Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Gm44948-201ENSMUST00000209050 149 ntBASIC0.45□□□□□ -2.34
Col4a4Q9QZR9 Gm25091-201ENSMUST00000103997 71 ntBASIC0.44□□□□□ -2.34
Col4a4Q9QZR9 Gm25544-201ENSMUST00000122676 120 ntBASIC0.44□□□□□ -2.34
Col4a4Q9QZR9 Mir3079-201ENSMUST00000175428 90 ntBASIC0.44□□□□□ -2.34
Col4a4Q9QZR9 Gm22801-201ENSMUST00000175624 84 ntBASIC0.44□□□□□ -2.34
Col4a4Q9QZR9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.44□□□□□ -2.34
Col4a4Q9QZR9 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.44□□□□□ -2.34
Col4a4Q9QZR9 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
Col4a4Q9QZR9 Gm23969-201ENSMUST00000083324 74 ntBASIC0.44□□□□□ -2.34
Col4a4Q9QZR9 Gm24030-201ENSMUST00000083931 164 ntBASIC0.44□□□□□ -2.34
Col4a4Q9QZR9 Mir20b-201ENSMUST00000102087 80 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm26338-201ENSMUST00000102372 110 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm16186-201ENSMUST00000120132 216 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm26274-201ENSMUST00000157103 321 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm23036-201ENSMUST00000157885 99 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm24903-201ENSMUST00000158131 126 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm26290-201ENSMUST00000158891 145 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm26398-201ENSMUST00000179015 127 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Mir6369-201ENSMUST00000183772 106 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm28270-201ENSMUST00000188550 109 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm28328-201ENSMUST00000188869 109 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm24705-201ENSMUST00000082808 107 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm24482-201ENSMUST00000117005 93 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm25968-201ENSMUST00000157167 100 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm25887-201ENSMUST00000157777 84 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm25772-201ENSMUST00000158574 56 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm25978-201ENSMUST00000158698 90 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm22638-201ENSMUST00000179674 107 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm38323-201ENSMUST00000192450 210 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Gm24148-201ENSMUST00000082762 80 ntBASIC0.43□□□□□ -2.34
Col4a4Q9QZR9 Snord69-201ENSMUST00000104024 80 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Gm23654-201ENSMUST00000116758 126 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Gm12469-201ENSMUST00000117623 207 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Gm25623-201ENSMUST00000157216 108 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Traj61-201ENSMUST00000165025 72 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Gm27993-201ENSMUST00000184362 85 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Gm24311-201ENSMUST00000082570 104 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Gm23301-201ENSMUST00000082713 65 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Gm26168-201ENSMUST00000083787 112 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Mir500-201ENSMUST00000093600 92 ntBASIC0.42□□□□□ -2.34
Col4a4Q9QZR9 Mir695-201ENSMUST00000102261 109 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 n-R5s39-201ENSMUST00000122613 108 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 Gm23853-201ENSMUST00000158375 104 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 Gm23857-201ENSMUST00000158379 111 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 Gm24129-201ENSMUST00000158537 97 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 Gm17172-201ENSMUST00000171782 190 ntTSL 3 BASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 Gm25646-201ENSMUST00000178527 79 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 Gm25987-201ENSMUST00000083234 107 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 Gm26062-201ENSMUST00000083379 107 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 Gm25629-201ENSMUST00000084001 107 ntBASIC0.41□□□□□ -2.34
Col4a4Q9QZR9 Gm22786-201ENSMUST00000104086 122 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22772-201ENSMUST00000104451 121 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25370-201ENSMUST00000158159 94 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22522-201ENSMUST00000158271 151 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24549-201ENSMUST00000158647 139 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Mir1933-201ENSMUST00000158930 88 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Mir3094-201ENSMUST00000175121 64 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25098-201ENSMUST00000177580 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm23356-201ENSMUST00000177610 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24027-201ENSMUST00000177611 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22511-201ENSMUST00000177628 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22630-201ENSMUST00000177781 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm23560-201ENSMUST00000177782 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25462-201ENSMUST00000177833 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm26059-201ENSMUST00000177865 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22255-201ENSMUST00000177933 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25146-201ENSMUST00000177976 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25523-201ENSMUST00000178044 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24585-201ENSMUST00000178104 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22627-201ENSMUST00000178127 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22912-201ENSMUST00000178242 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24866-201ENSMUST00000178338 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22524-201ENSMUST00000178357 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25710-201ENSMUST00000178367 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm23575-201ENSMUST00000178406 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24872-201ENSMUST00000178434 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22449-201ENSMUST00000178924 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24702-201ENSMUST00000178965 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24206-201ENSMUST00000179011 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24528-201ENSMUST00000179164 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm22909-201ENSMUST00000179190 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm26334-201ENSMUST00000179403 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25463-201ENSMUST00000179405 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25742-201ENSMUST00000179530 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25209-201ENSMUST00000179576 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm26392-201ENSMUST00000179661 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25230-201ENSMUST00000179740 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm26434-201ENSMUST00000179778 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm25741-201ENSMUST00000179825 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24759-201ENSMUST00000179827 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm24219-201ENSMUST00000179861 79 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Gm27297-201ENSMUST00000183395 105 ntBASIC0.4□□□□□ -2.34
Col4a4Q9QZR9 Mir7010-201ENSMUST00000183464 63 ntBASIC0.4□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 155.7 ms