Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm23221-201ENSMUST00000158118 93 ntBASIC1.31□□□□□ -2.2
Ldb3Q9JKS4 Gm36956-201ENSMUST00000193830 214 ntBASIC1.31□□□□□ -2.2
Ldb3Q9JKS4 Gm44962-201ENSMUST00000206460 279 ntBASIC1.31□□□□□ -2.2
Ldb3Q9JKS4 Gm25832-201ENSMUST00000104140 130 ntBASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 Gm23130-201ENSMUST00000104252 74 ntBASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 Gm25541-201ENSMUST00000116888 126 ntBASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 Gm22205-201ENSMUST00000122655 71 ntBASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 Gm24895-201ENSMUST00000122742 74 ntBASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 Gm22556-201ENSMUST00000157803 100 ntBASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 Gm27493-201ENSMUST00000184128 78 ntBASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 Mir324-201ENSMUST00000083600 89 ntBASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
Ldb3Q9JKS4 Gm24009-201ENSMUST00000157734 93 ntBASIC1.29□□□□□ -2.2
Ldb3Q9JKS4 Gm22732-201ENSMUST00000158093 121 ntBASIC1.29□□□□□ -2.2
Ldb3Q9JKS4 Gm24946-201ENSMUST00000158332 106 ntBASIC1.29□□□□□ -2.2
Ldb3Q9JKS4 Gm25600-201ENSMUST00000158357 106 ntBASIC1.29□□□□□ -2.2
Ldb3Q9JKS4 Gm24129-201ENSMUST00000158537 97 ntBASIC1.29□□□□□ -2.2
Ldb3Q9JKS4 Gm26712-201ENSMUST00000180813 217 ntBASIC1.29□□□□□ -2.2
Ldb3Q9JKS4 Mir3569-201ENSMUST00000185080 58 ntBASIC1.29□□□□□ -2.2
Ldb3Q9JKS4 Mir5117-201ENSMUST00000083226 84 ntBASIC1.29□□□□□ -2.2
Ldb3Q9JKS4 Gm24162-201ENSMUST00000093665 102 ntBASIC1.29□□□□□ -2.2
Ldb3Q9JKS4 Gm22067-201ENSMUST00000122790 107 ntBASIC1.28□□□□□ -2.2
Ldb3Q9JKS4 Gm25056-201ENSMUST00000157372 62 ntBASIC1.28□□□□□ -2.2
Ldb3Q9JKS4 Gm24547-201ENSMUST00000158649 149 ntBASIC1.28□□□□□ -2.2
Ldb3Q9JKS4 Gm27415-201ENSMUST00000183720 95 ntBASIC1.28□□□□□ -2.2
Ldb3Q9JKS4 Gm38295-201ENSMUST00000191951 151 ntBASIC1.28□□□□□ -2.2
Ldb3Q9JKS4 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.28□□□□□ -2.2
Ldb3Q9JKS4 Gm26224-201ENSMUST00000082506 80 ntBASIC1.28□□□□□ -2.2
Ldb3Q9JKS4 Mir29a-201ENSMUST00000083676 88 ntBASIC1.28□□□□□ -2.2
Ldb3Q9JKS4 Gm37824-201ENSMUST00000193430 3236 ntBASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Mir653-201ENSMUST00000102402 85 ntBASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Gm23011-201ENSMUST00000104148 132 ntBASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Gm24648-201ENSMUST00000157111 132 ntBASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Gm26158-201ENSMUST00000158973 119 ntBASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Gm44408-201ENSMUST00000200205 66 ntBASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Gm23293-201ENSMUST00000082552 104 ntBASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Gm26202-201ENSMUST00000082910 65 ntBASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Gm25644-201ENSMUST00000083209 107 ntBASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
Ldb3Q9JKS4 Mir301b-201ENSMUST00000102333 97 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 Gm23122-201ENSMUST00000157645 103 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 Gm24902-201ENSMUST00000158126 123 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 Mir1950-201ENSMUST00000158526 74 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 Gm25974-201ENSMUST00000158701 94 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 Snora26-201ENSMUST00000175614 121 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 Gm25740-201ENSMUST00000180247 107 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 Gm27265-201ENSMUST00000183559 77 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 Gm27420-201ENSMUST00000183823 79 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 AC157602.1-201ENSMUST00000197446 105 ntBASIC1.26□□□□□ -2.21
Ldb3Q9JKS4 Gm25542-201ENSMUST00000116889 94 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Mup-ps5-201ENSMUST00000118667 99 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm26478-201ENSMUST00000122611 133 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm24064-201ENSMUST00000157486 106 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Mir1933-201ENSMUST00000158930 88 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm23339-201ENSMUST00000158962 139 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Traj60-201ENSMUST00000167781 54 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm25693-201ENSMUST00000175443 85 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm27297-201ENSMUST00000183395 105 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm27993-201ENSMUST00000184362 85 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm43944-201ENSMUST00000205220 120 ntBASIC1.25□□□□□ -2.21
Ldb3Q9JKS4 Gm25322-201ENSMUST00000122556 104 ntBASIC1.24□□□□□ -2.21
Ldb3Q9JKS4 Gm24290-201ENSMUST00000157634 96 ntBASIC1.24□□□□□ -2.21
Ldb3Q9JKS4 Gm24076-201ENSMUST00000158179 94 ntBASIC1.24□□□□□ -2.21
Ldb3Q9JKS4 Gm23289-201ENSMUST00000175615 108 ntBASIC1.24□□□□□ -2.21
Ldb3Q9JKS4 Mir509-201ENSMUST00000196089 75 ntBASIC1.24□□□□□ -2.21
Ldb3Q9JKS4 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
Ldb3Q9JKS4 Gm23056-201ENSMUST00000082803 111 ntBASIC1.24□□□□□ -2.21
Ldb3Q9JKS4 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Ldb3Q9JKS4 Gm26089-201ENSMUST00000157898 107 ntBASIC1.23□□□□□ -2.21
Ldb3Q9JKS4 Gm22522-201ENSMUST00000158271 151 ntBASIC1.23□□□□□ -2.21
Ldb3Q9JKS4 Gm25854-201ENSMUST00000082792 72 ntBASIC1.23□□□□□ -2.21
Ldb3Q9JKS4 Mirlet7a-1-201ENSMUST00000083487 94 ntBASIC1.23□□□□□ -2.21
Ldb3Q9JKS4 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Ldb3Q9JKS4 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.23□□□□□ -2.21
Ldb3Q9JKS4 Mir1187-201ENSMUST00000116936 122 ntBASIC1.22□□□□□ -2.21
Ldb3Q9JKS4 Gm22030-201ENSMUST00000116942 63 ntBASIC1.22□□□□□ -2.21
Ldb3Q9JKS4 Gm27987-201ENSMUST00000184023 93 ntBASIC1.22□□□□□ -2.21
Ldb3Q9JKS4 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.22□□□□□ -2.21
Ldb3Q9JKS4 AC122335.1-201ENSMUST00000217587 175 ntBASIC1.22□□□□□ -2.21
Ldb3Q9JKS4 Mir34c-201ENSMUST00000083653 77 ntBASIC1.22□□□□□ -2.21
Ldb3Q9JKS4 Gm22551-201ENSMUST00000157795 103 ntBASIC1.21□□□□□ -2.22
Ldb3Q9JKS4 Gm22540-201ENSMUST00000158168 117 ntBASIC1.21□□□□□ -2.22
Ldb3Q9JKS4 Gm16399-201ENSMUST00000181423 219 ntBASIC1.21□□□□□ -2.22
Ldb3Q9JKS4 Mir7014-201ENSMUST00000183853 63 ntBASIC1.21□□□□□ -2.22
Ldb3Q9JKS4 Gm27898-201ENSMUST00000183987 80 ntBASIC1.21□□□□□ -2.22
Ldb3Q9JKS4 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Ldb3Q9JKS4 Gm25968-201ENSMUST00000157167 100 ntBASIC1.2□□□□□ -2.22
Ldb3Q9JKS4 Gm43927-201ENSMUST00000204599 117 ntBASIC1.2□□□□□ -2.22
Ldb3Q9JKS4 AC116319.1-201ENSMUST00000227765 222 ntBASIC1.2□□□□□ -2.22
Ldb3Q9JKS4 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.2□□□□□ -2.22
Ldb3Q9JKS4 AC154506.4-201ENSMUST00000224898 3416 ntBASIC1.19□□□□□ -2.22
Ldb3Q9JKS4 B230307C23Rik-201ENSMUST00000113729 192 ntTSL 5 BASIC1.19□□□□□ -2.22
Ldb3Q9JKS4 Gm23301-201ENSMUST00000082713 65 ntBASIC1.19□□□□□ -2.22
Ldb3Q9JKS4 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Mir216b-201ENSMUST00000102363 86 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm25417-201ENSMUST00000104212 131 ntBASIC1.18□□□□□ -2.22
Ldb3Q9JKS4 Gm24988-201ENSMUST00000104460 121 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 150.1 ms