Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Gm44469-201ENSMUST00000198558 79 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Gm26062-201ENSMUST00000083379 107 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC0.33□□□□□ -2.36
Scn5aQ9JJV9 AC116319.1-201ENSMUST00000227765 222 ntBASIC0.32□□□□□ -2.36
Scn5aQ9JJV9 Gm22196-201ENSMUST00000116865 109 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Gm24246-201ENSMUST00000157315 132 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Gm22088-201ENSMUST00000158341 117 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Mir3094-201ENSMUST00000175121 64 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Gm29535-201ENSMUST00000185723 109 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Gm28143-201ENSMUST00000191082 109 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Gm44211-201ENSMUST00000204867 145 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 AC165138.1-201ENSMUST00000226984 270 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Gm23239-201ENSMUST00000083006 181 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Traj61-201ENSMUST00000165025 72 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Gm25894-201ENSMUST00000083458 75 ntBASIC0.31□□□□□ -2.36
Scn5aQ9JJV9 Mir20b-201ENSMUST00000102087 80 ntBASIC0.3□□□□□ -2.36
Scn5aQ9JJV9 Gm12013-201ENSMUST00000121971 155 ntBASIC0.3□□□□□ -2.36
Scn5aQ9JJV9 Gm22706-201ENSMUST00000157907 112 ntBASIC0.3□□□□□ -2.36
Scn5aQ9JJV9 Gm44602-201ENSMUST00000205948 132 ntBASIC0.3□□□□□ -2.36
Scn5aQ9JJV9 Snord95-201ENSMUST00000082846 68 ntBASIC0.3□□□□□ -2.36
Scn5aQ9JJV9 Gm23578-201ENSMUST00000103943 104 ntBASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm23989-201ENSMUST00000117030 66 ntBASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 AC164561.1-201ENSMUST00000220414 115 ntBASIC0.29□□□□□ -2.36
Scn5aQ9JJV9 Gm24009-201ENSMUST00000157734 93 ntBASIC0.28□□□□□ -2.36
Scn5aQ9JJV9 Gm23917-201ENSMUST00000175256 98 ntBASIC0.28□□□□□ -2.36
Scn5aQ9JJV9 AC126939.1-201ENSMUST00000224943 226 ntBASIC0.28□□□□□ -2.36
Scn5aQ9JJV9 Gm45265-201ENSMUST00000210852 2497 ntBASIC0.28□□□□□ -2.36
Scn5aQ9JJV9 Gm25753-201ENSMUST00000116792 121 ntBASIC0.28□□□□□ -2.37
Scn5aQ9JJV9 Gm25370-201ENSMUST00000158159 94 ntBASIC0.28□□□□□ -2.37
Scn5aQ9JJV9 Gm23922-201ENSMUST00000178792 79 ntBASIC0.28□□□□□ -2.37
Scn5aQ9JJV9 Gm24657-201ENSMUST00000180085 79 ntBASIC0.28□□□□□ -2.37
Scn5aQ9JJV9 Gm22996-201ENSMUST00000180236 79 ntBASIC0.28□□□□□ -2.37
Scn5aQ9JJV9 Gm44859-201ENSMUST00000207831 94 ntBASIC0.28□□□□□ -2.37
Scn5aQ9JJV9 Snora75-201ENSMUST00000082903 133 ntBASIC0.28□□□□□ -2.37
Scn5aQ9JJV9 Mir216b-201ENSMUST00000102363 86 ntBASIC0.27□□□□□ -2.37
Scn5aQ9JJV9 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC0.27□□□□□ -2.37
Scn5aQ9JJV9 Gm25618-201ENSMUST00000179484 107 ntBASIC0.27□□□□□ -2.37
Scn5aQ9JJV9 mt-Tv-201ENSMUST00000082389 69 ntBASIC0.27□□□□□ -2.37
Scn5aQ9JJV9 mt-Ts2-201ENSMUST00000082416 59 ntBASIC0.27□□□□□ -2.37
Scn5aQ9JJV9 Mir200a-201ENSMUST00000083466 90 ntBASIC0.27□□□□□ -2.37
Scn5aQ9JJV9 Gm24793-201ENSMUST00000104289 132 ntBASIC0.26□□□□□ -2.37
Scn5aQ9JJV9 Gm22962-201ENSMUST00000157962 73 ntBASIC0.26□□□□□ -2.37
Scn5aQ9JJV9 Gm24500-201ENSMUST00000158447 124 ntBASIC0.26□□□□□ -2.37
Scn5aQ9JJV9 Mir710-201ENSMUST00000102088 110 ntBASIC0.26□□□□□ -2.37
Scn5aQ9JJV9 AC156794.1-201ENSMUST00000214415 214 ntTSL 5 BASIC0.26□□□□□ -2.37
Scn5aQ9JJV9 Gm382-201ENSMUST00000096332 4070 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Scn5aQ9JJV9 Gm11749-201ENSMUST00000127327 184 ntTSL 2 BASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Gm23036-201ENSMUST00000157885 99 ntBASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Gm24842-201ENSMUST00000158681 54 ntBASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Gm2077-201ENSMUST00000195017 319 ntBASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 CT009723.2-201ENSMUST00000215702 124 ntTSL 5 BASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Mir3473d-201ENSMUST00000175346 81 ntBASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Gm25693-201ENSMUST00000175443 85 ntBASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Mir6342-201ENSMUST00000183870 125 ntBASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 AC157602.1-201ENSMUST00000197446 105 ntBASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Mir1949-202ENSMUST00000199259 70 ntBASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Traj49-202ENSMUST00000199452 62 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Scn5aQ9JJV9 Gm26133-201ENSMUST00000157363 100 ntBASIC0.24□□□□□ -2.37
Scn5aQ9JJV9 Gm24903-201ENSMUST00000158131 126 ntBASIC0.24□□□□□ -2.37
Scn5aQ9JJV9 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC0.24□□□□□ -2.37
Scn5aQ9JJV9 Gm26454-201ENSMUST00000082682 107 ntBASIC0.24□□□□□ -2.37
Scn5aQ9JJV9 Gm25040-201ENSMUST00000103877 66 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm23531-201ENSMUST00000104567 68 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Mir3089-201ENSMUST00000175350 84 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm24256-201ENSMUST00000083696 84 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm22368-201ENSMUST00000102416 109 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm12086-201ENSMUST00000120863 228 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm23900-201ENSMUST00000157569 108 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm22520-201ENSMUST00000158269 129 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Mir6365-201ENSMUST00000183990 101 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm38295-201ENSMUST00000191951 151 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm44457-201ENSMUST00000198109 76 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm24524-201ENSMUST00000082925 170 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm23344-201ENSMUST00000083818 68 ntBASIC0.23□□□□□ -2.37
Scn5aQ9JJV9 Gm25885-201ENSMUST00000157779 109 ntBASIC0.22□□□□□ -2.37
Scn5aQ9JJV9 Gm22788-201ENSMUST00000157876 61 ntBASIC0.22□□□□□ -2.37
Scn5aQ9JJV9 Gm22239-201ENSMUST00000175220 103 ntBASIC0.22□□□□□ -2.37
Scn5aQ9JJV9 Gm26168-201ENSMUST00000083787 112 ntBASIC0.22□□□□□ -2.37
Scn5aQ9JJV9 Gm25006-201ENSMUST00000083813 107 ntBASIC0.22□□□□□ -2.37
Scn5aQ9JJV9 Gm24796-201ENSMUST00000104007 107 ntBASIC0.21□□□□□ -2.38
Scn5aQ9JJV9 Gm25425-201ENSMUST00000157611 96 ntBASIC0.21□□□□□ -2.38
Scn5aQ9JJV9 Gm23065-201ENSMUST00000158236 130 ntBASIC0.21□□□□□ -2.38
Scn5aQ9JJV9 Gm44328-201ENSMUST00000199331 75 ntBASIC0.21□□□□□ -2.38
Scn5aQ9JJV9 Gm43907-201ENSMUST00000203128 117 ntBASIC0.21□□□□□ -2.38
Scn5aQ9JJV9 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.21□□□□□ -2.38
Scn5aQ9JJV9 Gm23749-201ENSMUST00000104223 131 ntBASIC0.21□□□□□ -2.38
Scn5aQ9JJV9 Gm26303-201ENSMUST00000116845 119 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 188.2 ms