Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm29535-201ENSMUST00000185723 109 ntBASIC1.4□□□□□ -2.19
Rfx1P48377 Gm28143-201ENSMUST00000191082 109 ntBASIC1.4□□□□□ -2.19
Rfx1P48377 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Rfx1P48377 Gm25170-201ENSMUST00000104191 129 ntBASIC1.39□□□□□ -2.19
Rfx1P48377 Gm22788-201ENSMUST00000157876 61 ntBASIC1.39□□□□□ -2.19
Rfx1P48377 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.39□□□□□ -2.19
Rfx1P48377 Mir6962-201ENSMUST00000199512 63 ntBASIC1.39□□□□□ -2.19
Rfx1P48377 Gm24624-201ENSMUST00000082617 164 ntBASIC1.39□□□□□ -2.19
Rfx1P48377 Gm25056-201ENSMUST00000157372 62 ntBASIC1.38□□□□□ -2.19
Rfx1P48377 Gm26363-201ENSMUST00000158866 83 ntBASIC1.38□□□□□ -2.19
Rfx1P48377 Mir7059-201ENSMUST00000184825 59 ntBASIC1.38□□□□□ -2.19
Rfx1P48377 Gm44211-201ENSMUST00000204867 145 ntBASIC1.38□□□□□ -2.19
Rfx1P48377 Gm22980-201ENSMUST00000082608 70 ntBASIC1.38□□□□□ -2.19
Rfx1P48377 Gm26301-201ENSMUST00000104813 95 ntBASIC1.37□□□□□ -2.19
Rfx1P48377 Gm23991-201ENSMUST00000117033 93 ntBASIC1.37□□□□□ -2.19
Rfx1P48377 Gm24500-201ENSMUST00000158447 124 ntBASIC1.37□□□□□ -2.19
Rfx1P48377 Mir6240-201ENSMUST00000184281 117 ntBASIC1.37□□□□□ -2.19
Rfx1P48377 Gm43927-201ENSMUST00000204599 117 ntBASIC1.37□□□□□ -2.19
Rfx1P48377 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.37□□□□□ -2.19
Rfx1P48377 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Rfx1P48377 Mir343-201ENSMUST00000102360 75 ntBASIC1.36□□□□□ -2.19
Rfx1P48377 Gm22729-201ENSMUST00000158088 129 ntBASIC1.36□□□□□ -2.19
Rfx1P48377 Gm24154-201ENSMUST00000175261 130 ntBASIC1.36□□□□□ -2.19
Rfx1P48377 Gm27974-201ENSMUST00000183415 105 ntBASIC1.36□□□□□ -2.19
Rfx1P48377 Mir376b-201ENSMUST00000195930 82 ntBASIC1.36□□□□□ -2.19
Rfx1P48377 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.35□□□□□ -2.19
Rfx1P48377 Gm45265-201ENSMUST00000210852 2497 ntBASIC1.35□□□□□ -2.19
Rfx1P48377 Gm25040-201ENSMUST00000103877 66 ntBASIC1.35□□□□□ -2.19
Rfx1P48377 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Rfx1P48377 Gm22140-201ENSMUST00000158745 120 ntBASIC1.35□□□□□ -2.19
Rfx1P48377 Gm23416-201ENSMUST00000175520 95 ntBASIC1.35□□□□□ -2.19
Rfx1P48377 Mir509-201ENSMUST00000196089 75 ntBASIC1.35□□□□□ -2.19
Rfx1P48377 Mir1949-202ENSMUST00000199259 70 ntBASIC1.35□□□□□ -2.19
Rfx1P48377 Gm25138-201ENSMUST00000083248 136 ntBASIC1.35□□□□□ -2.19
Rfx1P48377 Gm25416-201ENSMUST00000104221 107 ntBASIC1.34□□□□□ -2.19
Rfx1P48377 n-R5s6-201ENSMUST00000122663 88 ntBASIC1.34□□□□□ -2.19
Rfx1P48377 Mir6342-201ENSMUST00000183870 125 ntBASIC1.34□□□□□ -2.19
Rfx1P48377 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.34□□□□□ -2.2
Rfx1P48377 Gm23652-201ENSMUST00000116752 107 ntBASIC1.33□□□□□ -2.2
Rfx1P48377 Gm26104-201ENSMUST00000157250 108 ntBASIC1.33□□□□□ -2.2
Rfx1P48377 Mir7010-201ENSMUST00000183464 63 ntBASIC1.33□□□□□ -2.2
Rfx1P48377 Snord32a-201ENSMUST00000083285 83 ntBASIC1.33□□□□□ -2.2
Rfx1P48377 Mir29a-201ENSMUST00000083676 88 ntBASIC1.33□□□□□ -2.2
Rfx1P48377 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
Rfx1P48377 Gm23410-201ENSMUST00000179967 107 ntBASIC1.32□□□□□ -2.2
Rfx1P48377 Gm22505-201ENSMUST00000082956 108 ntBASIC1.32□□□□□ -2.2
Rfx1P48377 Gm22363-201ENSMUST00000083100 108 ntBASIC1.32□□□□□ -2.2
Rfx1P48377 Gm23814-201ENSMUST00000083230 102 ntBASIC1.32□□□□□ -2.2
Rfx1P48377 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.32□□□□□ -2.2
Rfx1P48377 Mir448-201ENSMUST00000083516 112 ntBASIC1.32□□□□□ -2.2
Rfx1P48377 Mir1904-201ENSMUST00000122702 80 ntBASIC1.31□□□□□ -2.2
Rfx1P48377 Mir6394-201ENSMUST00000184738 99 ntBASIC1.31□□□□□ -2.2
Rfx1P48377 Gm20108-201ENSMUST00000219977 153 ntBASIC1.31□□□□□ -2.2
Rfx1P48377 Gm25496-201ENSMUST00000104430 120 ntBASIC1.3□□□□□ -2.2
Rfx1P48377 Gm26712-201ENSMUST00000180813 217 ntBASIC1.3□□□□□ -2.2
Rfx1P48377 Gm27686-201ENSMUST00000185123 91 ntBASIC1.3□□□□□ -2.2
Rfx1P48377 Gm22454-201ENSMUST00000082583 107 ntBASIC1.3□□□□□ -2.2
Rfx1P48377 Snora75-201ENSMUST00000082903 133 ntBASIC1.3□□□□□ -2.2
Rfx1P48377 Gm22354-201ENSMUST00000083919 70 ntBASIC1.3□□□□□ -2.2
Rfx1P48377 Gm13065-201ENSMUST00000119178 141 ntBASIC1.29□□□□□ -2.2
Rfx1P48377 Gm23329-201ENSMUST00000157415 108 ntBASIC1.29□□□□□ -2.2
Rfx1P48377 Gm23291-201ENSMUST00000175611 78 ntBASIC1.29□□□□□ -2.2
Rfx1P48377 Gm43907-201ENSMUST00000203128 117 ntBASIC1.29□□□□□ -2.2
Rfx1P48377 DQ267101-201ENSMUST00000082562 73 ntBASIC1.29□□□□□ -2.2
Rfx1P48377 Mir196b-201ENSMUST00000083509 85 ntBASIC1.29□□□□□ -2.2
Rfx1P48377 Gm24697-201ENSMUST00000083881 107 ntBASIC1.29□□□□□ -2.2
Rfx1P48377 Snord35a-201ENSMUST00000083884 90 ntBASIC1.29□□□□□ -2.2
Rfx1P48377 Gm22677-201ENSMUST00000116977 108 ntBASIC1.28□□□□□ -2.2
Rfx1P48377 Gm26478-201ENSMUST00000122611 133 ntBASIC1.28□□□□□ -2.2
Rfx1P48377 Gm23340-201ENSMUST00000158955 123 ntBASIC1.28□□□□□ -2.2
Rfx1P48377 Gm23636-201ENSMUST00000175070 95 ntBASIC1.28□□□□□ -2.2
Rfx1P48377 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.28□□□□□ -2.2
Rfx1P48377 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Rfx1P48377 Mir6381-201ENSMUST00000183426 87 ntBASIC1.28□□□□□ -2.2
Rfx1P48377 Gm42506-201ENSMUST00000202009 150 ntBASIC1.28□□□□□ -2.2
Rfx1P48377 Gm22652-201ENSMUST00000083207 131 ntBASIC1.28□□□□□ -2.2
Rfx1P48377 Gm23328-201ENSMUST00000157418 132 ntBASIC1.27□□□□□ -2.21
Rfx1P48377 Gm27656-201ENSMUST00000185055 80 ntBASIC1.27□□□□□ -2.21
Rfx1P48377 Gm24342-201ENSMUST00000103907 104 ntBASIC1.26□□□□□ -2.21
Rfx1P48377 Gm6985-201ENSMUST00000121255 271 ntBASIC1.26□□□□□ -2.21
Rfx1P48377 Gm25300-201ENSMUST00000175284 84 ntBASIC1.26□□□□□ -2.21
Rfx1P48377 Gm27717-201ENSMUST00000183933 151 ntBASIC1.26□□□□□ -2.21
Rfx1P48377 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.26□□□□□ -2.21
Rfx1P48377 Mir695-201ENSMUST00000102261 109 ntBASIC1.25□□□□□ -2.21
Rfx1P48377 Gm22520-201ENSMUST00000158269 129 ntBASIC1.25□□□□□ -2.21
Rfx1P48377 Gm24678-201ENSMUST00000158756 104 ntBASIC1.25□□□□□ -2.21
Rfx1P48377 Snord50a-201ENSMUST00000178154 72 ntBASIC1.25□□□□□ -2.21
Rfx1P48377 Gm24463-201ENSMUST00000178417 72 ntBASIC1.25□□□□□ -2.21
Rfx1P48377 Mir6985-201ENSMUST00000184641 61 ntBASIC1.25□□□□□ -2.21
Rfx1P48377 Gm22780-201ENSMUST00000104084 132 ntBASIC1.24□□□□□ -2.21
Rfx1P48377 Mir1954-201ENSMUST00000175595 86 ntBASIC1.24□□□□□ -2.21
Rfx1P48377 Gm25229-201ENSMUST00000178587 79 ntBASIC1.24□□□□□ -2.21
Rfx1P48377 Gm27639-201ENSMUST00000184937 85 ntBASIC1.24□□□□□ -2.21
Rfx1P48377 Gm24202-201ENSMUST00000082948 103 ntBASIC1.24□□□□□ -2.21
Rfx1P48377 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.24□□□□□ -2.21
Rfx1P48377 Gm24431-201ENSMUST00000104073 66 ntBASIC1.23□□□□□ -2.21
Rfx1P48377 Gm24233-201ENSMUST00000104317 122 ntBASIC1.23□□□□□ -2.21
Rfx1P48377 Gm26441-201ENSMUST00000082590 104 ntBASIC1.23□□□□□ -2.21
Rfx1P48377 Mir22-201ENSMUST00000083595 95 ntBASIC1.23□□□□□ -2.21
Rfx1P48377 Gm23347-201ENSMUST00000083823 82 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 175.1 ms