Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm23570-201ENSMUST00000083029 104 ntBASIC1.74□□□□□ -2.13
RaraP11416 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.74□□□□□ -2.13
RaraP11416 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RaraP11416 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
RaraP11416 mt-Tl2-201ENSMUST00000082417 71 ntBASIC1.73□□□□□ -2.13
RaraP11416 Gm23376-201ENSMUST00000082938 160 ntBASIC1.73□□□□□ -2.13
RaraP11416 Gm25832-201ENSMUST00000104140 130 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm22082-201ENSMUST00000157587 161 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm26089-201ENSMUST00000157898 107 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm26029-201ENSMUST00000158659 132 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm25693-201ENSMUST00000175443 85 ntBASIC1.72□□□□□ -2.13
RaraP11416 Mir6240-201ENSMUST00000184281 117 ntBASIC1.72□□□□□ -2.13
RaraP11416 Mir6352-201ENSMUST00000184495 116 ntBASIC1.72□□□□□ -2.13
RaraP11416 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.72□□□□□ -2.13
RaraP11416 Gm24208-201ENSMUST00000082783 135 ntBASIC1.72□□□□□ -2.13
RaraP11416 Mir216b-201ENSMUST00000102363 86 ntBASIC1.71□□□□□ -2.14
RaraP11416 Snord71-201ENSMUST00000104361 85 ntBASIC1.71□□□□□ -2.14
RaraP11416 Gm23203-201ENSMUST00000104374 107 ntBASIC1.71□□□□□ -2.14
RaraP11416 Gm15115-201ENSMUST00000121145 264 ntBASIC1.71□□□□□ -2.14
RaraP11416 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RaraP11416 Gm25160-201ENSMUST00000158914 102 ntBASIC1.71□□□□□ -2.14
RaraP11416 Gm23339-201ENSMUST00000158962 139 ntBASIC1.71□□□□□ -2.14
RaraP11416 Gm25870-201ENSMUST00000179845 79 ntBASIC1.71□□□□□ -2.14
RaraP11416 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.71□□□□□ -2.14
RaraP11416 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.7□□□□□ -2.14
RaraP11416 Gm22030-201ENSMUST00000116942 63 ntBASIC1.7□□□□□ -2.14
RaraP11416 Gm24290-201ENSMUST00000157634 96 ntBASIC1.7□□□□□ -2.14
RaraP11416 Gm23114-201ENSMUST00000158478 117 ntBASIC1.7□□□□□ -2.14
RaraP11416 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RaraP11416 Mir1933-201ENSMUST00000158930 88 ntBASIC1.69□□□□□ -2.14
RaraP11416 Gm23340-201ENSMUST00000158955 123 ntBASIC1.69□□□□□ -2.14
RaraP11416 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.69□□□□□ -2.14
RaraP11416 Snord96a-201ENSMUST00000082791 81 ntBASIC1.69□□□□□ -2.14
RaraP11416 Mir324-201ENSMUST00000083600 89 ntBASIC1.69□□□□□ -2.14
RaraP11416 Gm25964-201ENSMUST00000157171 97 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm22095-201ENSMUST00000158984 150 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm23291-201ENSMUST00000175611 78 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm26499-201ENSMUST00000178544 79 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm26096-201ENSMUST00000179084 79 ntBASIC1.68□□□□□ -2.14
RaraP11416 Gm23130-201ENSMUST00000104252 74 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm23708-201ENSMUST00000104367 123 ntBASIC1.67□□□□□ -2.14
RaraP11416 Mir873a-201ENSMUST00000104863 77 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm25622-201ENSMUST00000157217 104 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm22788-201ENSMUST00000157876 61 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm25936-201ENSMUST00000179952 114 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm27894-201ENSMUST00000184177 92 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm18433-201ENSMUST00000192747 197 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm20305-201ENSMUST00000193226 177 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm43944-201ENSMUST00000205220 120 ntBASIC1.67□□□□□ -2.14
RaraP11416 Gm24202-201ENSMUST00000082948 103 ntBASIC1.67□□□□□ -2.14
RaraP11416 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
RaraP11416 Gm22761-201ENSMUST00000102278 96 ntBASIC1.66□□□□□ -2.14
RaraP11416 Gm42506-201ENSMUST00000202009 150 ntBASIC1.66□□□□□ -2.14
RaraP11416 Gm45754-201ENSMUST00000212380 279 ntBASIC1.66□□□□□ -2.14
RaraP11416 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
RaraP11416 Mir1197-201ENSMUST00000117037 120 ntBASIC1.65□□□□□ -2.15
RaraP11416 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.64□□□□□ -2.15
RaraP11416 Gm23826-201ENSMUST00000157394 119 ntBASIC1.64□□□□□ -2.15
RaraP11416 Mir7665-201ENSMUST00000184907 63 ntBASIC1.64□□□□□ -2.15
RaraP11416 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.64□□□□□ -2.15
RaraP11416 Gm25541-201ENSMUST00000116888 126 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm26274-201ENSMUST00000157103 321 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm24262-201ENSMUST00000157431 144 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm27420-201ENSMUST00000183823 79 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm27656-201ENSMUST00000185055 80 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm43907-201ENSMUST00000203128 117 ntBASIC1.63□□□□□ -2.15
RaraP11416 AC158537.2-201ENSMUST00000223575 150 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm6293-201ENSMUST00000050339 195 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm23301-201ENSMUST00000082713 65 ntBASIC1.63□□□□□ -2.15
RaraP11416 Mir320-201ENSMUST00000083594 82 ntBASIC1.63□□□□□ -2.15
RaraP11416 Mir148b-201ENSMUST00000083626 97 ntBASIC1.63□□□□□ -2.15
RaraP11416 Gm25847-201ENSMUST00000116793 96 ntBASIC1.62□□□□□ -2.15
RaraP11416 Gm25366-201ENSMUST00000158845 124 ntBASIC1.62□□□□□ -2.15
RaraP11416 Gm25950-201ENSMUST00000175331 100 ntBASIC1.62□□□□□ -2.15
RaraP11416 Gm27265-201ENSMUST00000183559 77 ntBASIC1.62□□□□□ -2.15
RaraP11416 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.62□□□□□ -2.15
RaraP11416 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
RaraP11416 Gm25609-201ENSMUST00000104019 104 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm25619-201ENSMUST00000122621 104 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm22541-201ENSMUST00000158165 127 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm26359-201ENSMUST00000158873 101 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm22466-201ENSMUST00000175278 69 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm23306-201ENSMUST00000179058 105 ntBASIC1.61□□□□□ -2.15
RaraP11416 Mir7052-201ENSMUST00000184821 65 ntBASIC1.61□□□□□ -2.15
RaraP11416 Gm44962-201ENSMUST00000206460 279 ntBASIC1.61□□□□□ -2.15
RaraP11416 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
RaraP11416 Gm22786-201ENSMUST00000104086 122 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm26301-201ENSMUST00000104813 95 ntBASIC1.6□□□□□ -2.15
RaraP11416 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm23558-201ENSMUST00000157823 80 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm23221-201ENSMUST00000158118 93 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm25354-201ENSMUST00000179110 105 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm44458-201ENSMUST00000196594 143 ntBASIC1.6□□□□□ -2.15
RaraP11416 Gm26224-201ENSMUST00000082506 80 ntBASIC1.6□□□□□ -2.15
RaraP11416 Snora75-201ENSMUST00000082903 133 ntBASIC1.6□□□□□ -2.15
RaraP11416 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
RaraP11416 Mir653-201ENSMUST00000102402 85 ntBASIC1.59□□□□□ -2.15
RaraP11416 Gm25991-201ENSMUST00000102439 99 ntBASIC1.59□□□□□ -2.15
RaraP11416 Snord69-201ENSMUST00000104024 80 ntBASIC1.59□□□□□ -2.15
RaraP11416 Gm24983-201ENSMUST00000104457 69 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms