Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm25775-201ENSMUST00000116716 121 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm24795-201ENSMUST00000116737 121 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm25171-201ENSMUST00000116926 121 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm26038-201ENSMUST00000158151 106 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm24547-201ENSMUST00000158649 149 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm26158-201ENSMUST00000158973 119 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm36956-201ENSMUST00000193830 214 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm43038-201ENSMUST00000202359 88 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm23376-201ENSMUST00000082938 160 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm23570-201ENSMUST00000083029 104 ntBASIC1.3□□□□□ -2.2
Usp39Q3TIX9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm22164-201ENSMUST00000158413 106 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Mir3098-201ENSMUST00000175416 87 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm25936-201ENSMUST00000179952 114 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm27297-201ENSMUST00000183395 105 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm44396-201ENSMUST00000199843 114 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm25798-201ENSMUST00000082641 107 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm26207-201ENSMUST00000082909 104 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm22753-201ENSMUST00000083657 107 ntBASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Usp39Q3TIX9 Gm12432-201ENSMUST00000119540 186 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Gm11857-201ENSMUST00000119817 324 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Gm25964-201ENSMUST00000157171 97 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Gm23328-201ENSMUST00000157418 132 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Mir1961-201ENSMUST00000158643 112 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Gm24677-201ENSMUST00000158755 150 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Gm25160-201ENSMUST00000158914 102 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Gm24495-201ENSMUST00000178575 79 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Gm22253-201ENSMUST00000179870 79 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Gm44488-201ENSMUST00000199467 119 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.28□□□□□ -2.2
Usp39Q3TIX9 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Usp39Q3TIX9 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.27□□□□□ -2.21
Usp39Q3TIX9 Gm24208-201ENSMUST00000082783 135 ntBASIC1.27□□□□□ -2.21
Usp39Q3TIX9 Mir448-201ENSMUST00000083516 112 ntBASIC1.27□□□□□ -2.21
Usp39Q3TIX9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.26□□□□□ -2.21
Usp39Q3TIX9 Mir216b-201ENSMUST00000102363 86 ntBASIC1.26□□□□□ -2.21
Usp39Q3TIX9 Gm25170-201ENSMUST00000104191 129 ntBASIC1.26□□□□□ -2.21
Usp39Q3TIX9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.26□□□□□ -2.21
Usp39Q3TIX9 Gm20305-201ENSMUST00000193226 177 ntBASIC1.26□□□□□ -2.21
Usp39Q3TIX9 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.26□□□□□ -2.21
Usp39Q3TIX9 Gm22785-201ENSMUST00000104087 132 ntBASIC1.25□□□□□ -2.21
Usp39Q3TIX9 Gm25274-201ENSMUST00000104296 135 ntBASIC1.25□□□□□ -2.21
Usp39Q3TIX9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.25□□□□□ -2.21
Usp39Q3TIX9 Gm25056-201ENSMUST00000157372 62 ntBASIC1.25□□□□□ -2.21
Usp39Q3TIX9 Gm23761-201ENSMUST00000158347 104 ntBASIC1.25□□□□□ -2.21
Usp39Q3TIX9 Gm23339-201ENSMUST00000158962 139 ntBASIC1.25□□□□□ -2.21
Usp39Q3TIX9 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.25□□□□□ -2.21
Usp39Q3TIX9 Mir7052-201ENSMUST00000184821 65 ntBASIC1.25□□□□□ -2.21
Usp39Q3TIX9 Mir709-201ENSMUST00000102190 88 ntBASIC1.24□□□□□ -2.21
Usp39Q3TIX9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.24□□□□□ -2.21
Usp39Q3TIX9 Gm26301-201ENSMUST00000104813 95 ntBASIC1.24□□□□□ -2.21
Usp39Q3TIX9 Gm22030-201ENSMUST00000116942 63 ntBASIC1.24□□□□□ -2.21
Usp39Q3TIX9 Gm22095-201ENSMUST00000158984 150 ntBASIC1.24□□□□□ -2.21
Usp39Q3TIX9 Gm28435-201ENSMUST00000185496 108 ntBASIC1.24□□□□□ -2.21
Usp39Q3TIX9 Gm29047-201ENSMUST00000189816 108 ntBASIC1.24□□□□□ -2.21
Usp39Q3TIX9 Snord71-201ENSMUST00000104361 85 ntBASIC1.23□□□□□ -2.21
Usp39Q3TIX9 Gm26089-201ENSMUST00000157898 107 ntBASIC1.23□□□□□ -2.21
Usp39Q3TIX9 Gm26499-201ENSMUST00000178544 79 ntBASIC1.23□□□□□ -2.21
Usp39Q3TIX9 Gm26096-201ENSMUST00000179084 79 ntBASIC1.23□□□□□ -2.21
Usp39Q3TIX9 Gm25354-201ENSMUST00000179110 105 ntBASIC1.23□□□□□ -2.21
Usp39Q3TIX9 Gm25870-201ENSMUST00000179845 79 ntBASIC1.23□□□□□ -2.21
Usp39Q3TIX9 Gm27656-201ENSMUST00000185055 80 ntBASIC1.23□□□□□ -2.21
Usp39Q3TIX9 Gm24865-201ENSMUST00000103246 96 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Gm23203-201ENSMUST00000104374 107 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Gm24290-201ENSMUST00000157634 96 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Gm23114-201ENSMUST00000158478 117 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Gm22663-201ENSMUST00000158721 102 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Gm25693-201ENSMUST00000175443 85 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Mir1954-201ENSMUST00000175595 86 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Gm27993-201ENSMUST00000184362 85 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Gm23245-201ENSMUST00000083370 135 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Mir211-201ENSMUST00000083651 106 ntBASIC1.22□□□□□ -2.21
Usp39Q3TIX9 Gm22786-201ENSMUST00000104086 122 ntBASIC1.21□□□□□ -2.22
Usp39Q3TIX9 Gm23826-201ENSMUST00000157394 119 ntBASIC1.21□□□□□ -2.22
Usp39Q3TIX9 Mir1933-201ENSMUST00000158930 88 ntBASIC1.21□□□□□ -2.22
Usp39Q3TIX9 Gm25950-201ENSMUST00000175331 100 ntBASIC1.21□□□□□ -2.22
Usp39Q3TIX9 Gm23291-201ENSMUST00000175611 78 ntBASIC1.21□□□□□ -2.22
Usp39Q3TIX9 Gm23306-201ENSMUST00000179058 105 ntBASIC1.21□□□□□ -2.22
Usp39Q3TIX9 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.21□□□□□ -2.22
Usp39Q3TIX9 Gm23130-201ENSMUST00000104252 74 ntBASIC1.2□□□□□ -2.22
Usp39Q3TIX9 Gm25619-201ENSMUST00000122621 104 ntBASIC1.2□□□□□ -2.22
Usp39Q3TIX9 Gm25622-201ENSMUST00000157217 104 ntBASIC1.2□□□□□ -2.22
Usp39Q3TIX9 Gm26359-201ENSMUST00000158873 101 ntBASIC1.2□□□□□ -2.22
Usp39Q3TIX9 Snord96a-201ENSMUST00000082791 81 ntBASIC1.2□□□□□ -2.22
Usp39Q3TIX9 Gm24202-201ENSMUST00000082948 103 ntBASIC1.2□□□□□ -2.22
Usp39Q3TIX9 Mir200b-201ENSMUST00000083615 70 ntBASIC1.2□□□□□ -2.22
Usp39Q3TIX9 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.19□□□□□ -2.22
Usp39Q3TIX9 Gm23785-201ENSMUST00000116741 96 ntBASIC1.19□□□□□ -2.22
Usp39Q3TIX9 Gm22788-201ENSMUST00000157876 61 ntBASIC1.19□□□□□ -2.22
Usp39Q3TIX9 Gm44490-201ENSMUST00000198566 127 ntBASIC1.19□□□□□ -2.22
Usp39Q3TIX9 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Usp39Q3TIX9 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
Usp39Q3TIX9 Snord69-201ENSMUST00000104024 80 ntBASIC1.18□□□□□ -2.22
Usp39Q3TIX9 Gm25847-201ENSMUST00000116793 96 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 152.7 ms