Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm26712-201ENSMUST00000180813 217 ntBASIC1.5□□□□□ -2.17
Ccdc9bA3KGF9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ccdc9bA3KGF9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.49□□□□□ -2.17
Ccdc9bA3KGF9 Gm22788-201ENSMUST00000157876 61 ntBASIC1.49□□□□□ -2.17
Ccdc9bA3KGF9 Gm27265-201ENSMUST00000183559 77 ntBASIC1.49□□□□□ -2.17
Ccdc9bA3KGF9 Gm27987-201ENSMUST00000184023 93 ntBASIC1.49□□□□□ -2.17
Ccdc9bA3KGF9 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.49□□□□□ -2.17
Ccdc9bA3KGF9 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.49□□□□□ -2.17
Ccdc9bA3KGF9 Snord69-201ENSMUST00000104024 80 ntBASIC1.48□□□□□ -2.17
Ccdc9bA3KGF9 Gm25496-201ENSMUST00000104430 120 ntBASIC1.48□□□□□ -2.17
Ccdc9bA3KGF9 Gm25322-201ENSMUST00000122556 104 ntBASIC1.48□□□□□ -2.17
Ccdc9bA3KGF9 Gm24549-201ENSMUST00000158647 139 ntBASIC1.48□□□□□ -2.17
Ccdc9bA3KGF9 Gm38323-201ENSMUST00000192450 210 ntBASIC1.48□□□□□ -2.17
Ccdc9bA3KGF9 Gm24162-201ENSMUST00000093665 102 ntBASIC1.48□□□□□ -2.17
Ccdc9bA3KGF9 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.48□□□□□ -2.17
Ccdc9bA3KGF9 Mir216b-201ENSMUST00000102363 86 ntBASIC1.47□□□□□ -2.17
Ccdc9bA3KGF9 Gm25542-201ENSMUST00000116889 94 ntBASIC1.47□□□□□ -2.17
Ccdc9bA3KGF9 Gm24674-201ENSMUST00000179194 104 ntBASIC1.47□□□□□ -2.17
Ccdc9bA3KGF9 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.47□□□□□ -2.17
Ccdc9bA3KGF9 Gm25798-201ENSMUST00000082641 107 ntBASIC1.47□□□□□ -2.17
Ccdc9bA3KGF9 Gm25854-201ENSMUST00000082792 72 ntBASIC1.47□□□□□ -2.17
Ccdc9bA3KGF9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Ccdc9bA3KGF9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.46□□□□□ -2.18
Ccdc9bA3KGF9 Gm25968-201ENSMUST00000157167 100 ntBASIC1.46□□□□□ -2.18
Ccdc9bA3KGF9 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.46□□□□□ -2.18
Ccdc9bA3KGF9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ccdc9bA3KGF9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.45□□□□□ -2.18
Ccdc9bA3KGF9 Gm23715-201ENSMUST00000157354 106 ntBASIC1.45□□□□□ -2.18
Ccdc9bA3KGF9 Gm22539-201ENSMUST00000158167 117 ntBASIC1.45□□□□□ -2.18
Ccdc9bA3KGF9 Gm23291-201ENSMUST00000175611 78 ntBASIC1.45□□□□□ -2.18
Ccdc9bA3KGF9 Mir7059-201ENSMUST00000184825 59 ntBASIC1.45□□□□□ -2.18
Ccdc9bA3KGF9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.45□□□□□ -2.18
Ccdc9bA3KGF9 Gm25128-201ENSMUST00000083339 76 ntBASIC1.45□□□□□ -2.18
Ccdc9bA3KGF9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
Ccdc9bA3KGF9 Gm25740-201ENSMUST00000180247 107 ntBASIC1.44□□□□□ -2.18
Ccdc9bA3KGF9 Mir7052-201ENSMUST00000184821 65 ntBASIC1.44□□□□□ -2.18
Ccdc9bA3KGF9 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.44□□□□□ -2.18
Ccdc9bA3KGF9 Gm24202-201ENSMUST00000082948 103 ntBASIC1.44□□□□□ -2.18
Ccdc9bA3KGF9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.44□□□□□ -2.18
Ccdc9bA3KGF9 Gm23347-201ENSMUST00000083823 82 ntBASIC1.44□□□□□ -2.18
Ccdc9bA3KGF9 Mir500-201ENSMUST00000093600 92 ntBASIC1.44□□□□□ -2.18
Ccdc9bA3KGF9 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Ccdc9bA3KGF9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.43□□□□□ -2.18
Ccdc9bA3KGF9 Gm25870-201ENSMUST00000179845 79 ntBASIC1.43□□□□□ -2.18
Ccdc9bA3KGF9 Gm24311-201ENSMUST00000082570 104 ntBASIC1.43□□□□□ -2.18
Ccdc9bA3KGF9 Mir34c-201ENSMUST00000083653 77 ntBASIC1.43□□□□□ -2.18
Ccdc9bA3KGF9 Gm25416-201ENSMUST00000104221 107 ntBASIC1.42□□□□□ -2.18
Ccdc9bA3KGF9 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Ccdc9bA3KGF9 Gm6272-201ENSMUST00000121256 171 ntBASIC1.42□□□□□ -2.18
Ccdc9bA3KGF9 Gm22233-201ENSMUST00000157464 114 ntBASIC1.42□□□□□ -2.18
Ccdc9bA3KGF9 Gm25868-201ENSMUST00000158253 114 ntBASIC1.42□□□□□ -2.18
Ccdc9bA3KGF9 Gm28383-201ENSMUST00000187563 139 ntBASIC1.42□□□□□ -2.18
Ccdc9bA3KGF9 Gm26207-201ENSMUST00000082909 104 ntBASIC1.42□□□□□ -2.18
Ccdc9bA3KGF9 Gm24342-201ENSMUST00000103907 104 ntBASIC1.41□□□□□ -2.18
Ccdc9bA3KGF9 Gm26301-201ENSMUST00000104813 95 ntBASIC1.41□□□□□ -2.18
Ccdc9bA3KGF9 Gm23329-201ENSMUST00000157415 108 ntBASIC1.41□□□□□ -2.18
Ccdc9bA3KGF9 Gm24154-201ENSMUST00000175261 130 ntBASIC1.41□□□□□ -2.18
Ccdc9bA3KGF9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.41□□□□□ -2.18
Ccdc9bA3KGF9 Mir6394-201ENSMUST00000184738 99 ntBASIC1.41□□□□□ -2.18
Ccdc9bA3KGF9 Gm43907-201ENSMUST00000203128 117 ntBASIC1.41□□□□□ -2.18
Ccdc9bA3KGF9 Mir377-201ENSMUST00000083504 68 ntBASIC1.41□□□□□ -2.18
Ccdc9bA3KGF9 Gm23991-201ENSMUST00000117033 93 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Gm24199-201ENSMUST00000157808 136 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Gm22100-201ENSMUST00000157926 63 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Gm22522-201ENSMUST00000158271 151 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Mir100-201ENSMUST00000175270 80 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Gm27415-201ENSMUST00000183720 95 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Gm24624-201ENSMUST00000082617 164 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Snora75-201ENSMUST00000082903 133 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Mir320-201ENSMUST00000083594 82 ntBASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Ccdc9bA3KGF9 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Snord71-201ENSMUST00000104361 85 ntBASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Gm23336-201ENSMUST00000117023 123 ntBASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Gm25622-201ENSMUST00000157217 104 ntBASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Gm24868-201ENSMUST00000157265 136 ntBASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Gm26181-201ENSMUST00000157687 106 ntBASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Gm24077-201ENSMUST00000158183 136 ntBASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Gm27248-201ENSMUST00000184004 166 ntBASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Gm27656-201ENSMUST00000185055 80 ntBASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Ccdc9bA3KGF9 Gm43960-201ENSMUST00000204249 5020 ntBASIC1.38□□□□□ -2.19
Ccdc9bA3KGF9 Mir343-201ENSMUST00000102360 75 ntBASIC1.38□□□□□ -2.19
Ccdc9bA3KGF9 Gm25366-201ENSMUST00000158845 124 ntBASIC1.38□□□□□ -2.19
Ccdc9bA3KGF9 Mir3079-201ENSMUST00000175428 90 ntBASIC1.38□□□□□ -2.19
Ccdc9bA3KGF9 Mir376b-201ENSMUST00000195930 82 ntBASIC1.38□□□□□ -2.19
Ccdc9bA3KGF9 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Ccdc9bA3KGF9 Gm23328-201ENSMUST00000157418 132 ntBASIC1.37□□□□□ -2.19
Ccdc9bA3KGF9 Gm24174-201ENSMUST00000158933 111 ntBASIC1.37□□□□□ -2.19
Ccdc9bA3KGF9 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.37□□□□□ -2.19
Ccdc9bA3KGF9 Mir344-201ENSMUST00000083634 95 ntBASIC1.37□□□□□ -2.19
Ccdc9bA3KGF9 Gm25040-201ENSMUST00000103877 66 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 Gm22786-201ENSMUST00000104086 122 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 Gm25417-201ENSMUST00000104212 131 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 Gm23122-201ENSMUST00000157645 103 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 Gm22540-201ENSMUST00000158168 117 ntBASIC1.36□□□□□ -2.19
Ccdc9bA3KGF9 Gm23853-201ENSMUST00000158375 104 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 166.1 ms