Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Mir29a-201ENSMUST00000083676 88 ntBASIC1.88□□□□□ -2.11
Prpf40aQ9R1C7 Gm23528-201ENSMUST00000104571 132 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Gm25056-201ENSMUST00000157372 62 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Gm22551-201ENSMUST00000157795 103 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Gm22386-201ENSMUST00000158192 129 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Gm25974-201ENSMUST00000158701 94 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Mir1933-201ENSMUST00000158930 88 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Gm23339-201ENSMUST00000158962 139 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Gm23289-201ENSMUST00000175615 108 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Mir7679-201ENSMUST00000183379 63 ntBASIC1.87□□□□□ -2.11
Prpf40aQ9R1C7 Gm26478-201ENSMUST00000122611 133 ntBASIC1.86□□□□□ -2.11
Prpf40aQ9R1C7 Gm22983-201ENSMUST00000158308 104 ntBASIC1.86□□□□□ -2.11
Prpf40aQ9R1C7 Snora26-201ENSMUST00000175614 121 ntBASIC1.86□□□□□ -2.11
Prpf40aQ9R1C7 Ranbp2-ps1-201ENSMUST00000184001 403 ntBASIC1.86□□□□□ -2.11
Prpf40aQ9R1C7 Gm25644-201ENSMUST00000083209 107 ntBASIC1.86□□□□□ -2.11
Prpf40aQ9R1C7 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Prpf40aQ9R1C7 Gm23130-201ENSMUST00000104252 74 ntBASIC1.85□□□□□ -2.11
Prpf40aQ9R1C7 Gm26089-201ENSMUST00000157898 107 ntBASIC1.85□□□□□ -2.11
Prpf40aQ9R1C7 Gm26224-201ENSMUST00000082506 80 ntBASIC1.85□□□□□ -2.11
Prpf40aQ9R1C7 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.84□□□□□ -2.12
Prpf40aQ9R1C7 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Prpf40aQ9R1C7 Mir1187-201ENSMUST00000116936 122 ntBASIC1.83□□□□□ -2.12
Prpf40aQ9R1C7 Mir509-201ENSMUST00000196089 75 ntBASIC1.83□□□□□ -2.12
Prpf40aQ9R1C7 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.83□□□□□ -2.12
Prpf40aQ9R1C7 Gm23301-201ENSMUST00000082713 65 ntBASIC1.83□□□□□ -2.12
Prpf40aQ9R1C7 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Prpf40aQ9R1C7 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Prpf40aQ9R1C7 Gm25279-201ENSMUST00000122608 133 ntBASIC1.82□□□□□ -2.12
Prpf40aQ9R1C7 Gm24394-201ENSMUST00000158141 123 ntBASIC1.82□□□□□ -2.12
Prpf40aQ9R1C7 Gm25693-201ENSMUST00000175443 85 ntBASIC1.82□□□□□ -2.12
Prpf40aQ9R1C7 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.82□□□□□ -2.12
Prpf40aQ9R1C7 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Prpf40aQ9R1C7 Gm24271-201ENSMUST00000102327 111 ntBASIC1.81□□□□□ -2.12
Prpf40aQ9R1C7 Gm22030-201ENSMUST00000116942 63 ntBASIC1.81□□□□□ -2.12
Prpf40aQ9R1C7 Gm24183-201ENSMUST00000122572 93 ntBASIC1.81□□□□□ -2.12
Prpf40aQ9R1C7 Gm22603-201ENSMUST00000157603 96 ntBASIC1.81□□□□□ -2.12
Prpf40aQ9R1C7 Gm24290-201ENSMUST00000157634 96 ntBASIC1.81□□□□□ -2.12
Prpf40aQ9R1C7 Gm27898-201ENSMUST00000183987 80 ntBASIC1.81□□□□□ -2.12
Prpf40aQ9R1C7 Gm38295-201ENSMUST00000191951 151 ntBASIC1.81□□□□□ -2.12
Prpf40aQ9R1C7 Gm22458-201ENSMUST00000082576 107 ntBASIC1.81□□□□□ -2.12
Prpf40aQ9R1C7 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Prpf40aQ9R1C7 Gm22466-201ENSMUST00000175278 69 ntBASIC1.8□□□□□ -2.12
Prpf40aQ9R1C7 Gm27248-201ENSMUST00000184004 166 ntBASIC1.8□□□□□ -2.12
Prpf40aQ9R1C7 Gm28435-201ENSMUST00000185496 108 ntBASIC1.8□□□□□ -2.12
Prpf40aQ9R1C7 Gm29047-201ENSMUST00000189816 108 ntBASIC1.8□□□□□ -2.12
Prpf40aQ9R1C7 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.8□□□□□ -2.12
Prpf40aQ9R1C7 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Prpf40aQ9R1C7 Mir301b-201ENSMUST00000102333 97 ntBASIC1.79□□□□□ -2.12
Prpf40aQ9R1C7 Gm22556-201ENSMUST00000157803 100 ntBASIC1.79□□□□□ -2.12
Prpf40aQ9R1C7 Gm24946-201ENSMUST00000158332 106 ntBASIC1.79□□□□□ -2.12
Prpf40aQ9R1C7 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.79□□□□□ -2.12
Prpf40aQ9R1C7 Gm24208-201ENSMUST00000082783 135 ntBASIC1.79□□□□□ -2.12
Prpf40aQ9R1C7 Gm24406-201ENSMUST00000083026 128 ntBASIC1.79□□□□□ -2.12
Prpf40aQ9R1C7 Mir30a-201ENSMUST00000083471 71 ntBASIC1.79□□□□□ -2.12
Prpf40aQ9R1C7 Gm24808-201ENSMUST00000157993 118 ntBASIC1.78□□□□□ -2.12
Prpf40aQ9R1C7 Traj60-201ENSMUST00000167781 54 ntBASIC1.78□□□□□ -2.12
Prpf40aQ9R1C7 Gm26712-201ENSMUST00000180813 217 ntBASIC1.78□□□□□ -2.12
Prpf40aQ9R1C7 Mir6351-201ENSMUST00000183826 99 ntBASIC1.78□□□□□ -2.12
Prpf40aQ9R1C7 Gm43038-201ENSMUST00000202359 88 ntBASIC1.78□□□□□ -2.12
Prpf40aQ9R1C7 Gm24174-201ENSMUST00000158933 111 ntBASIC1.77□□□□□ -2.13
Prpf40aQ9R1C7 Gm28383-201ENSMUST00000187563 139 ntBASIC1.77□□□□□ -2.13
Prpf40aQ9R1C7 Gm43927-201ENSMUST00000204599 117 ntBASIC1.77□□□□□ -2.13
Prpf40aQ9R1C7 Gm22761-201ENSMUST00000102278 96 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Gm26181-201ENSMUST00000157687 106 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Gm22788-201ENSMUST00000157876 61 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Gm22541-201ENSMUST00000158165 127 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Gm24076-201ENSMUST00000158179 94 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Gm24674-201ENSMUST00000179194 104 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Gm16399-201ENSMUST00000181423 219 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Gm27987-201ENSMUST00000184023 93 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Mir148b-201ENSMUST00000083626 97 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Gm24162-201ENSMUST00000093665 102 ntBASIC1.76□□□□□ -2.13
Prpf40aQ9R1C7 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Prpf40aQ9R1C7 Gm25542-201ENSMUST00000116889 94 ntBASIC1.75□□□□□ -2.13
Prpf40aQ9R1C7 Gm25854-201ENSMUST00000082792 72 ntBASIC1.75□□□□□ -2.13
Prpf40aQ9R1C7 Gm25759-201ENSMUST00000103988 129 ntBASIC1.74□□□□□ -2.13
Prpf40aQ9R1C7 Gm25322-201ENSMUST00000122556 104 ntBASIC1.74□□□□□ -2.13
Prpf40aQ9R1C7 Gm24549-201ENSMUST00000158647 139 ntBASIC1.74□□□□□ -2.13
Prpf40aQ9R1C7 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Prpf40aQ9R1C7 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.74□□□□□ -2.13
Prpf40aQ9R1C7 Gm23715-201ENSMUST00000157354 106 ntBASIC1.73□□□□□ -2.13
Prpf40aQ9R1C7 Gm24638-201ENSMUST00000179807 132 ntBASIC1.73□□□□□ -2.13
Prpf40aQ9R1C7 Gm38323-201ENSMUST00000192450 210 ntBASIC1.73□□□□□ -2.13
Prpf40aQ9R1C7 Gm25820-201ENSMUST00000198589 127 ntBASIC1.73□□□□□ -2.13
Prpf40aQ9R1C7 Gm25798-201ENSMUST00000082641 107 ntBASIC1.73□□□□□ -2.13
Prpf40aQ9R1C7 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Prpf40aQ9R1C7 Mir216b-201ENSMUST00000102363 86 ntBASIC1.72□□□□□ -2.13
Prpf40aQ9R1C7 Snord69-201ENSMUST00000104024 80 ntBASIC1.72□□□□□ -2.13
Prpf40aQ9R1C7 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Prpf40aQ9R1C7 Gm22539-201ENSMUST00000158167 117 ntBASIC1.71□□□□□ -2.14
Prpf40aQ9R1C7 Gm23291-201ENSMUST00000175611 78 ntBASIC1.71□□□□□ -2.14
Prpf40aQ9R1C7 Gm25740-201ENSMUST00000180247 107 ntBASIC1.71□□□□□ -2.14
Prpf40aQ9R1C7 Gm27265-201ENSMUST00000183559 77 ntBASIC1.71□□□□□ -2.14
Prpf40aQ9R1C7 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.71□□□□□ -2.14
Prpf40aQ9R1C7 Gm25968-201ENSMUST00000157167 100 ntBASIC1.7□□□□□ -2.14
Prpf40aQ9R1C7 Gm18433-201ENSMUST00000192747 197 ntBASIC1.7□□□□□ -2.14
Prpf40aQ9R1C7 Mir3087-201ENSMUST00000199405 56 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 136 ms