Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm44458-201ENSMUST00000196594 143 ntBASIC2.33□□□□□ -2.04
Col9a1Q05722 Gm23100-201ENSMUST00000083455 141 ntBASIC2.33□□□□□ -2.04
Col9a1Q05722 Snora69-201ENSMUST00000083708 131 ntBASIC2.33□□□□□ -2.04
Col9a1Q05722 Gm26259-201ENSMUST00000104778 97 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Gm25110-201ENSMUST00000116684 121 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Gm25775-201ENSMUST00000116716 121 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Gm24795-201ENSMUST00000116737 121 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Gm25171-201ENSMUST00000116926 121 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Gm25648-201ENSMUST00000177844 79 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Gm22862-201ENSMUST00000178593 121 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Gm27549-201ENSMUST00000183508 62 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Gm44488-201ENSMUST00000199467 119 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Snord1a-201ENSMUST00000083160 74 ntBASIC2.32□□□□□ -2.04
Col9a1Q05722 Gm25416-201ENSMUST00000104221 107 ntBASIC2.31□□□□□ -2.04
Col9a1Q05722 Gm26301-201ENSMUST00000104813 95 ntBASIC2.31□□□□□ -2.04
Col9a1Q05722 Gm26277-201ENSMUST00000157097 152 ntBASIC2.31□□□□□ -2.04
Col9a1Q05722 Gm22858-201ENSMUST00000174972 76 ntBASIC2.31□□□□□ -2.04
Col9a1Q05722 Gm25470-201ENSMUST00000175576 111 ntBASIC2.31□□□□□ -2.04
Col9a1Q05722 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col9a1Q05722 Gm23072-201ENSMUST00000158243 123 ntBASIC2.3□□□□□ -2.04
Col9a1Q05722 Mir6352-201ENSMUST00000184495 116 ntBASIC2.3□□□□□ -2.04
Col9a1Q05722 Gm45655-201ENSMUST00000211625 160 ntBASIC2.3□□□□□ -2.04
Col9a1Q05722 Gm26306-201ENSMUST00000157773 119 ntBASIC2.29□□□□□ -2.04
Col9a1Q05722 Gm37557-201ENSMUST00000191640 139 ntBASIC2.29□□□□□ -2.04
Col9a1Q05722 Mir468-201ENSMUST00000197332 78 ntBASIC2.29□□□□□ -2.04
Col9a1Q05722 Gm23172-201ENSMUST00000157160 124 ntBASIC2.28□□□□□ -2.04
Col9a1Q05722 Gm23409-201ENSMUST00000158516 237 ntBASIC2.28□□□□□ -2.04
Col9a1Q05722 Gm24218-201ENSMUST00000180163 105 ntBASIC2.28□□□□□ -2.04
Col9a1Q05722 Gm27656-201ENSMUST00000185055 80 ntBASIC2.28□□□□□ -2.04
Col9a1Q05722 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Col9a1Q05722 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.27□□□□□ -2.05
Col9a1Q05722 Gm24212-201ENSMUST00000158258 132 ntBASIC2.27□□□□□ -2.05
Col9a1Q05722 Gm22203-201ENSMUST00000158605 58 ntBASIC2.27□□□□□ -2.05
Col9a1Q05722 Gm25641-201ENSMUST00000175135 108 ntBASIC2.27□□□□□ -2.05
Col9a1Q05722 Mir8103-201ENSMUST00000183945 107 ntBASIC2.27□□□□□ -2.05
Col9a1Q05722 Gm25759-201ENSMUST00000103988 129 ntBASIC2.26□□□□□ -2.05
Col9a1Q05722 Gm22416-201ENSMUST00000158590 88 ntBASIC2.26□□□□□ -2.05
Col9a1Q05722 Gm25119-201ENSMUST00000158815 88 ntBASIC2.26□□□□□ -2.05
Col9a1Q05722 Gm3852-201ENSMUST00000182781 264 ntBASIC2.26□□□□□ -2.05
Col9a1Q05722 Mir7052-201ENSMUST00000184821 65 ntBASIC2.26□□□□□ -2.05
Col9a1Q05722 Mir7021-201ENSMUST00000197026 63 ntBASIC2.26□□□□□ -2.05
Col9a1Q05722 Gm25402-201ENSMUST00000082966 131 ntBASIC2.26□□□□□ -2.05
Col9a1Q05722 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col9a1Q05722 Gm13231-201ENSMUST00000119218 2850 ntBASIC2.26□□□□□ -2.05
Col9a1Q05722 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col9a1Q05722 Gm22541-201ENSMUST00000158165 127 ntBASIC2.25□□□□□ -2.05
Col9a1Q05722 Mir7675-201ENSMUST00000184262 58 ntBASIC2.25□□□□□ -2.05
Col9a1Q05722 Gm23301-201ENSMUST00000082713 65 ntBASIC2.25□□□□□ -2.05
Col9a1Q05722 Mir487b-201ENSMUST00000102265 82 ntBASIC2.24□□□□□ -2.05
Col9a1Q05722 Gm23991-201ENSMUST00000117033 93 ntBASIC2.24□□□□□ -2.05
Col9a1Q05722 Gm23600-201ENSMUST00000157260 71 ntBASIC2.24□□□□□ -2.05
Col9a1Q05722 Snord2-201ENSMUST00000157899 69 ntBASIC2.24□□□□□ -2.05
Col9a1Q05722 Gm27977-201ENSMUST00000185159 111 ntBASIC2.24□□□□□ -2.05
Col9a1Q05722 Gm43944-201ENSMUST00000205220 120 ntBASIC2.24□□□□□ -2.05
Col9a1Q05722 Gm24580-201ENSMUST00000103965 131 ntBASIC2.23□□□□□ -2.05
Col9a1Q05722 Gm25945-201ENSMUST00000122484 135 ntBASIC2.23□□□□□ -2.05
Col9a1Q05722 Mir1961-201ENSMUST00000158643 112 ntBASIC2.23□□□□□ -2.05
Col9a1Q05722 Gm28383-201ENSMUST00000187563 139 ntBASIC2.23□□□□□ -2.05
Col9a1Q05722 Traj53-201ENSMUST00000103690 66 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Col9a1Q05722 Gm23336-201ENSMUST00000117023 123 ntBASIC2.22□□□□□ -2.05
Col9a1Q05722 Gm26038-201ENSMUST00000158151 106 ntBASIC2.22□□□□□ -2.05
Col9a1Q05722 Gm23114-201ENSMUST00000158478 117 ntBASIC2.22□□□□□ -2.05
Col9a1Q05722 Gm24229-201ENSMUST00000158830 118 ntBASIC2.22□□□□□ -2.05
Col9a1Q05722 Mir6901-201ENSMUST00000185062 62 ntBASIC2.22□□□□□ -2.05
Col9a1Q05722 Gm18433-201ENSMUST00000192747 197 ntBASIC2.22□□□□□ -2.05
Col9a1Q05722 AC238676.2-201ENSMUST00000220910 94 ntBASIC2.22□□□□□ -2.05
Col9a1Q05722 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Col9a1Q05722 Gm24237-201ENSMUST00000157790 132 ntBASIC2.21□□□□□ -2.06
Col9a1Q05722 Gm25658-201ENSMUST00000158472 128 ntBASIC2.21□□□□□ -2.06
Col9a1Q05722 Gm24736-201ENSMUST00000158862 130 ntBASIC2.21□□□□□ -2.06
Col9a1Q05722 Gm24044-201ENSMUST00000083107 156 ntBASIC2.21□□□□□ -2.06
Col9a1Q05722 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.21□□□□□ -2.06
Col9a1Q05722 Gm23961-201ENSMUST00000104685 97 ntBASIC2.2□□□□□ -2.06
Col9a1Q05722 Gm25663-201ENSMUST00000157698 135 ntBASIC2.2□□□□□ -2.06
Col9a1Q05722 Gm22565-201ENSMUST00000175540 69 ntBASIC2.2□□□□□ -2.06
Col9a1Q05722 Gm22474-201ENSMUST00000179407 107 ntBASIC2.2□□□□□ -2.06
Col9a1Q05722 Mir7059-201ENSMUST00000184825 59 ntBASIC2.2□□□□□ -2.06
Col9a1Q05722 Gm29432-201ENSMUST00000185397 139 ntBASIC2.2□□□□□ -2.06
Col9a1Q05722 Mir324-201ENSMUST00000083600 89 ntBASIC2.2□□□□□ -2.06
Col9a1Q05722 Mir223-201ENSMUST00000102112 110 ntBASIC2.19□□□□□ -2.06
Col9a1Q05722 Gm25460-201ENSMUST00000157954 127 ntBASIC2.19□□□□□ -2.06
Col9a1Q05722 Gm24073-201ENSMUST00000158177 106 ntBASIC2.19□□□□□ -2.06
Col9a1Q05722 Gm25328-201ENSMUST00000175013 107 ntBASIC2.19□□□□□ -2.06
Col9a1Q05722 Gm25035-201ENSMUST00000175414 77 ntBASIC2.19□□□□□ -2.06
Col9a1Q05722 Mir6962-201ENSMUST00000199512 63 ntBASIC2.19□□□□□ -2.06
Col9a1Q05722 CT025630.1-201ENSMUST00000227901 172 ntBASIC2.19□□□□□ -2.06
Col9a1Q05722 Gm23730-201ENSMUST00000083236 107 ntBASIC2.19□□□□□ -2.06
Col9a1Q05722 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC2.18□□□□□ -2.06
Col9a1Q05722 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col9a1Q05722 Mir3108-201ENSMUST00000175500 79 ntBASIC2.18□□□□□ -2.06
Col9a1Q05722 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col9a1Q05722 Mir7079-201ENSMUST00000184697 69 ntBASIC2.18□□□□□ -2.06
Col9a1Q05722 Gm24624-201ENSMUST00000082617 164 ntBASIC2.18□□□□□ -2.06
Col9a1Q05722 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col9a1Q05722 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Col9a1Q05722 Mir1933-201ENSMUST00000158930 88 ntBASIC2.17□□□□□ -2.06
Col9a1Q05722 Gm27937-201ENSMUST00000183605 88 ntBASIC2.17□□□□□ -2.06
Col9a1Q05722 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
Col9a1Q05722 Mir669a-3-201ENSMUST00000102074 109 ntBASIC2.16□□□□□ -2.06
Col9a1Q05722 Gm24098-201ENSMUST00000102075 109 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 227.5 ms