Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Gm22319-201ENSMUST00000157147 122 ntBASIC0.35□□□□□ -2.35
H2afb1S4R1E0 Gm23434-201ENSMUST00000157179 100 ntBASIC0.35□□□□□ -2.35
H2afb1S4R1E0 Gm24916-201ENSMUST00000157287 79 ntBASIC0.35□□□□□ -2.35
H2afb1S4R1E0 Gm27297-201ENSMUST00000183395 105 ntBASIC0.35□□□□□ -2.35
H2afb1S4R1E0 Gm38295-201ENSMUST00000191951 151 ntBASIC0.35□□□□□ -2.35
H2afb1S4R1E0 Snord78-201ENSMUST00000104032 66 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm24233-201ENSMUST00000104317 122 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm23605-201ENSMUST00000157255 127 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm25887-201ENSMUST00000157777 84 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm22788-201ENSMUST00000157876 61 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm25976-201ENSMUST00000158695 130 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm22503-201ENSMUST00000158983 115 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm7258-201ENSMUST00000179317 300 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm25635-201ENSMUST00000082675 131 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm25629-201ENSMUST00000084001 107 ntBASIC0.34□□□□□ -2.36
H2afb1S4R1E0 Gm25425-201ENSMUST00000157611 96 ntBASIC0.33□□□□□ -2.36
H2afb1S4R1E0 Gm25920-201ENSMUST00000158307 99 ntBASIC0.33□□□□□ -2.36
H2afb1S4R1E0 Mir3105-201ENSMUST00000175480 85 ntBASIC0.33□□□□□ -2.36
H2afb1S4R1E0 Snord80-201ENSMUST00000083801 81 ntBASIC0.33□□□□□ -2.36
H2afb1S4R1E0 Gm22759-201ENSMUST00000102276 96 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Gm23654-201ENSMUST00000116758 126 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Gm23601-201ENSMUST00000157259 131 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Gm24686-201ENSMUST00000157755 93 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Gm24399-201ENSMUST00000157869 74 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Gm25370-201ENSMUST00000158159 94 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Gm22983-201ENSMUST00000158308 104 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Gm23340-201ENSMUST00000158955 123 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Gm42845-201ENSMUST00000197766 105 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Mirlet7g-201ENSMUST00000083506 88 ntBASIC0.32□□□□□ -2.36
H2afb1S4R1E0 Gm24468-201ENSMUST00000104489 104 ntBASIC0.31□□□□□ -2.36
H2afb1S4R1E0 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.31□□□□□ -2.36
H2afb1S4R1E0 Gm24258-201ENSMUST00000083739 133 ntBASIC0.31□□□□□ -2.36
H2afb1S4R1E0 Gm24278-201ENSMUST00000104239 127 ntBASIC0.3□□□□□ -2.36
H2afb1S4R1E0 Snord71-201ENSMUST00000104361 85 ntBASIC0.3□□□□□ -2.36
H2afb1S4R1E0 Gm23672-201ENSMUST00000157471 107 ntBASIC0.3□□□□□ -2.36
H2afb1S4R1E0 Gm25428-201ENSMUST00000157608 114 ntBASIC0.3□□□□□ -2.36
H2afb1S4R1E0 Gm24963-201ENSMUST00000157916 144 ntBASIC0.3□□□□□ -2.36
H2afb1S4R1E0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.3□□□□□ -2.36
H2afb1S4R1E0 Gm27943-201ENSMUST00000184844 116 ntBASIC0.3□□□□□ -2.36
H2afb1S4R1E0 Gm22652-201ENSMUST00000083207 131 ntBASIC0.3□□□□□ -2.36
H2afb1S4R1E0 Gm23900-201ENSMUST00000157569 108 ntBASIC0.29□□□□□ -2.36
H2afb1S4R1E0 Gm25014-201ENSMUST00000158401 103 ntBASIC0.29□□□□□ -2.36
H2afb1S4R1E0 Gm26712-201ENSMUST00000180813 217 ntBASIC0.29□□□□□ -2.36
H2afb1S4R1E0 Gm27475-201ENSMUST00000183420 61 ntBASIC0.29□□□□□ -2.36
H2afb1S4R1E0 Mir7065-201ENSMUST00000185110 61 ntBASIC0.29□□□□□ -2.36
H2afb1S4R1E0 Gm26152-201ENSMUST00000157427 101 ntBASIC0.28□□□□□ -2.36
H2afb1S4R1E0 Gm24947-201ENSMUST00000158334 110 ntBASIC0.28□□□□□ -2.36
H2afb1S4R1E0 Gm24167-201ENSMUST00000177733 124 ntBASIC0.28□□□□□ -2.36
H2afb1S4R1E0 Gm24028-201ENSMUST00000178991 124 ntBASIC0.28□□□□□ -2.36
H2afb1S4R1E0 Gm22303-201ENSMUST00000082686 122 ntBASIC0.28□□□□□ -2.36
H2afb1S4R1E0 Gm43977-201ENSMUST00000203970 189 ntBASIC0.27□□□□□ -2.37
H2afb1S4R1E0 Gm26062-201ENSMUST00000083379 107 ntBASIC0.27□□□□□ -2.37
H2afb1S4R1E0 Gm24648-201ENSMUST00000157111 132 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 Gm26133-201ENSMUST00000157363 100 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 Gm26116-201ENSMUST00000175600 77 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 Gm25618-201ENSMUST00000179484 107 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 Gm44327-201ENSMUST00000200068 117 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 Gm44828-201ENSMUST00000203745 106 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 Gm43927-201ENSMUST00000204599 117 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 Gm3702-201ENSMUST00000211754 346 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 mt-Tc-201ENSMUST00000082400 66 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 Gm23344-201ENSMUST00000083818 68 ntBASIC0.26□□□□□ -2.37
H2afb1S4R1E0 Gm26285-201ENSMUST00000177923 107 ntBASIC0.25□□□□□ -2.37
H2afb1S4R1E0 AC158982.2-201ENSMUST00000226283 184 ntBASIC0.25□□□□□ -2.37
H2afb1S4R1E0 Gm23622-201ENSMUST00000082460 107 ntBASIC0.25□□□□□ -2.37
H2afb1S4R1E0 Gm24208-201ENSMUST00000082783 135 ntBASIC0.25□□□□□ -2.37
H2afb1S4R1E0 Gm23969-201ENSMUST00000083324 74 ntBASIC0.25□□□□□ -2.37
H2afb1S4R1E0 Gm25408-201ENSMUST00000104104 133 ntBASIC0.24□□□□□ -2.37
H2afb1S4R1E0 Gm23708-201ENSMUST00000104367 123 ntBASIC0.24□□□□□ -2.37
H2afb1S4R1E0 Gm24833-201ENSMUST00000116775 120 ntBASIC0.24□□□□□ -2.37
H2afb1S4R1E0 Gm22565-201ENSMUST00000175540 69 ntBASIC0.24□□□□□ -2.37
H2afb1S4R1E0 Gm43907-201ENSMUST00000203128 117 ntBASIC0.24□□□□□ -2.37
H2afb1S4R1E0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.24□□□□□ -2.37
H2afb1S4R1E0 Mir369-201ENSMUST00000083627 79 ntBASIC0.24□□□□□ -2.37
H2afb1S4R1E0 Gm25416-201ENSMUST00000104221 107 ntBASIC0.23□□□□□ -2.37
H2afb1S4R1E0 Gm24894-201ENSMUST00000122744 118 ntBASIC0.23□□□□□ -2.37
H2afb1S4R1E0 Gm22070-201ENSMUST00000178475 107 ntBASIC0.23□□□□□ -2.37
H2afb1S4R1E0 Scarna8-201ENSMUST00000158333 131 ntBASIC0.22□□□□□ -2.37
H2afb1S4R1E0 Gm25978-201ENSMUST00000158698 90 ntBASIC0.22□□□□□ -2.37
H2afb1S4R1E0 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
H2afb1S4R1E0 Mup-ps5-201ENSMUST00000118667 99 ntBASIC0.21□□□□□ -2.38
H2afb1S4R1E0 Gm23012-201ENSMUST00000104149 83 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Snord2-201ENSMUST00000157899 69 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Gm22212-201ENSMUST00000158096 106 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Gm25366-201ENSMUST00000158845 124 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Mir3108-201ENSMUST00000175500 79 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Gm24926-201ENSMUST00000178053 79 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Gm22632-201ENSMUST00000178266 79 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.2□□□□□ -2.38
H2afb1S4R1E0 mt-Tn-201ENSMUST00000082399 71 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Gm22981-201ENSMUST00000082611 75 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Mir29a-201ENSMUST00000083676 88 ntBASIC0.2□□□□□ -2.38
H2afb1S4R1E0 Gm25089-201ENSMUST00000102015 79 ntBASIC0.19□□□□□ -2.38
H2afb1S4R1E0 Gm13577-201ENSMUST00000121365 205 ntBASIC0.19□□□□□ -2.38
H2afb1S4R1E0 Gm23821-201ENSMUST00000158738 106 ntBASIC0.19□□□□□ -2.38
H2afb1S4R1E0 Gm23291-201ENSMUST00000175611 78 ntBASIC0.19□□□□□ -2.38
H2afb1S4R1E0 Gm25840-201ENSMUST00000177821 79 ntBASIC0.19□□□□□ -2.38
H2afb1S4R1E0 Gm24952-201ENSMUST00000177909 79 ntBASIC0.19□□□□□ -2.38
H2afb1S4R1E0 Gm23682-201ENSMUST00000178146 79 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 147.5 ms