ -2.45
Usp28Q5I043 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.23□□□□□ -2.45
Usp28Q5I043 Mir141-201ENSMUST00000083540 72 ntBASIC-0.23□□□□□ -2.45
Usp28Q5I043 Mir214-201ENSMUST00000083582 110 ntBASIC-0.23□□□□□ -2.45
Usp28Q5I043 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.24□□□□□ -2.45
Usp28Q5I043 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.24□□□□□ -2.45
Usp28Q5I043 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.24□□□□□ -2.45
Usp28Q5I043 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.24□□□□□ -2.45
Usp28Q5I043 Gm43324-201ENSMUST00000197482 289 ntBASIC-0.24□□□□□ -2.45
Usp28Q5I043 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-0.24□□□□□ -2.45
Usp28Q5I043 Mir327-201ENSMUST00000199328 69 ntBASIC-0.24□□□□□ -2.45
Usp28Q5I043 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
Usp28Q5I043 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.25□□□□□ -2.45
Usp28Q5I043 AL929417.1-201ENSMUST00000214901 124 ntBASIC-0.25□□□□□ -2.45
Usp28Q5I043 Gm26438-201ENSMUST00000082593 107 ntBASIC-0.25□□□□□ -2.45
Usp28Q5I043 Mir29a-201ENSMUST00000083676 88 ntBASIC-0.25□□□□□ -2.45
Usp28Q5I043 Snord78-201ENSMUST00000104032 66 ntBASIC-0.26□□□□□ -2.45
Usp28Q5I043 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.26□□□□□ -2.45
Usp28Q5I043 Gm26337-201ENSMUST00000178000 79 ntBASIC-0.26□□□□□ -2.45
Usp28Q5I043 Gm25337-201ENSMUST00000083723 104 ntBASIC-0.26□□□□□ -2.45
Usp28Q5I043 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.27□□□□□ -2.45
Usp28Q5I043 Gm22319-201ENSMUST00000157147 122 ntBASIC-0.27□□□□□ -2.45
Usp28Q5I043 Gm25370-201ENSMUST00000158159 94 ntBASIC-0.27□□□□□ -2.45
Usp28Q5I043 Gm22203-201ENSMUST00000158605 58 ntBASIC-0.27□□□□□ -2.45
Usp28Q5I043 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.27□□□□□ -2.45
Usp28Q5I043 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.27□□□□□ -2.45
Usp28Q5I043 Gm44375-201ENSMUST00000196657 150 ntBASIC-0.27□□□□□ -2.45
Usp28Q5I043 AC165138.1-201ENSMUST00000226984 270 ntBASIC-0.27□□□□□ -2.45
Usp28Q5I043 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.27□□□□□ -2.45
Usp28Q5I043 Snord64-201ENSMUST00000104003 67 ntBASIC-0.28□□□□□ -2.45
Usp28Q5I043 Gm26478-201ENSMUST00000122611 133 ntBASIC-0.28□□□□□ -2.45
Usp28Q5I043 Gm22558-201ENSMUST00000157326 95 ntBASIC-0.28□□□□□ -2.45
Usp28Q5I043 Gm25887-201ENSMUST00000157777 84 ntBASIC-0.28□□□□□ -2.45
Usp28Q5I043 Gm23922-201ENSMUST00000178792 79 ntBASIC-0.28□□□□□ -2.45
Usp28Q5I043 Gm24657-201ENSMUST00000180085 79 ntBASIC-0.28□□□□□ -2.45
Usp28Q5I043 Gm22996-201ENSMUST00000180236 79 ntBASIC-0.28□□□□□ -2.45
Usp28Q5I043 Gm38298-201ENSMUST00000193578 118 ntBASIC-0.28□□□□□ -2.45
Usp28Q5I043 AC164561.1-201ENSMUST00000220414 115 ntBASIC-0.28□□□□□ -2.45
Usp28Q5I043 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-0.29□□□□□ -2.46
Usp28Q5I043 Gm12086-201ENSMUST00000120863 228 ntBASIC-0.29□□□□□ -2.46
Usp28Q5I043 Gm22542-201ENSMUST00000158166 95 ntBASIC-0.29□□□□□ -2.46
Usp28Q5I043 Gm26291-201ENSMUST00000158889 137 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 76,532 protein–RNA pairs in 251.5 ms