Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.43□□□□□ -2.18
Ccbe1Q3MI99 Gm24895-201ENSMUST00000122742 74 ntBASIC1.43□□□□□ -2.18
Ccbe1Q3MI99 Gm24009-201ENSMUST00000157734 93 ntBASIC1.43□□□□□ -2.18
Ccbe1Q3MI99 Gm23967-201ENSMUST00000175062 78 ntBASIC1.43□□□□□ -2.18
Ccbe1Q3MI99 Gm22914-201ENSMUST00000175195 77 ntBASIC1.43□□□□□ -2.18
Ccbe1Q3MI99 Gm22887-201ENSMUST00000178586 107 ntBASIC1.43□□□□□ -2.18
Ccbe1Q3MI99 Snord96a-201ENSMUST00000082791 81 ntBASIC1.43□□□□□ -2.18
Ccbe1Q3MI99 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.43□□□□□ -2.18
Ccbe1Q3MI99 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Ccbe1Q3MI99 Gm24379-201ENSMUST00000122695 86 ntBASIC1.42□□□□□ -2.18
Ccbe1Q3MI99 Gm23339-201ENSMUST00000158962 139 ntBASIC1.42□□□□□ -2.18
Ccbe1Q3MI99 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.42□□□□□ -2.18
Ccbe1Q3MI99 Gm22802-201ENSMUST00000175621 89 ntBASIC1.42□□□□□ -2.18
Ccbe1Q3MI99 Gm28862-201ENSMUST00000188246 163 ntBASIC1.42□□□□□ -2.18
Ccbe1Q3MI99 Svbp-204ENSMUST00000210595 150 ntTSL 5 BASIC1.42□□□□□ -2.18
Ccbe1Q3MI99 AC157278.1-201ENSMUST00000221621 148 ntBASIC1.42□□□□□ -2.18
Ccbe1Q3MI99 Mir126a-201ENSMUST00000083606 73 ntBASIC1.42□□□□□ -2.18
Ccbe1Q3MI99 Gm25056-201ENSMUST00000157372 62 ntBASIC1.41□□□□□ -2.18
Ccbe1Q3MI99 Gm24728-201ENSMUST00000158226 125 ntBASIC1.41□□□□□ -2.18
Ccbe1Q3MI99 Gm24547-201ENSMUST00000158649 149 ntBASIC1.41□□□□□ -2.18
Ccbe1Q3MI99 Mir7678-201ENSMUST00000185076 71 ntBASIC1.41□□□□□ -2.18
Ccbe1Q3MI99 Mir494-201ENSMUST00000093632 85 ntBASIC1.41□□□□□ -2.18
Ccbe1Q3MI99 Gm26158-201ENSMUST00000158973 119 ntBASIC1.4□□□□□ -2.19
Ccbe1Q3MI99 Mir3061-201ENSMUST00000175129 91 ntBASIC1.4□□□□□ -2.19
Ccbe1Q3MI99 Gm16399-201ENSMUST00000181423 219 ntBASIC1.4□□□□□ -2.19
Ccbe1Q3MI99 Mir7091-201ENSMUST00000184075 79 ntBASIC1.4□□□□□ -2.19
Ccbe1Q3MI99 Mir7675-201ENSMUST00000184262 58 ntBASIC1.4□□□□□ -2.19
Ccbe1Q3MI99 Trgj1-201ENSMUST00000200495 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Ccbe1Q3MI99 Gm24311-201ENSMUST00000082570 104 ntBASIC1.4□□□□□ -2.19
Ccbe1Q3MI99 Gm26922-201ENSMUST00000082687 72 ntBASIC1.4□□□□□ -2.19
Ccbe1Q3MI99 Gm26202-201ENSMUST00000082910 65 ntBASIC1.4□□□□□ -2.19
Ccbe1Q3MI99 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.39□□□□□ -2.19
Ccbe1Q3MI99 Mir297-1-201ENSMUST00000103800 76 ntBASIC1.39□□□□□ -2.19
Ccbe1Q3MI99 Gm25279-201ENSMUST00000122608 133 ntBASIC1.39□□□□□ -2.19
Ccbe1Q3MI99 Gm24076-201ENSMUST00000158179 94 ntBASIC1.39□□□□□ -2.19
Ccbe1Q3MI99 Gm22164-201ENSMUST00000158413 106 ntBASIC1.39□□□□□ -2.19
Ccbe1Q3MI99 Gm25974-201ENSMUST00000158701 94 ntBASIC1.39□□□□□ -2.19
Ccbe1Q3MI99 Gm22761-201ENSMUST00000102278 96 ntBASIC1.38□□□□□ -2.19
Ccbe1Q3MI99 Gm25991-201ENSMUST00000102439 99 ntBASIC1.38□□□□□ -2.19
Ccbe1Q3MI99 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.38□□□□□ -2.19
Ccbe1Q3MI99 Gm25600-201ENSMUST00000158357 106 ntBASIC1.38□□□□□ -2.19
Ccbe1Q3MI99 Gm24129-201ENSMUST00000158537 97 ntBASIC1.38□□□□□ -2.19
Ccbe1Q3MI99 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.38□□□□□ -2.19
Ccbe1Q3MI99 Gm24401-201ENSMUST00000157868 91 ntBASIC1.37□□□□□ -2.19
Ccbe1Q3MI99 Gm23221-201ENSMUST00000158118 93 ntBASIC1.37□□□□□ -2.19
Ccbe1Q3MI99 Gm23857-201ENSMUST00000158379 111 ntBASIC1.37□□□□□ -2.19
Ccbe1Q3MI99 Gm27297-201ENSMUST00000183395 105 ntBASIC1.37□□□□□ -2.19
Ccbe1Q3MI99 Gm28383-201ENSMUST00000187563 139 ntBASIC1.37□□□□□ -2.19
Ccbe1Q3MI99 Snord45b-201ENSMUST00000082797 71 ntBASIC1.37□□□□□ -2.19
Ccbe1Q3MI99 Gm24202-201ENSMUST00000082948 103 ntBASIC1.37□□□□□ -2.19
Ccbe1Q3MI99 Gm24134-201ENSMUST00000083361 71 ntBASIC1.37□□□□□ -2.19
Ccbe1Q3MI99 Gm25652-201ENSMUST00000083780 103 ntBASIC1.37□□□□□ -2.19
Ccbe1Q3MI99 Mir741-201ENSMUST00000103931 71 ntBASIC1.36□□□□□ -2.19
Ccbe1Q3MI99 Gm22078-201ENSMUST00000157593 103 ntBASIC1.36□□□□□ -2.19
Ccbe1Q3MI99 Gm26181-201ENSMUST00000157687 106 ntBASIC1.36□□□□□ -2.19
Ccbe1Q3MI99 Gm25183-201ENSMUST00000157752 106 ntBASIC1.36□□□□□ -2.19
Ccbe1Q3MI99 Gm10548-202ENSMUST00000165672 272 ntBASIC1.36□□□□□ -2.19
Ccbe1Q3MI99 Gm15115-201ENSMUST00000121145 264 ntBASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 Gm6985-201ENSMUST00000121255 271 ntBASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 Gm25831-201ENSMUST00000158924 163 ntBASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 Gm27549-201ENSMUST00000183508 62 ntBASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 Gm44469-201ENSMUST00000198558 79 ntBASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 Gm24208-201ENSMUST00000082783 135 ntBASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 Gm25128-201ENSMUST00000083339 76 ntBASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Ccbe1Q3MI99 Mir216b-201ENSMUST00000102363 86 ntBASIC1.34□□□□□ -2.19
Ccbe1Q3MI99 Gm27450-201ENSMUST00000104632 90 ntBASIC1.34□□□□□ -2.19
Ccbe1Q3MI99 n-R5s70-201ENSMUST00000122650 116 ntBASIC1.34□□□□□ -2.19
Ccbe1Q3MI99 Gm23106-201ENSMUST00000157554 101 ntBASIC1.34□□□□□ -2.19
Ccbe1Q3MI99 Gm23291-201ENSMUST00000175611 78 ntBASIC1.34□□□□□ -2.19
Ccbe1Q3MI99 Gm23649-201ENSMUST00000179007 107 ntBASIC1.34□□□□□ -2.19
Ccbe1Q3MI99 Mir8119-201ENSMUST00000183371 129 ntBASIC1.34□□□□□ -2.19
Ccbe1Q3MI99 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Ccbe1Q3MI99 Gm22809-201ENSMUST00000082743 156 ntBASIC1.34□□□□□ -2.19
Ccbe1Q3MI99 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm24983-201ENSMUST00000104457 69 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm26257-201ENSMUST00000122500 107 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm22039-201ENSMUST00000157278 132 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm24902-201ENSMUST00000158126 123 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm22203-201ENSMUST00000158605 58 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm25366-201ENSMUST00000158845 124 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm24154-201ENSMUST00000175261 130 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm44948-201ENSMUST00000209050 149 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm24201-201ENSMUST00000082946 125 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm24927-201ENSMUST00000083397 107 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm43885-201ENSMUST00000204928 2542 ntBASIC1.33□□□□□ -2.2
Ccbe1Q3MI99 Gm22785-201ENSMUST00000104087 132 ntBASIC1.32□□□□□ -2.2
Ccbe1Q3MI99 Gm24476-201ENSMUST00000157437 131 ntBASIC1.32□□□□□ -2.2
Ccbe1Q3MI99 Gm23672-201ENSMUST00000157471 107 ntBASIC1.32□□□□□ -2.2
Ccbe1Q3MI99 Gm25958-201ENSMUST00000175114 71 ntBASIC1.32□□□□□ -2.2
Ccbe1Q3MI99 Mir468-201ENSMUST00000197332 78 ntBASIC1.32□□□□□ -2.2
Ccbe1Q3MI99 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.32□□□□□ -2.2
Ccbe1Q3MI99 Gm25650-201ENSMUST00000083784 162 ntBASIC1.32□□□□□ -2.2
Ccbe1Q3MI99 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Ccbe1Q3MI99 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Ccbe1Q3MI99 Mir544-201ENSMUST00000103813 78 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms