Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm22638-201ENSMUST00000179674 107 ntBASIC-0.05□□□□□ -2.42
Traf1P39428 Gm43907-201ENSMUST00000203128 117 ntBASIC-0.05□□□□□ -2.42
Traf1P39428 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
Traf1P39428 Gm23239-201ENSMUST00000083006 181 ntBASIC-0.05□□□□□ -2.42
Traf1P39428 Gm23507-201ENSMUST00000083078 107 ntBASIC-0.05□□□□□ -2.42
Traf1P39428 Snord85-201ENSMUST00000083262 73 ntBASIC-0.05□□□□□ -2.42
Traf1P39428 Gm44322-201ENSMUST00000196830 115 ntBASIC-0.06□□□□□ -2.42
Traf1P39428 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.06□□□□□ -2.42
Traf1P39428 Snord80-201ENSMUST00000083801 81 ntBASIC-0.06□□□□□ -2.42
Traf1P39428 Snord78-201ENSMUST00000104032 66 ntBASIC-0.07□□□□□ -2.42
Traf1P39428 Gm22196-201ENSMUST00000116865 109 ntBASIC-0.07□□□□□ -2.42
Traf1P39428 Gm23900-201ENSMUST00000157569 108 ntBASIC-0.07□□□□□ -2.42
Traf1P39428 Gm25370-201ENSMUST00000158159 94 ntBASIC-0.07□□□□□ -2.42
Traf1P39428 Gm22203-201ENSMUST00000158605 58 ntBASIC-0.07□□□□□ -2.42
Traf1P39428 Gm25071-201ENSMUST00000175232 70 ntBASIC-0.07□□□□□ -2.42
Traf1P39428 Mir3473d-201ENSMUST00000175346 81 ntBASIC-0.07□□□□□ -2.42
Traf1P39428 Mir466b-3-201ENSMUST00000103806 81 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Gm23749-201ENSMUST00000104223 131 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Snord2-201ENSMUST00000157899 69 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Gm25014-201ENSMUST00000158401 103 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Gm23384-201ENSMUST00000158593 103 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Gm24884-201ENSMUST00000158784 119 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Gm25328-201ENSMUST00000175013 107 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Gm43324-201ENSMUST00000197482 289 ntBASIC-0.08□□□□□ -2.42
Traf1P39428 Gm24683-201ENSMUST00000104840 88 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Gm24648-201ENSMUST00000157111 132 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Gm23986-201ENSMUST00000157144 63 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Gm25366-201ENSMUST00000158845 124 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Gm26498-201ENSMUST00000177799 79 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Gm23922-201ENSMUST00000178792 79 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Gm24657-201ENSMUST00000180085 79 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Gm26230-201ENSMUST00000180141 79 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Gm22996-201ENSMUST00000180236 79 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.09□□□□□ -2.42
Traf1P39428 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
Traf1P39428 Snord64-201ENSMUST00000104003 67 ntBASIC-0.1□□□□□ -2.43
Traf1P39428 Mup-ps5-201ENSMUST00000118667 99 ntBASIC-0.1□□□□□ -2.43
Traf1P39428 Gm26133-201ENSMUST00000157363 100 ntBASIC-0.1□□□□□ -2.43
Traf1P39428 Gm22336-201ENSMUST00000157719 107 ntBASIC-0.1□□□□□ -2.43
Traf1P39428 Gm22503-201ENSMUST00000158983 115 ntBASIC-0.1□□□□□ -2.43
Traf1P39428 Gm23291-201ENSMUST00000175611 78 ntBASIC-0.1□□□□□ -2.43
Traf1P39428 Gm26337-201ENSMUST00000178000 79 ntBASIC-0.1□□□□□ -2.43
Traf1P39428 Gm24256-201ENSMUST00000083696 84 ntBASIC-0.1□□□□□ -2.43
Traf1P39428 Gm24793-201ENSMUST00000104289 132 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 Gm22031-201ENSMUST00000116945 126 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 Gm27851-201ENSMUST00000183529 63 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 Mir327-201ENSMUST00000199328 69 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 AL929417.1-201ENSMUST00000214901 124 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 Gm26438-201ENSMUST00000082593 107 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 Mir141-201ENSMUST00000083540 72 ntBASIC-0.11□□□□□ -2.43
Traf1P39428 Gm23988-201ENSMUST00000117034 122 ntBASIC-0.12□□□□□ -2.43
Traf1P39428 Gm12086-201ENSMUST00000120863 228 ntBASIC-0.12□□□□□ -2.43
Traf1P39428 Gm22319-201ENSMUST00000157147 122 ntBASIC-0.12□□□□□ -2.43
Traf1P39428 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.12□□□□□ -2.43
Traf1P39428 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.12□□□□□ -2.43
Traf1P39428 Gm27699-201ENSMUST00000183553 180 ntBASIC-0.12□□□□□ -2.43
Traf1P39428 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
Traf1P39428 Gm25618-201ENSMUST00000179484 107 ntBASIC-0.13□□□□□ -2.43
Traf1P39428 Gm38298-201ENSMUST00000193578 118 ntBASIC-0.13□□□□□ -2.43
Traf1P39428 Mir191-201ENSMUST00000196210 74 ntBASIC-0.13□□□□□ -2.43
Traf1P39428 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.13□□□□□ -2.43
Traf1P39428 Gm22509-201ENSMUST00000082775 107 ntBASIC-0.13□□□□□ -2.43
Traf1P39428 Gm26207-201ENSMUST00000082909 104 ntBASIC-0.13□□□□□ -2.43
Traf1P39428 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.13□□□□□ -2.43
Traf1P39428 Gm23344-201ENSMUST00000083818 68 ntBASIC-0.13□□□□□ -2.43
Traf1P39428 Gm22911-201ENSMUST00000177920 107 ntBASIC-0.14□□□□□ -2.43
Traf1P39428 Gm37750-201ENSMUST00000193563 129 ntBASIC-0.14□□□□□ -2.43
Traf1P39428 Gm23442-201ENSMUST00000082919 134 ntBASIC-0.14□□□□□ -2.43
Traf1P39428 Gm26210-201ENSMUST00000158680 91 ntBASIC-0.15□□□□□ -2.43
Traf1P39428 Gm26291-201ENSMUST00000158889 137 ntBASIC-0.15□□□□□ -2.43
Traf1P39428 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.15□□□□□ -2.43
Traf1P39428 Mir344-2-201ENSMUST00000175446 80 ntBASIC-0.15□□□□□ -2.43
Traf1P39428 Gm29432-201ENSMUST00000185397 139 ntBASIC-0.15□□□□□ -2.43
Traf1P39428 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.15□□□□□ -2.43
Traf1P39428 Gm44859-201ENSMUST00000207831 94 ntBASIC-0.15□□□□□ -2.43
Traf1P39428 Gm26062-201ENSMUST00000083379 107 ntBASIC-0.15□□□□□ -2.43
Traf1P39428 Mir29a-201ENSMUST00000083676 88 ntBASIC-0.15□□□□□ -2.43
Traf1P39428 AC154506.4-201ENSMUST00000224898 3416 ntBASIC-0.16□□□□□ -2.43
Traf1P39428 Gm25756-201ENSMUST00000103990 136 ntBASIC-0.16□□□□□ -2.44
Traf1P39428 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.16□□□□□ -2.44
Traf1P39428 Gm22558-201ENSMUST00000157326 95 ntBASIC-0.16□□□□□ -2.44
Traf1P39428 Gm25887-201ENSMUST00000157777 84 ntBASIC-0.16□□□□□ -2.44
Traf1P39428 Gm22087-201ENSMUST00000158339 88 ntBASIC-0.16□□□□□ -2.44
Traf1P39428 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.16□□□□□ -2.44
Traf1P39428 Mir509-201ENSMUST00000196089 75 ntBASIC-0.16□□□□□ -2.44
Traf1P39428 Igkv13-78-1-201ENSMUST00000199298 200 ntBASIC-0.16□□□□□ -2.44
Traf1P39428 Gm22813-201ENSMUST00000199948 123 ntBASIC-0.16□□□□□ -2.44
Traf1P39428 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.17□□□□□ -2.44
Traf1P39428 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.17□□□□□ -2.44
Traf1P39428 Gm23651-201ENSMUST00000116755 120 ntBASIC-0.17□□□□□ -2.44
Traf1P39428 Gm24947-201ENSMUST00000158334 110 ntBASIC-0.17□□□□□ -2.44
Traf1P39428 Gm22942-201ENSMUST00000158563 124 ntBASIC-0.17□□□□□ -2.44
Traf1P39428 Mir6481-201ENSMUST00000184617 110 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 197.1 ms