Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm29047-201ENSMUST00000189816 108 ntBASIC0.09□□□□□ -2.4
Smarce1O54941 Gm44345-201ENSMUST00000199560 135 ntBASIC0.09□□□□□ -2.4
Smarce1O54941 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.08□□□□□ -2.4
Smarce1O54941 Gm22319-201ENSMUST00000157147 122 ntBASIC0.08□□□□□ -2.4
Smarce1O54941 Gm25366-201ENSMUST00000158845 124 ntBASIC0.08□□□□□ -2.4
Smarce1O54941 Mir200b-201ENSMUST00000083615 70 ntBASIC0.08□□□□□ -2.4
Smarce1O54941 Gm25915-201ENSMUST00000104265 126 ntBASIC0.07□□□□□ -2.4
Smarce1O54941 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.07□□□□□ -2.4
Smarce1O54941 Gm24947-201ENSMUST00000158334 110 ntBASIC0.07□□□□□ -2.4
Smarce1O54941 Gm23291-201ENSMUST00000175611 78 ntBASIC0.07□□□□□ -2.4
Smarce1O54941 Mir8116-201ENSMUST00000184134 97 ntBASIC0.07□□□□□ -2.4
Smarce1O54941 Snord95-201ENSMUST00000082846 68 ntBASIC0.07□□□□□ -2.4
Smarce1O54941 Mir1197-201ENSMUST00000117037 120 ntBASIC0.06□□□□□ -2.4
Smarce1O54941 Snord2-201ENSMUST00000157899 69 ntBASIC0.06□□□□□ -2.4
Smarce1O54941 Gm23761-201ENSMUST00000158347 104 ntBASIC0.06□□□□□ -2.4
Smarce1O54941 Gm23020-201ENSMUST00000158766 253 ntBASIC0.06□□□□□ -2.4
Smarce1O54941 Gm22031-201ENSMUST00000116945 126 ntBASIC0.05□□□□□ -2.4
Smarce1O54941 Gm22842-201ENSMUST00000157709 118 ntBASIC0.05□□□□□ -2.4
Smarce1O54941 Gm26712-201ENSMUST00000180813 217 ntBASIC0.05□□□□□ -2.4
Smarce1O54941 Gm22212-201ENSMUST00000158096 106 ntBASIC0.04□□□□□ -2.4
Smarce1O54941 Gm24884-201ENSMUST00000158784 119 ntBASIC0.04□□□□□ -2.4
Smarce1O54941 Gm25633-201ENSMUST00000178565 107 ntBASIC0.04□□□□□ -2.4
Smarce1O54941 Gm22509-201ENSMUST00000082775 107 ntBASIC0.04□□□□□ -2.4
Smarce1O54941 Gm23434-201ENSMUST00000157179 100 ntBASIC0.03□□□□□ -2.4
Smarce1O54941 Gm25425-201ENSMUST00000157611 96 ntBASIC0.03□□□□□ -2.4
Smarce1O54941 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
Smarce1O54941 Gm43977-201ENSMUST00000203970 189 ntBASIC0.03□□□□□ -2.4
Smarce1O54941 Gm24468-201ENSMUST00000104489 104 ntBASIC0.02□□□□□ -2.41
Smarce1O54941 Gm25703-201ENSMUST00000083123 151 ntBASIC0.02□□□□□ -2.41
Smarce1O54941 n-R5s12-201ENSMUST00000083785 119 ntBASIC0.02□□□□□ -2.41
Smarce1O54941 Gm25756-201ENSMUST00000103990 136 ntBASIC0.01□□□□□ -2.41
Smarce1O54941 Gm24916-201ENSMUST00000157287 79 ntBASIC0.01□□□□□ -2.41
Smarce1O54941 Gm25978-201ENSMUST00000158698 90 ntBASIC0.01□□□□□ -2.41
Smarce1O54941 Gm26007-201ENSMUST00000158798 120 ntBASIC0.01□□□□□ -2.41
Smarce1O54941 Gm43885-201ENSMUST00000204928 2542 ntBASIC0.01□□□□□ -2.41
Smarce1O54941 Gm22368-201ENSMUST00000102416 109 ntBASIC0□□□□□ -2.41
Smarce1O54941 Gm24772-201ENSMUST00000158507 110 ntBASIC0□□□□□ -2.41
Smarce1O54941 Gm25161-201ENSMUST00000158913 132 ntBASIC0□□□□□ -2.41
Smarce1O54941 Gm27980-201ENSMUST00000184094 169 ntBASIC0□□□□□ -2.41
Smarce1O54941 Mir3967-201ENSMUST00000198710 68 ntBASIC0□□□□□ -2.41
Smarce1O54941 Gm25791-201ENSMUST00000083292 137 ntBASIC0□□□□□ -2.41
Smarce1O54941 Gm23788-201ENSMUST00000122535 106 ntBASIC-0.01□□□□□ -2.41
Smarce1O54941 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.01□□□□□ -2.41
Smarce1O54941 Mir196a-2-201ENSMUST00000083554 85 ntBASIC-0.01□□□□□ -2.41
Smarce1O54941 Mir29a-201ENSMUST00000083676 88 ntBASIC-0.01□□□□□ -2.41
Smarce1O54941 Gm24555-201ENSMUST00000104548 124 ntBASIC-0.02□□□□□ -2.41
Smarce1O54941 Mir7079-201ENSMUST00000184697 69 ntBASIC-0.02□□□□□ -2.41
Smarce1O54941 Mir6896-201ENSMUST00000198033 73 ntBASIC-0.02□□□□□ -2.41
Smarce1O54941 Mir3065-201ENSMUST00000198674 87 ntBASIC-0.02□□□□□ -2.41
Smarce1O54941 Gm22100-201ENSMUST00000157926 63 ntBASIC-0.03□□□□□ -2.41
Smarce1O54941 Gm25496-201ENSMUST00000104430 120 ntBASIC-0.04□□□□□ -2.42
Smarce1O54941 Gm23350-201ENSMUST00000158429 103 ntBASIC-0.04□□□□□ -2.42
Smarce1O54941 Mir509-201ENSMUST00000196089 75 ntBASIC-0.04□□□□□ -2.42
Smarce1O54941 Gm23678-201ENSMUST00000083157 107 ntBASIC-0.04□□□□□ -2.42
Smarce1O54941 Snord85-201ENSMUST00000083262 73 ntBASIC-0.04□□□□□ -2.42
Smarce1O54941 Gm24676-201ENSMUST00000158758 75 ntBASIC-0.05□□□□□ -2.42
Smarce1O54941 Mir363-201ENSMUST00000093598 75 ntBASIC-0.05□□□□□ -2.42
Smarce1O54941 Gm26478-201ENSMUST00000122611 133 ntBASIC-0.06□□□□□ -2.42
Smarce1O54941 Gm24894-201ENSMUST00000122744 118 ntBASIC-0.06□□□□□ -2.42
Smarce1O54941 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
Smarce1O54941 Gm24288-201ENSMUST00000157630 144 ntBASIC-0.06□□□□□ -2.42
Smarce1O54941 Gm23044-201ENSMUST00000157891 100 ntBASIC-0.06□□□□□ -2.42
Smarce1O54941 Gm38208-201ENSMUST00000192476 114 ntBASIC-0.06□□□□□ -2.42
Smarce1O54941 Gm25889-201ENSMUST00000157775 107 ntBASIC-0.07□□□□□ -2.42
Smarce1O54941 Gm22203-201ENSMUST00000158605 58 ntBASIC-0.07□□□□□ -2.42
Smarce1O54941 AC157602.1-201ENSMUST00000197446 105 ntBASIC-0.07□□□□□ -2.42
Smarce1O54941 Gm24983-201ENSMUST00000104457 69 ntBASIC-0.08□□□□□ -2.42
Smarce1O54941 Gm25055-201ENSMUST00000157369 76 ntBASIC-0.08□□□□□ -2.42
Smarce1O54941 Gm44328-201ENSMUST00000199331 75 ntBASIC-0.08□□□□□ -2.42
Smarce1O54941 Gm26438-201ENSMUST00000082593 107 ntBASIC-0.08□□□□□ -2.42
Smarce1O54941 Traj9-201ENSMUST00000103731 58 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
Smarce1O54941 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.09□□□□□ -2.42
Smarce1O54941 Gm23783-201ENSMUST00000157941 102 ntBASIC-0.09□□□□□ -2.42
Smarce1O54941 mt-Tn-201ENSMUST00000082399 71 ntBASIC-0.09□□□□□ -2.42
Smarce1O54941 Gm26454-201ENSMUST00000082682 107 ntBASIC-0.09□□□□□ -2.42
Smarce1O54941 Gm23060-201ENSMUST00000102345 109 ntBASIC-0.1□□□□□ -2.43
Smarce1O54941 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.1□□□□□ -2.43
Smarce1O54941 AC125190.3-201ENSMUST00000223224 121 ntBASIC-0.1□□□□□ -2.43
Smarce1O54941 Gm24202-201ENSMUST00000082948 103 ntBASIC-0.1□□□□□ -2.43
Smarce1O54941 Mir7-1-201ENSMUST00000083500 108 ntBASIC-0.1□□□□□ -2.43
Smarce1O54941 Mir369-201ENSMUST00000083627 79 ntBASIC-0.1□□□□□ -2.43
Smarce1O54941 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.11□□□□□ -2.43
Smarce1O54941 Gm25160-201ENSMUST00000158914 102 ntBASIC-0.11□□□□□ -2.43
Smarce1O54941 Mir6237-201ENSMUST00000183808 91 ntBASIC-0.11□□□□□ -2.43
Smarce1O54941 Gm45374-201ENSMUST00000211388 136 ntBASIC-0.11□□□□□ -2.43
Smarce1O54941 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.12□□□□□ -2.43
Smarce1O54941 Gm25656-201ENSMUST00000158466 66 ntBASIC-0.13□□□□□ -2.43
Smarce1O54941 Gm22406-201ENSMUST00000174923 93 ntBASIC-0.13□□□□□ -2.43
Smarce1O54941 Gm23966-201ENSMUST00000179823 107 ntBASIC-0.13□□□□□ -2.43
Smarce1O54941 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.13□□□□□ -2.43
Smarce1O54941 Gm25812-201ENSMUST00000082751 103 ntBASIC-0.13□□□□□ -2.43
Smarce1O54941 Gm25337-201ENSMUST00000083723 104 ntBASIC-0.13□□□□□ -2.43
Smarce1O54941 Gm22720-201ENSMUST00000122710 87 ntBASIC-0.14□□□□□ -2.43
Smarce1O54941 Gm23159-201ENSMUST00000175088 77 ntBASIC-0.14□□□□□ -2.43
Smarce1O54941 Gm25993-201ENSMUST00000175391 80 ntBASIC-0.14□□□□□ -2.43
Smarce1O54941 Gm24926-201ENSMUST00000178053 79 ntBASIC-0.14□□□□□ -2.43
Smarce1O54941 Gm22632-201ENSMUST00000178266 79 ntBASIC-0.14□□□□□ -2.43
Smarce1O54941 Gm25646-201ENSMUST00000178527 79 ntBASIC-0.14□□□□□ -2.43
Smarce1O54941 AC158982.2-201ENSMUST00000226283 184 ntBASIC-0.14□□□□□ -2.43
Smarce1O54941 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC-0.14□□□□□ -2.43
Retrieved 100 of 76,532 protein–RNA pairs in 195 ms