Protein–RNA interactions for Protein: Q3US59

Gm28047, Predicted gene, 28047, mousemouse

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28047Q3US59 Mir7241-201ENSMUST00000184532 64 ntBASIC2.04□□□□□ -2.08
Gm28047Q3US59 Mir7678-201ENSMUST00000185076 71 ntBASIC2.04□□□□□ -2.08
Gm28047Q3US59 CT485608.2-201ENSMUST00000227210 291 ntBASIC2.04□□□□□ -2.08
Gm28047Q3US59 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Gm28047Q3US59 Gm22551-201ENSMUST00000157795 103 ntBASIC2.03□□□□□ -2.08
Gm28047Q3US59 Gm25836-201ENSMUST00000158918 123 ntBASIC2.03□□□□□ -2.08
Gm28047Q3US59 Gm25641-201ENSMUST00000175135 108 ntBASIC2.03□□□□□ -2.08
Gm28047Q3US59 Gm24580-201ENSMUST00000103965 131 ntBASIC2.02□□□□□ -2.09
Gm28047Q3US59 Gm23881-201ENSMUST00000116872 66 ntBASIC2.02□□□□□ -2.09
Gm28047Q3US59 Gm24073-201ENSMUST00000158177 106 ntBASIC2.02□□□□□ -2.09
Gm28047Q3US59 Gm25366-201ENSMUST00000158845 124 ntBASIC2.02□□□□□ -2.09
Gm28047Q3US59 Gm26922-201ENSMUST00000082687 72 ntBASIC2.02□□□□□ -2.09
Gm28047Q3US59 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC2.01□□□□□ -2.09
Gm28047Q3US59 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.01□□□□□ -2.09
Gm28047Q3US59 Gm23469-201ENSMUST00000157131 104 ntBASIC2.01□□□□□ -2.09
Gm28047Q3US59 Gm22965-201ENSMUST00000157958 101 ntBASIC2.01□□□□□ -2.09
Gm28047Q3US59 Gm25974-201ENSMUST00000158701 94 ntBASIC2.01□□□□□ -2.09
Gm28047Q3US59 Gm6607-201ENSMUST00000215035 328 ntBASIC2.01□□□□□ -2.09
Gm28047Q3US59 Gm24151-201ENSMUST00000082758 141 ntBASIC2.01□□□□□ -2.09
Gm28047Q3US59 Snord60-201ENSMUST00000082834 78 ntBASIC2.01□□□□□ -2.09
Gm28047Q3US59 Gm26202-201ENSMUST00000082910 65 ntBASIC2.01□□□□□ -2.09
Gm28047Q3US59 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2□□□□□ -2.09
Gm28047Q3US59 Mir8116-201ENSMUST00000184134 97 ntBASIC2□□□□□ -2.09
Gm28047Q3US59 Mir7673-201ENSMUST00000184567 64 ntBASIC2□□□□□ -2.09
Gm28047Q3US59 Gm24208-201ENSMUST00000082783 135 ntBASIC2□□□□□ -2.09
Gm28047Q3US59 Gm24523-201ENSMUST00000083965 132 ntBASIC2□□□□□ -2.09
Gm28047Q3US59 Gm23109-201ENSMUST00000116867 126 ntBASIC1.99□□□□□ -2.09
Gm28047Q3US59 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC1.99□□□□□ -2.09
Gm28047Q3US59 Snord87-201ENSMUST00000175437 87 ntBASIC1.99□□□□□ -2.09
Gm28047Q3US59 Gm27937-201ENSMUST00000183605 88 ntBASIC1.99□□□□□ -2.09
Gm28047Q3US59 Mir6388-201ENSMUST00000184417 75 ntBASIC1.99□□□□□ -2.09
Gm28047Q3US59 Snora3-201ENSMUST00000083082 132 ntBASIC1.99□□□□□ -2.09
Gm28047Q3US59 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Gm28047Q3US59 Gm25600-201ENSMUST00000158357 106 ntBASIC1.98□□□□□ -2.09
Gm28047Q3US59 Gm25522-201ENSMUST00000158394 105 ntBASIC1.98□□□□□ -2.09
Gm28047Q3US59 Gm22200-201ENSMUST00000158614 67 ntBASIC1.98□□□□□ -2.09
Gm28047Q3US59 Gm20477-201ENSMUST00000174028 280 ntBASIC1.98□□□□□ -2.09
Gm28047Q3US59 Mir7683-201ENSMUST00000183842 61 ntBASIC1.98□□□□□ -2.09
Gm28047Q3US59 Mir7231-201ENSMUST00000196252 61 ntBASIC1.98□□□□□ -2.09
Gm28047Q3US59 Gm22459-201ENSMUST00000082577 108 ntBASIC1.98□□□□□ -2.09
Gm28047Q3US59 Mir216b-201ENSMUST00000102363 86 ntBASIC1.97□□□□□ -2.09
Gm28047Q3US59 Gm23172-201ENSMUST00000157160 124 ntBASIC1.97□□□□□ -2.09
Gm28047Q3US59 Gm24394-201ENSMUST00000158141 123 ntBASIC1.97□□□□□ -2.09
Gm28047Q3US59 Gm24677-201ENSMUST00000158755 150 ntBASIC1.97□□□□□ -2.09
Gm28047Q3US59 Gm27511-201ENSMUST00000183502 127 ntBASIC1.97□□□□□ -2.09
Gm28047Q3US59 Mir3087-201ENSMUST00000199405 56 ntBASIC1.97□□□□□ -2.09
Gm28047Q3US59 Gm26491-201ENSMUST00000179268 121 ntBASIC1.96□□□□□ -2.1
Gm28047Q3US59 Snora75-201ENSMUST00000082903 133 ntBASIC1.96□□□□□ -2.1
Gm28047Q3US59 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.95□□□□□ -2.1
Gm28047Q3US59 U6.1-201ENSMUST00000157443 101 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 Gm24076-201ENSMUST00000158179 94 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 Gm24129-201ENSMUST00000158537 97 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 Gm23180-201ENSMUST00000158686 125 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 Gm25838-201ENSMUST00000158920 120 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 Mir3098-201ENSMUST00000175416 87 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 Mir6995-201ENSMUST00000183658 71 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 Gm29432-201ENSMUST00000185397 139 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 Gm43907-201ENSMUST00000203128 117 ntBASIC1.95□□□□□ -2.1
Gm28047Q3US59 Gm23500-201ENSMUST00000157735 98 ntBASIC1.94□□□□□ -2.1
Gm28047Q3US59 Gm25768-201ENSMUST00000158570 98 ntBASIC1.94□□□□□ -2.1
Gm28047Q3US59 Gm22016-201ENSMUST00000158793 114 ntBASIC1.94□□□□□ -2.1
Gm28047Q3US59 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Gm28047Q3US59 Cyp2j7-ps1-201ENSMUST00000122430 173 ntBASIC1.93□□□□□ -2.1
Gm28047Q3US59 Gm23787-201ENSMUST00000122538 73 ntBASIC1.93□□□□□ -2.1
Gm28047Q3US59 Gm25279-201ENSMUST00000122608 133 ntBASIC1.93□□□□□ -2.1
Gm28047Q3US59 Gm24728-201ENSMUST00000158226 125 ntBASIC1.93□□□□□ -2.1
Gm28047Q3US59 Gm23857-201ENSMUST00000158379 111 ntBASIC1.93□□□□□ -2.1
Gm28047Q3US59 Gm25730-201ENSMUST00000178753 165 ntBASIC1.93□□□□□ -2.1
Gm28047Q3US59 Gm22746-201ENSMUST00000082494 107 ntBASIC1.92□□□□□ -2.1
Gm28047Q3US59 Gm25132-201ENSMUST00000082652 107 ntBASIC1.92□□□□□ -2.1
Gm28047Q3US59 Gm22301-201ENSMUST00000082656 107 ntBASIC1.92□□□□□ -2.1
Gm28047Q3US59 Gm23100-201ENSMUST00000083455 141 ntBASIC1.92□□□□□ -2.1
Gm28047Q3US59 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Gm28047Q3US59 Gm23573-201ENSMUST00000104408 107 ntBASIC1.91□□□□□ -2.1
Gm28047Q3US59 Gm23336-201ENSMUST00000117023 123 ntBASIC1.91□□□□□ -2.1
Gm28047Q3US59 Gm22788-201ENSMUST00000157876 61 ntBASIC1.91□□□□□ -2.1
Gm28047Q3US59 Gm22887-201ENSMUST00000178586 107 ntBASIC1.91□□□□□ -2.1
Gm28047Q3US59 Mir7679-201ENSMUST00000183379 63 ntBASIC1.91□□□□□ -2.1
Gm28047Q3US59 Gm25326-201ENSMUST00000101903 107 ntBASIC1.9□□□□□ -2.11
Gm28047Q3US59 Gm11084-201ENSMUST00000112062 69 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Gm28047Q3US59 Gm24366-201ENSMUST00000175383 86 ntBASIC1.9□□□□□ -2.11
Gm28047Q3US59 Gm24638-201ENSMUST00000179807 132 ntBASIC1.9□□□□□ -2.11
Gm28047Q3US59 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.9□□□□□ -2.11
Gm28047Q3US59 Mir223-201ENSMUST00000102112 110 ntBASIC1.89□□□□□ -2.11
Gm28047Q3US59 Mir301b-201ENSMUST00000102333 97 ntBASIC1.89□□□□□ -2.11
Gm28047Q3US59 Gm24915-201ENSMUST00000157288 78 ntBASIC1.89□□□□□ -2.11
Gm28047Q3US59 Gm24400-201ENSMUST00000157865 107 ntBASIC1.89□□□□□ -2.11
Gm28047Q3US59 Gm10548-202ENSMUST00000165672 272 ntBASIC1.89□□□□□ -2.11
Gm28047Q3US59 Gm25035-201ENSMUST00000175414 77 ntBASIC1.89□□□□□ -2.11
Gm28047Q3US59 Gm25802-201ENSMUST00000082639 77 ntBASIC1.89□□□□□ -2.11
Gm28047Q3US59 Mir3071-201ENSMUST00000093621 80 ntBASIC1.89□□□□□ -2.11
Gm28047Q3US59 Gm22595-201ENSMUST00000104250 130 ntBASIC1.88□□□□□ -2.11
Gm28047Q3US59 Gm27248-201ENSMUST00000184004 166 ntBASIC1.88□□□□□ -2.11
Gm28047Q3US59 Gm44469-201ENSMUST00000198558 79 ntBASIC1.88□□□□□ -2.11
Gm28047Q3US59 Gm24459-201ENSMUST00000082730 86 ntBASIC1.88□□□□□ -2.11
Gm28047Q3US59 Gm23347-201ENSMUST00000083823 82 ntBASIC1.88□□□□□ -2.11
Gm28047Q3US59 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Gm28047Q3US59 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Gm28047Q3US59 Gm26181-201ENSMUST00000157687 106 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 182.3 ms