Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm26104-201ENSMUST00000157250 108 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Scarna3a-201ENSMUST00000158911 140 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir467a-6-201ENSMUST00000177790 83 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir467a-3-201ENSMUST00000178082 83 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir467a-7-201ENSMUST00000178635 83 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir467a-10-201ENSMUST00000179320 83 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir467a-5-201ENSMUST00000179352 83 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Gm25449-201ENSMUST00000179389 79 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir467a-2-201ENSMUST00000179447 83 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir467a-9-201ENSMUST00000179752 83 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir467a-4-201ENSMUST00000179923 83 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir467a-8-201ENSMUST00000180070 83 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Gm22980-201ENSMUST00000082608 70 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir196b-201ENSMUST00000083509 85 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Mir211-201ENSMUST00000083651 106 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Gm22354-201ENSMUST00000083919 70 ntBASIC1.29□□□□□ -2.2
Vti1aO89116 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
Vti1aO89116 Mir1954-201ENSMUST00000175595 86 ntBASIC1.28□□□□□ -2.2
Vti1aO89116 Mir377-201ENSMUST00000083504 68 ntBASIC1.28□□□□□ -2.2
Vti1aO89116 Mir216b-201ENSMUST00000102363 86 ntBASIC1.27□□□□□ -2.21
Vti1aO89116 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.27□□□□□ -2.21
Vti1aO89116 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Vti1aO89116 Mir100-201ENSMUST00000175270 80 ntBASIC1.26□□□□□ -2.21
Vti1aO89116 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.26□□□□□ -2.21
Vti1aO89116 Gm24527-201ENSMUST00000082920 107 ntBASIC1.26□□□□□ -2.21
Vti1aO89116 Gm24648-201ENSMUST00000157111 132 ntBASIC1.25□□□□□ -2.21
Vti1aO89116 Gm26712-201ENSMUST00000180813 217 ntBASIC1.25□□□□□ -2.21
Vti1aO89116 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.25□□□□□ -2.21
Vti1aO89116 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.24□□□□□ -2.21
Vti1aO89116 Gm22541-201ENSMUST00000158165 127 ntBASIC1.24□□□□□ -2.21
Vti1aO89116 Gm24942-201ENSMUST00000158328 114 ntBASIC1.24□□□□□ -2.21
Vti1aO89116 Gm23853-201ENSMUST00000158375 104 ntBASIC1.24□□□□□ -2.21
Vti1aO89116 Mir15a-201ENSMUST00000175266 84 ntBASIC1.24□□□□□ -2.21
Vti1aO89116 Mir6394-201ENSMUST00000184738 99 ntBASIC1.24□□□□□ -2.21
Vti1aO89116 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Vti1aO89116 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Vti1aO89116 Gm22485-201ENSMUST00000157990 109 ntBASIC1.23□□□□□ -2.21
Vti1aO89116 Gm22140-201ENSMUST00000158745 120 ntBASIC1.23□□□□□ -2.21
Vti1aO89116 Mir6342-201ENSMUST00000183870 125 ntBASIC1.23□□□□□ -2.21
Vti1aO89116 CT571266.1-201ENSMUST00000222859 153 ntBASIC1.23□□□□□ -2.21
Vti1aO89116 Gm22454-201ENSMUST00000082583 107 ntBASIC1.23□□□□□ -2.21
Vti1aO89116 Gm24208-201ENSMUST00000082783 135 ntBASIC1.23□□□□□ -2.21
Vti1aO89116 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Vti1aO89116 Gm24431-201ENSMUST00000104073 66 ntBASIC1.22□□□□□ -2.21
Vti1aO89116 Gm25715-201ENSMUST00000158627 125 ntBASIC1.22□□□□□ -2.21
Vti1aO89116 Gm42506-201ENSMUST00000202009 150 ntBASIC1.22□□□□□ -2.21
Vti1aO89116 Gm44211-201ENSMUST00000204867 145 ntBASIC1.22□□□□□ -2.21
Vti1aO89116 Gm25138-201ENSMUST00000083248 136 ntBASIC1.22□□□□□ -2.21
Vti1aO89116 Mir29a-201ENSMUST00000083676 88 ntBASIC1.22□□□□□ -2.21
Vti1aO89116 Gm5581-201ENSMUST00000072940 2550 ntBASIC1.22□□□□□ -2.21
Vti1aO89116 Gm23989-201ENSMUST00000117030 66 ntBASIC1.21□□□□□ -2.22
Vti1aO89116 Gm22565-201ENSMUST00000175540 69 ntBASIC1.21□□□□□ -2.22
Vti1aO89116 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.21□□□□□ -2.22
Vti1aO89116 Gm22788-201ENSMUST00000157876 61 ntBASIC1.2□□□□□ -2.22
Vti1aO89116 Gm26363-201ENSMUST00000158866 83 ntBASIC1.2□□□□□ -2.22
Vti1aO89116 Gm23416-201ENSMUST00000175520 95 ntBASIC1.2□□□□□ -2.22
Vti1aO89116 Gm43927-201ENSMUST00000204599 117 ntBASIC1.2□□□□□ -2.22
Vti1aO89116 Mir33-201ENSMUST00000083531 69 ntBASIC1.2□□□□□ -2.22
Vti1aO89116 Gm24697-201ENSMUST00000083881 107 ntBASIC1.2□□□□□ -2.22
Vti1aO89116 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC1.2□□□□□ -2.22
Vti1aO89116 Mir509-201ENSMUST00000196089 75 ntBASIC1.19□□□□□ -2.22
Vti1aO89116 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
Vti1aO89116 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
Vti1aO89116 Gm26478-201ENSMUST00000122611 133 ntBASIC1.18□□□□□ -2.22
Vti1aO89116 Gm23991-201ENSMUST00000117033 93 ntBASIC1.17□□□□□ -2.22
Vti1aO89116 Gm23817-201ENSMUST00000158449 104 ntBASIC1.17□□□□□ -2.22
Vti1aO89116 Gm24637-201ENSMUST00000158674 85 ntBASIC1.17□□□□□ -2.22
Vti1aO89116 Gm23369-201ENSMUST00000175406 105 ntBASIC1.17□□□□□ -2.22
Vti1aO89116 Snord50a-201ENSMUST00000178154 72 ntBASIC1.17□□□□□ -2.22
Vti1aO89116 Gm24463-201ENSMUST00000178417 72 ntBASIC1.17□□□□□ -2.22
Vti1aO89116 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Vti1aO89116 Mir7663-201ENSMUST00000183950 61 ntBASIC1.17□□□□□ -2.22
Vti1aO89116 Mir344-201ENSMUST00000083634 95 ntBASIC1.17□□□□□ -2.22
Vti1aO89116 Gm25040-201ENSMUST00000103877 66 ntBASIC1.16□□□□□ -2.22
Vti1aO89116 Mir1904-201ENSMUST00000122702 80 ntBASIC1.16□□□□□ -2.22
Vti1aO89116 Gm22605-201ENSMUST00000158289 108 ntBASIC1.16□□□□□ -2.22
Vti1aO89116 Gm25229-201ENSMUST00000178587 79 ntBASIC1.16□□□□□ -2.22
Vti1aO89116 Mir6985-201ENSMUST00000184641 61 ntBASIC1.16□□□□□ -2.22
Vti1aO89116 Gm27686-201ENSMUST00000185123 91 ntBASIC1.16□□□□□ -2.22
Vti1aO89116 Snora75-201ENSMUST00000082903 133 ntBASIC1.16□□□□□ -2.22
Vti1aO89116 Snord35a-201ENSMUST00000083884 90 ntBASIC1.16□□□□□ -2.22
Vti1aO89116 Gm25496-201ENSMUST00000104430 120 ntBASIC1.15□□□□□ -2.23
Vti1aO89116 Gm23528-201ENSMUST00000104571 132 ntBASIC1.15□□□□□ -2.23
Vti1aO89116 Gm24183-201ENSMUST00000122572 93 ntBASIC1.15□□□□□ -2.23
Vti1aO89116 Gm24384-201ENSMUST00000122693 75 ntBASIC1.15□□□□□ -2.23
Vti1aO89116 Gm24073-201ENSMUST00000158177 106 ntBASIC1.15□□□□□ -2.23
Vti1aO89116 Mir3070a-201ENSMUST00000175468 89 ntBASIC1.15□□□□□ -2.23
Vti1aO89116 Gm20108-201ENSMUST00000219977 153 ntBASIC1.15□□□□□ -2.23
Vti1aO89116 Gm24342-201ENSMUST00000103907 104 ntBASIC1.14□□□□□ -2.23
Vti1aO89116 Gm25506-201ENSMUST00000104339 70 ntBASIC1.14□□□□□ -2.23
Vti1aO89116 Gm22520-201ENSMUST00000158269 129 ntBASIC1.14□□□□□ -2.23
Vti1aO89116 Mir1949-202ENSMUST00000199259 70 ntBASIC1.14□□□□□ -2.23
Vti1aO89116 Snord32a-201ENSMUST00000083285 83 ntBASIC1.14□□□□□ -2.23
Vti1aO89116 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
Vti1aO89116 Gm22677-201ENSMUST00000116977 108 ntBASIC1.13□□□□□ -2.23
Vti1aO89116 Gm25300-201ENSMUST00000175284 84 ntBASIC1.13□□□□□ -2.23
Vti1aO89116 Gm27639-201ENSMUST00000184937 85 ntBASIC1.13□□□□□ -2.23
Vti1aO89116 Gm43907-201ENSMUST00000203128 117 ntBASIC1.13□□□□□ -2.23
Vti1aO89116 Mir27b-201ENSMUST00000083541 73 ntBASIC1.13□□□□□ -2.23
Vti1aO89116 Gm24777-201ENSMUST00000157644 107 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 136.7 ms