Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm26158-201ENSMUST00000158973 119 ntBASIC0.71□□□□□ -2.3
RxraP28700 Gm23917-201ENSMUST00000175256 98 ntBASIC0.71□□□□□ -2.3
RxraP28700 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.71□□□□□ -2.3
RxraP28700 Mir216a-201ENSMUST00000083605 72 ntBASIC0.71□□□□□ -2.3
RxraP28700 Gm25629-201ENSMUST00000084001 107 ntBASIC0.71□□□□□ -2.3
RxraP28700 Gm24579-201ENSMUST00000103964 144 ntBASIC0.7□□□□□ -2.3
RxraP28700 Gm11694-201ENSMUST00000118637 159 ntBASIC0.7□□□□□ -2.3
RxraP28700 Gm44602-201ENSMUST00000205948 132 ntBASIC0.7□□□□□ -2.3
RxraP28700 Gm23301-201ENSMUST00000082713 65 ntBASIC0.7□□□□□ -2.3
RxraP28700 Gm25600-201ENSMUST00000158357 106 ntBASIC0.69□□□□□ -2.3
RxraP28700 Gm24129-201ENSMUST00000158537 97 ntBASIC0.69□□□□□ -2.3
RxraP28700 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.69□□□□□ -2.3
RxraP28700 Gm27289-201ENSMUST00000183341 82 ntBASIC0.69□□□□□ -2.3
RxraP28700 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC0.69□□□□□ -2.3
RxraP28700 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.69□□□□□ -2.3
RxraP28700 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.69□□□□□ -2.3
RxraP28700 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
RxraP28700 Gm14884-201ENSMUST00000120456 196 ntBASIC0.68□□□□□ -2.3
RxraP28700 Mir3109-201ENSMUST00000175301 88 ntBASIC0.68□□□□□ -2.3
RxraP28700 Gm25693-201ENSMUST00000175443 85 ntBASIC0.68□□□□□ -2.3
RxraP28700 Mir7010-201ENSMUST00000183464 63 ntBASIC0.68□□□□□ -2.3
RxraP28700 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.68□□□□□ -2.3
RxraP28700 Gm23344-201ENSMUST00000083818 68 ntBASIC0.68□□□□□ -2.3
RxraP28700 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.68□□□□□ -2.3
RxraP28700 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
RxraP28700 Gm24290-201ENSMUST00000157634 96 ntBASIC0.67□□□□□ -2.3
RxraP28700 Gm25974-201ENSMUST00000158701 94 ntBASIC0.67□□□□□ -2.3
RxraP28700 Gm23197-201ENSMUST00000158809 112 ntBASIC0.67□□□□□ -2.3
RxraP28700 BC050972-201ENSMUST00000168475 526 ntTSL 3 BASIC0.67□□□□□ -2.3
RxraP28700 Gm25618-201ENSMUST00000179484 107 ntBASIC0.67□□□□□ -2.3
RxraP28700 Mir6389-201ENSMUST00000183661 102 ntBASIC0.67□□□□□ -2.3
RxraP28700 Gm26062-201ENSMUST00000083379 107 ntBASIC0.67□□□□□ -2.3
RxraP28700 Gm23482-201ENSMUST00000104172 122 ntBASIC0.66□□□□□ -2.3
RxraP28700 Gm22030-201ENSMUST00000116942 63 ntBASIC0.66□□□□□ -2.3
RxraP28700 Gm23661-201ENSMUST00000122630 87 ntBASIC0.66□□□□□ -2.3
RxraP28700 Gm22706-201ENSMUST00000157907 112 ntBASIC0.66□□□□□ -2.3
RxraP28700 Mir100-201ENSMUST00000175270 80 ntBASIC0.66□□□□□ -2.3
RxraP28700 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.66□□□□□ -2.3
RxraP28700 Gm26202-201ENSMUST00000082910 65 ntBASIC0.66□□□□□ -2.3
RxraP28700 Snora2b-201ENSMUST00000084005 137 ntBASIC0.66□□□□□ -2.3
RxraP28700 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.65□□□□□ -2.31
RxraP28700 Gm23900-201ENSMUST00000157569 108 ntBASIC0.65□□□□□ -2.31
RxraP28700 Gm24399-201ENSMUST00000157869 74 ntBASIC0.65□□□□□ -2.31
RxraP28700 Gm25014-201ENSMUST00000158401 103 ntBASIC0.65□□□□□ -2.31
RxraP28700 Gm23008-201ENSMUST00000158946 80 ntBASIC0.65□□□□□ -2.31
RxraP28700 Gm25300-201ENSMUST00000175284 84 ntBASIC0.65□□□□□ -2.31
RxraP28700 Gm24323-201ENSMUST00000175342 77 ntBASIC0.65□□□□□ -2.31
RxraP28700 Gm45197-201ENSMUST00000205288 151 ntBASIC0.65□□□□□ -2.31
RxraP28700 Mir377-201ENSMUST00000083504 68 ntBASIC0.65□□□□□ -2.31
RxraP28700 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
RxraP28700 Gm23126-201ENSMUST00000104260 134 ntBASIC0.64□□□□□ -2.31
RxraP28700 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RxraP28700 Gm26133-201ENSMUST00000157363 100 ntBASIC0.64□□□□□ -2.31
RxraP28700 Gm24009-201ENSMUST00000157734 93 ntBASIC0.64□□□□□ -2.31
RxraP28700 Gm22541-201ENSMUST00000158165 127 ntBASIC0.64□□□□□ -2.31
RxraP28700 AC160962.3-201ENSMUST00000225914 112 ntBASIC0.64□□□□□ -2.31
RxraP28700 Gm25635-201ENSMUST00000082675 131 ntBASIC0.64□□□□□ -2.31
RxraP28700 Gm26109-201ENSMUST00000083970 70 ntBASIC0.64□□□□□ -2.31
RxraP28700 Gm25416-201ENSMUST00000104221 107 ntBASIC0.63□□□□□ -2.31
RxraP28700 Gm25056-201ENSMUST00000157372 62 ntBASIC0.63□□□□□ -2.31
RxraP28700 AC140930.2-201ENSMUST00000221803 109 ntBASIC0.63□□□□□ -2.31
RxraP28700 Gm25337-201ENSMUST00000083723 104 ntBASIC0.63□□□□□ -2.31
RxraP28700 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.62□□□□□ -2.31
RxraP28700 Gm27297-201ENSMUST00000183395 105 ntBASIC0.62□□□□□ -2.31
RxraP28700 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC0.61□□□□□ -2.31
RxraP28700 Gm24555-201ENSMUST00000104548 124 ntBASIC0.61□□□□□ -2.31
RxraP28700 Gm26253-201ENSMUST00000122493 103 ntBASIC0.61□□□□□ -2.31
RxraP28700 Gm24963-201ENSMUST00000157916 144 ntBASIC0.61□□□□□ -2.31
RxraP28700 Gm23783-201ENSMUST00000157941 102 ntBASIC0.61□□□□□ -2.31
RxraP28700 Gm22212-201ENSMUST00000158096 106 ntBASIC0.61□□□□□ -2.31
RxraP28700 Gm22522-201ENSMUST00000158271 151 ntBASIC0.61□□□□□ -2.31
RxraP28700 Mir6342-201ENSMUST00000183870 125 ntBASIC0.61□□□□□ -2.31
RxraP28700 AC166341.8-201ENSMUST00000221267 108 ntBASIC0.61□□□□□ -2.31
RxraP28700 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.61□□□□□ -2.31
RxraP28700 n-R5s96-201ENSMUST00000082574 124 ntBASIC0.61□□□□□ -2.31
RxraP28700 Gm16265-201ENSMUST00000134558 108 ntBASIC0.6□□□□□ -2.31
RxraP28700 Gm25393-201ENSMUST00000157336 285 ntBASIC0.6□□□□□ -2.31
RxraP28700 Gm24288-201ENSMUST00000157630 144 ntBASIC0.6□□□□□ -2.31
RxraP28700 Gm26484-201ENSMUST00000158018 106 ntBASIC0.6□□□□□ -2.31
RxraP28700 Gm25161-201ENSMUST00000158913 132 ntBASIC0.6□□□□□ -2.31
RxraP28700 Mir6237-201ENSMUST00000183808 91 ntBASIC0.6□□□□□ -2.31
RxraP28700 AC132833.2-201ENSMUST00000228699 157 ntBASIC0.6□□□□□ -2.31
RxraP28700 Gm23244-201ENSMUST00000083375 92 ntBASIC0.6□□□□□ -2.31
RxraP28700 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.59□□□□□ -2.31
RxraP28700 Mir450b-201ENSMUST00000102095 82 ntBASIC0.59□□□□□ -2.31
RxraP28700 Mir216b-201ENSMUST00000102363 86 ntBASIC0.59□□□□□ -2.31
RxraP28700 Gm23321-201ENSMUST00000104465 126 ntBASIC0.59□□□□□ -2.31
RxraP28700 Gm29535-201ENSMUST00000185723 109 ntBASIC0.59□□□□□ -2.31
RxraP28700 Gm28143-201ENSMUST00000191082 109 ntBASIC0.59□□□□□ -2.31
RxraP28700 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.59□□□□□ -2.31
RxraP28700 Gm24099-201ENSMUST00000083384 107 ntBASIC0.59□□□□□ -2.31
RxraP28700 Gm25040-201ENSMUST00000103877 66 ntBASIC0.58□□□□□ -2.32
RxraP28700 Gm24686-201ENSMUST00000157755 93 ntBASIC0.58□□□□□ -2.32
RxraP28700 Gm22788-201ENSMUST00000157876 61 ntBASIC0.58□□□□□ -2.32
RxraP28700 Gm22520-201ENSMUST00000158269 129 ntBASIC0.58□□□□□ -2.32
RxraP28700 Gm22770-201ENSMUST00000158368 67 ntBASIC0.58□□□□□ -2.32
RxraP28700 Gm38295-201ENSMUST00000191951 151 ntBASIC0.58□□□□□ -2.32
RxraP28700 Snora75-201ENSMUST00000082903 133 ntBASIC0.58□□□□□ -2.32
RxraP28700 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
RxraP28700 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 247.3 ms