Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Gm23900-201ENSMUST00000157569 108 ntBASIC0.3□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm23180-201ENSMUST00000158686 125 ntBASIC0.3□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm3702-201ENSMUST00000211754 346 ntBASIC0.3□□□□□ -2.36
Ighv3-4A0A0A6YXF1 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.3□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm26421-201ENSMUST00000104279 132 ntBASIC0.29□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm26133-201ENSMUST00000157363 100 ntBASIC0.29□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Mir5124a-201ENSMUST00000175528 72 ntBASIC0.29□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Mir6896-201ENSMUST00000198033 73 ntBASIC0.29□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm23969-201ENSMUST00000083324 74 ntBASIC0.29□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm24468-201ENSMUST00000104489 104 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm23531-201ENSMUST00000104567 68 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm23994-201ENSMUST00000158059 88 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm25920-201ENSMUST00000158307 99 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm24947-201ENSMUST00000158334 110 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm22088-201ENSMUST00000158341 117 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm25014-201ENSMUST00000158401 103 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm25618-201ENSMUST00000179484 107 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm43927-201ENSMUST00000204599 117 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm25635-201ENSMUST00000082675 131 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm22303-201ENSMUST00000082686 122 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Gm26062-201ENSMUST00000083379 107 ntBASIC0.28□□□□□ -2.36
Ighv3-4A0A0A6YXF1 Mir710-201ENSMUST00000102088 110 ntBASIC0.27□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Mir669f-201ENSMUST00000103850 121 ntBASIC0.27□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm25428-201ENSMUST00000157608 114 ntBASIC0.27□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm24167-201ENSMUST00000177733 124 ntBASIC0.27□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm24028-201ENSMUST00000178991 124 ntBASIC0.27□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm27475-201ENSMUST00000183420 61 ntBASIC0.27□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Mir7065-201ENSMUST00000185110 61 ntBASIC0.27□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm23344-201ENSMUST00000083818 68 ntBASIC0.27□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.27□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm24686-201ENSMUST00000157755 93 ntBASIC0.26□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm25370-201ENSMUST00000158159 94 ntBASIC0.26□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm25408-201ENSMUST00000104104 133 ntBASIC0.25□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm25978-201ENSMUST00000158698 90 ntBASIC0.25□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm42845-201ENSMUST00000197766 105 ntBASIC0.25□□□□□ -2.37
Ighv3-4A0A0A6YXF1 AC158982.2-201ENSMUST00000226283 184 ntBASIC0.25□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Mir670-201ENSMUST00000102380 100 ntBASIC0.24□□□□□ -2.37
Ighv3-4A0A0A6YXF1 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.24□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm24648-201ENSMUST00000157111 132 ntBASIC0.24□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm23278-201ENSMUST00000157911 143 ntBASIC0.24□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm44327-201ENSMUST00000200068 117 ntBASIC0.24□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm43977-201ENSMUST00000203970 189 ntBASIC0.24□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm24894-201ENSMUST00000122744 118 ntBASIC0.23□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm26152-201ENSMUST00000157427 101 ntBASIC0.23□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm24467-201ENSMUST00000157887 126 ntBASIC0.23□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm43907-201ENSMUST00000203128 117 ntBASIC0.23□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Ighv3-4A0A0A6YXF1 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.23□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Mir369-201ENSMUST00000083627 79 ntBASIC0.23□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm25497-201ENSMUST00000104425 132 ntBASIC0.22□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm22212-201ENSMUST00000158096 106 ntBASIC0.22□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Scarna8-201ENSMUST00000158333 131 ntBASIC0.22□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm24926-201ENSMUST00000178053 79 ntBASIC0.22□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm22632-201ENSMUST00000178266 79 ntBASIC0.22□□□□□ -2.37
Ighv3-4A0A0A6YXF1 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.22□□□□□ -2.37
Ighv3-4A0A0A6YXF1 Gm24833-201ENSMUST00000116775 120 ntBASIC0.21□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm26712-201ENSMUST00000180813 217 ntBASIC0.21□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.2□□□□□ -2.38
Ighv3-4A0A0A6YXF1 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.2□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm23138-201ENSMUST00000083365 103 ntBASIC0.2□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm23012-201ENSMUST00000104149 83 ntBASIC0.19□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm25366-201ENSMUST00000158845 124 ntBASIC0.19□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm23291-201ENSMUST00000175611 78 ntBASIC0.19□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.18□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Snord2-201ENSMUST00000157899 69 ntBASIC0.18□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.18□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Mir3108-201ENSMUST00000175500 79 ntBASIC0.18□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm25646-201ENSMUST00000178527 79 ntBASIC0.18□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Mir7-1-201ENSMUST00000083500 108 ntBASIC0.18□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm22048-201ENSMUST00000104721 89 ntBASIC0.17□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm23821-201ENSMUST00000158738 106 ntBASIC0.17□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm28001-201ENSMUST00000183561 117 ntBASIC0.17□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm22055-201ENSMUST00000083388 107 ntBASIC0.17□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Mir18-201ENSMUST00000083469 96 ntBASIC0.17□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Mir29a-201ENSMUST00000083676 88 ntBASIC0.17□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm25889-201ENSMUST00000157775 107 ntBASIC0.16□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Mir6365-201ENSMUST00000183990 101 ntBASIC0.16□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm22981-201ENSMUST00000082611 75 ntBASIC0.16□□□□□ -2.38
Ighv3-4A0A0A6YXF1 Gm23653-201ENSMUST00000116751 97 ntBASIC0.15□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm26478-201ENSMUST00000122611 133 ntBASIC0.15□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm22070-201ENSMUST00000178475 107 ntBASIC0.15□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm44803-201ENSMUST00000204384 156 ntBASIC0.15□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Mir466-201ENSMUST00000093591 73 ntBASIC0.15□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm25885-201ENSMUST00000157779 109 ntBASIC0.14□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Mir6237-201ENSMUST00000183808 91 ntBASIC0.14□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Mir509-201ENSMUST00000196089 75 ntBASIC0.14□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm42844-201ENSMUST00000200355 112 ntBASIC0.14□□□□□ -2.39
Ighv3-4A0A0A6YXF1 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.14□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm23020-201ENSMUST00000158766 253 ntBASIC0.13□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm25337-201ENSMUST00000083723 104 ntBASIC0.13□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm25089-201ENSMUST00000102015 79 ntBASIC0.12□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm24605-201ENSMUST00000104772 96 ntBASIC0.12□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm22490-201ENSMUST00000157188 119 ntBASIC0.12□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm23761-201ENSMUST00000158347 104 ntBASIC0.12□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm25840-201ENSMUST00000177821 79 ntBASIC0.12□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm24952-201ENSMUST00000177909 79 ntBASIC0.12□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm23682-201ENSMUST00000178146 79 ntBASIC0.12□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm24652-201ENSMUST00000178223 79 ntBASIC0.12□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm22629-201ENSMUST00000178272 79 ntBASIC0.12□□□□□ -2.39
Ighv3-4A0A0A6YXF1 Gm24021-201ENSMUST00000178435 79 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 133.2 ms